GSE275133 Processing Pipeline

GSE code_examples 2 steps

Publication

Single-cell and isoform-specific translational profiling of the mouse brain.

Nature (2026) — PMID 41708856

Dataset

GSE275133

Single cell and isoform-specific translational profiling of the mouse brain [Bulk RNA-seq]

Warning: Pipeline descriptions and code snippets may be inferred or AI-generated. Use them only as a starting point to guide analysis, and validate before use.

Processing Steps

Generate Jupyter Notebook
  1. 1

    reads were mapped using STARv2.7.6a

  2. 2

    counts were compiled with subread featureCounts

    featureCounts
Raw Source Text 
reads were mapped using STARv2.7.6a
counts were compiled with subread featureCounts
Assembly: mm10
Supplementary files format and content: .txt files with featurecounts counts per gene
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