GSE44583 Processing Pipeline

GSE code_examples 4 steps

Publication

Genome-wide analysis reveals SR protein cooperation and competition in regulated splicing.

Molecular cell (2013) — PMID 23562324

Dataset

GSE44583

Genome-wide Analysis Reveals SR Protein Cooperation and Competition in Regulated Splicing

Warning: Pipeline descriptions and code snippets may be inferred or AI-generated. Use them only as a starting point to guide analysis, and validate before use.

Processing Steps

Generate Jupyter Notebook
  1. 1

    Affymetrix package (Affy Power Tools) apt-probeset-summarize.

    Microarray
  2. 2

    Iter-plier algorithm used to quantify probesets.

  3. 3

    GPL13185_mjay.pgf

  4. 4

    GPL13185_mjay.clf

Tools Used

Microarray
Raw Source Text 
Affymetrix package (Affy Power Tools) apt-probeset-summarize. Iter-plier algorithm used to quantify probesets.
GPL13185_mjay.pgf
GPL13185_mjay.clf
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