#!/usr/bin/env bash
# Bulk download script for GSE72509
# Generated from Yeo Lab Publications Database
# Total files: 237

OUTDIR="GSE72509"
mkdir -p "$OUTDIR"
cd "$OUTDIR"

# --- GEO supplementary files ---
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE72nnn/GSE72509/suppl/GSE72509_SLE_RPKMs.txt.gz" -O "GSE72509_SLE_RPKMs.txt.gz"

# --- SRA run files ---
# Tip: use 'fasterq-dump' from SRA Toolkit for FASTQ conversion
#      with optional renaming to original submitted FASTQ names.
# Set to 1 to rename SRR outputs (e.g. SRR_1.fastq.gz -> sample_R1.fastq.gz)
RENAME_SRA_TO_ORIGINAL=1

_compress_if_exists() {
  local stem="$1"
  if [ -f "${stem}.fastq" ]; then
    gzip -f "${stem}.fastq"
    echo "${stem}.fastq.gz"
    return 0
  fi
  if [ -f "${stem}.fq" ]; then
    gzip -f "${stem}.fq"
    echo "${stem}.fq.gz"
    return 0
  fi
  return 1
}

# Option A: Download via SRA Toolkit (recommended)
fasterq-dump --split-files "SRR2443147"
gz1="$(_compress_if_exists 'SRR2443147_1' || true)"
gz2="$(_compress_if_exists 'SRR2443147_2' || true)"
gzs="$(_compress_if_exists 'SRR2443147' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10031_SAM8749913_L4_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443148"
gz1="$(_compress_if_exists 'SRR2443148_1' || true)"
gz2="$(_compress_if_exists 'SRR2443148_2' || true)"
gzs="$(_compress_if_exists 'SRR2443148' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10014_SAM8749896_L3_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443149"
gz1="$(_compress_if_exists 'SRR2443149_1' || true)"
gz2="$(_compress_if_exists 'SRR2443149_2' || true)"
gzs="$(_compress_if_exists 'SRR2443149' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10133_SAM8750015_L4_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443150"
gz1="$(_compress_if_exists 'SRR2443150_1' || true)"
gz2="$(_compress_if_exists 'SRR2443150_2' || true)"
gzs="$(_compress_if_exists 'SRR2443150' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10106_SAM8749988_L2_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443151"
gz1="$(_compress_if_exists 'SRR2443151_1' || true)"
gz2="$(_compress_if_exists 'SRR2443151_2' || true)"
gzs="$(_compress_if_exists 'SRR2443151' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB11110_SAM9260122_L2_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443152"
gz1="$(_compress_if_exists 'SRR2443152_1' || true)"
gz2="$(_compress_if_exists 'SRR2443152_2' || true)"
gzs="$(_compress_if_exists 'SRR2443152' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10101_SAM8749983_L1_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443153"
gz1="$(_compress_if_exists 'SRR2443153_1' || true)"
gz2="$(_compress_if_exists 'SRR2443153_2' || true)"
gzs="$(_compress_if_exists 'SRR2443153' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10215_SAM8750097_L7_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443154"
gz1="$(_compress_if_exists 'SRR2443154_1' || true)"
gz2="$(_compress_if_exists 'SRR2443154_2' || true)"
gzs="$(_compress_if_exists 'SRR2443154' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10261_SAM8750143_L6_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443155"
gz1="$(_compress_if_exists 'SRR2443155_1' || true)"
gz2="$(_compress_if_exists 'SRR2443155_2' || true)"
gzs="$(_compress_if_exists 'SRR2443155' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10130_SAM8750012_L2_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443156"
gz1="$(_compress_if_exists 'SRR2443156_1' || true)"
gz2="$(_compress_if_exists 'SRR2443156_2' || true)"
gzs="$(_compress_if_exists 'SRR2443156' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10120_SAM8750002_L1_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443157"
gz1="$(_compress_if_exists 'SRR2443157_1' || true)"
gz2="$(_compress_if_exists 'SRR2443157_2' || true)"
gzs="$(_compress_if_exists 'SRR2443157' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10005_SAM8749887_L1_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443158"
gz1="$(_compress_if_exists 'SRR2443158_1' || true)"
gz2="$(_compress_if_exists 'SRR2443158_2' || true)"
gzs="$(_compress_if_exists 'SRR2443158' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10071_SAM8749953_L2_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443159"
gz1="$(_compress_if_exists 'SRR2443159_1' || true)"
gz2="$(_compress_if_exists 'SRR2443159_2' || true)"
gzs="$(_compress_if_exists 'SRR2443159' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10085_SAM8749967_L8_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443160"
gz1="$(_compress_if_exists 'SRR2443160_1' || true)"
gz2="$(_compress_if_exists 'SRR2443160_2' || true)"
gzs="$(_compress_if_exists 'SRR2443160' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10221_SAM8750103_L2_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443161"
gz1="$(_compress_if_exists 'SRR2443161_1' || true)"
gz2="$(_compress_if_exists 'SRR2443161_2' || true)"
gzs="$(_compress_if_exists 'SRR2443161' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10226_SAM8750108_L3_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443162"
