GSE136912
GSE GEOEndothelial-AGO1-knockout (EC-AGO1-KO) mice and wild-type (WT) littermates
Organism:
Mus musculus
Platform:
GPL11154
Samples:
30
Experiment Types:
Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
Submitted:
Sep 05 2019
Last Updated:
Jul 05 2022
Status:
Public on Sep 06 2019
Contact:
Sheng,,Zhong (University of California, San Diego)
Relations
SuperSeries of: GSE136907
SuperSeries of: GSE136908
SuperSeries of: GSE136910
SuperSeries of: GSE136911
BioProject: https://www.ncbi.nlm.nih.gov/bioproject/PRJNA564021
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall Design
Refer to individual Series
Analysis (2 steps)
View Data Processing
Processing steps for GSE136912
- CLIPSeqTool0.1.8 was used to trim the adapaters, align the reads to the genome and perform deduplications
- Kallisto0.44.0 was used to quantify transcripts abundance in terms of TPM
Supplementary Files (1)
GSE136912_RAW.tar
Download
GEO Samples (30)
GSM4061740
GSM4061741
GSM4061742
GSM4061743
GSM4061744
GSM4061745
GSM4061746
GSM4061747
GSM4061748
GSM4061749
GSM4061750
GSM4061751
GSM4061752
GSM4061753
GSM4061754
GSM4061755
GSM4061756
GSM4061757
GSM4061758
GSM4061759
GSM4061760
GSM4061761
GSM4061762
GSM4061763
GSM4061764
GSM4061765
GSM4061766
GSM4061767
GSM4061768
GSM4061769
Dataset Citations (1)
Suppression of Endothelial AGO1 Promotes Adipose Tissue Browning and Improves Metabolic Dysfunction.
PMID 32393053
· 2020
· Circulation
Xiaofang Tang, Yifei Miao, Yingjun Luo, Kiran Sriram, Zhijie Qi, Feng-Mao Lin, Yusu Gu, Chih-Hung Lai, Chien-Yi Hsu, Kirk L Peterson, Kendall Van Keuren-Jensen, Patrick T Fueger, Gene W Yeo, Rama Natarajan, Sheng Zhong, Zhen Bouman Chen