gz1="$(_compress_if_exists 'SRR2443162_1' || true)"
gz2="$(_compress_if_exists 'SRR2443162_2' || true)"
gzs="$(_compress_if_exists 'SRR2443162' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10205_SAM8750087_L2_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443163"
gz1="$(_compress_if_exists 'SRR2443163_1' || true)"
gz2="$(_compress_if_exists 'SRR2443163_2' || true)"
gzs="$(_compress_if_exists 'SRR2443163' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10063_SAM8749945_L7_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443164"
gz1="$(_compress_if_exists 'SRR2443164_1' || true)"
gz2="$(_compress_if_exists 'SRR2443164_2' || true)"
gzs="$(_compress_if_exists 'SRR2443164' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10726_SAM9103793_L1_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443165"
gz1="$(_compress_if_exists 'SRR2443165_1' || true)"
gz2="$(_compress_if_exists 'SRR2443165_2' || true)"
gzs="$(_compress_if_exists 'SRR2443165' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10098_SAM8749980_L3_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443166"
gz1="$(_compress_if_exists 'SRR2443166_1' || true)"
gz2="$(_compress_if_exists 'SRR2443166_2' || true)"
gzs="$(_compress_if_exists 'SRR2443166' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10163_SAM8750045_L2_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443167"
gz1="$(_compress_if_exists 'SRR2443167_1' || true)"
gz2="$(_compress_if_exists 'SRR2443167_2' || true)"
gzs="$(_compress_if_exists 'SRR2443167' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB11106_SAM9260118_L2_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443168"
gz1="$(_compress_if_exists 'SRR2443168_1' || true)"
gz2="$(_compress_if_exists 'SRR2443168_2' || true)"
gzs="$(_compress_if_exists 'SRR2443168' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10040_SAM8749922_L2_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443169"
gz1="$(_compress_if_exists 'SRR2443169_1' || true)"
gz2="$(_compress_if_exists 'SRR2443169_2' || true)"
gzs="$(_compress_if_exists 'SRR2443169' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10066_SAM8749948_L2_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443170"
gz1="$(_compress_if_exists 'SRR2443170_1' || true)"
gz2="$(_compress_if_exists 'SRR2443170_2' || true)"
gzs="$(_compress_if_exists 'SRR2443170' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10074_SAM8749956_L3_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443171"
gz1="$(_compress_if_exists 'SRR2443171_1' || true)"
gz2="$(_compress_if_exists 'SRR2443171_2' || true)"
gzs="$(_compress_if_exists 'SRR2443171' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10060_SAM8749942_L4_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443172"
gz1="$(_compress_if_exists 'SRR2443172_1' || true)"
gz2="$(_compress_if_exists 'SRR2443172_2' || true)"
gzs="$(_compress_if_exists 'SRR2443172' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10025_SAM8749907_L1_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443173"
gz1="$(_compress_if_exists 'SRR2443173_1' || true)"
gz2="$(_compress_if_exists 'SRR2443173_2' || true)"
gzs="$(_compress_if_exists 'SRR2443173' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10104_SAM8749986_L6_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443174"
gz1="$(_compress_if_exists 'SRR2443174_1' || true)"
gz2="$(_compress_if_exists 'SRR2443174_2' || true)"
gzs="$(_compress_if_exists 'SRR2443174' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10123_SAM8750005_L7_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443175"
gz1="$(_compress_if_exists 'SRR2443175_1' || true)"
gz2="$(_compress_if_exists 'SRR2443175_2' || true)"
gzs="$(_compress_if_exists 'SRR2443175' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10284_SAM8750166_L1_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443176"
gz1="$(_compress_if_exists 'SRR2443176_1' || true)"
gz2="$(_compress_if_exists 'SRR2443176_2' || true)"
gzs="$(_compress_if_exists 'SRR2443176' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10188_SAM8750070_L3_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443177"
gz1="$(_compress_if_exists 'SRR2443177_1' || true)"
gz2="$(_compress_if_exists 'SRR2443177_2' || true)"
gzs="$(_compress_if_exists 'SRR2443177' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10135_SAM8750017_L6_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443178"
gz1="$(_compress_if_exists 'SRR2443178_1' || true)"
gz2="$(_compress_if_exists 'SRR2443178_2' || true)"
gzs="$(_compress_if_exists 'SRR2443178' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10229_SAM8750111_L1_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443179"
gz1="$(_compress_if_exists 'SRR2443179_1' || true)"
gz2="$(_compress_if_exists 'SRR2443179_2' || true)"
gzs="$(_compress_if_exists 'SRR2443179' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10722_SAM9103789_L3_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443180"
gz1="$(_compress_if_exists 'SRR2443180_1' || true)"
gz2="$(_compress_if_exists 'SRR2443180_2' || true)"
gzs="$(_compress_if_exists 'SRR2443180' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10141_SAM8750023_L4_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443181"
gz1="$(_compress_if_exists 'SRR2443181_1' || true)"
gz2="$(_compress_if_exists 'SRR2443181_2' || true)"
gzs="$(_compress_if_exists 'SRR2443181' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10096_SAM8749978_L3_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443182"
gz1="$(_compress_if_exists 'SRR2443182_1' || true)"
gz2="$(_compress_if_exists 'SRR2443182_2' || true)"
gzs="$(_compress_if_exists 'SRR2443182' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10242_SAM8750124_L1_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443183"
gz1="$(_compress_if_exists 'SRR2443183_1' || true)"
gz2="$(_compress_if_exists 'SRR2443183_2' || true)"
gzs="$(_compress_if_exists 'SRR2443183' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10146_SAM8750028_L2_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443184"
gz1="$(_compress_if_exists 'SRR2443184_1' || true)"
gz2="$(_compress_if_exists 'SRR2443184_2' || true)"
gzs="$(_compress_if_exists 'SRR2443184' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10076_SAM8749958_L5_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443185"
gz1="$(_compress_if_exists 'SRR2443185_1' || true)"
gz2="$(_compress_if_exists 'SRR2443185_2' || true)"
gzs="$(_compress_if_exists 'SRR2443185' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10181_SAM8750063_L6_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443186"
gz1="$(_compress_if_exists 'SRR2443186_1' || true)"
gz2="$(_compress_if_exists 'SRR2443186_2' || true)"
gzs="$(_compress_if_exists 'SRR2443186' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10091_SAM8749973_L3_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443187"
gz1="$(_compress_if_exists 'SRR2443187_1' || true)"
gz2="$(_compress_if_exists 'SRR2443187_2' || true)"
gzs="$(_compress_if_exists 'SRR2443187' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10256_SAM8750138_L2_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443188"
gz1="$(_compress_if_exists 'SRR2443188_1' || true)"
gz2="$(_compress_if_exists 'SRR2443188_2' || true)"
gzs="$(_compress_if_exists 'SRR2443188' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10208_SAM8750090_L2_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443189"
gz1="$(_compress_if_exists 'SRR2443189_1' || true)"
gz2="$(_compress_if_exists 'SRR2443189_2' || true)"
gzs="$(_compress_if_exists 'SRR2443189' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10048_SAM8749930_L4_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443190"
gz1="$(_compress_if_exists 'SRR2443190_1' || true)"
gz2="$(_compress_if_exists 'SRR2443190_2' || true)"
gzs="$(_compress_if_exists 'SRR2443190' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10158_SAM8750040_L4_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443191"
gz1="$(_compress_if_exists 'SRR2443191_1' || true)"
gz2="$(_compress_if_exists 'SRR2443191_2' || true)"
gzs="$(_compress_if_exists 'SRR2443191' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10194_SAM8750076_L3_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443192"
gz1="$(_compress_if_exists 'SRR2443192_1' || true)"
gz2="$(_compress_if_exists 'SRR2443192_2' || true)"
gzs="$(_compress_if_exists 'SRR2443192' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10045_SAM8749927_L3_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443193"
gz1="$(_compress_if_exists 'SRR2443193_1' || true)"
gz2="$(_compress_if_exists 'SRR2443193_2' || true)"
gzs="$(_compress_if_exists 'SRR2443193' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10037_SAM8749919_L3_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443194"
gz1="$(_compress_if_exists 'SRR2443194_1' || true)"
gz2="$(_compress_if_exists 'SRR2443194_2' || true)"
gzs="$(_compress_if_exists 'SRR2443194' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10138_SAM8750020_L1_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443195"
gz1="$(_compress_if_exists 'SRR2443195_1' || true)"
gz2="$(_compress_if_exists 'SRR2443195_2' || true)"
gzs="$(_compress_if_exists 'SRR2443195' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10237_SAM8750119_L2_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443196"
gz1="$(_compress_if_exists 'SRR2443196_1' || true)"
gz2="$(_compress_if_exists 'SRR2443196_2' || true)"
gzs="$(_compress_if_exists 'SRR2443196' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10234_SAM8750116_L7_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443197"
gz1="$(_compress_if_exists 'SRR2443197_1' || true)"
gz2="$(_compress_if_exists 'SRR2443197_2' || true)"
gzs="$(_compress_if_exists 'SRR2443197' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10218_SAM8750100_L3_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443198"
gz1="$(_compress_if_exists 'SRR2443198_1' || true)"
gz2="$(_compress_if_exists 'SRR2443198_2' || true)"
gzs="$(_compress_if_exists 'SRR2443198' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10202_SAM8750084_L5_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443199"
gz1="$(_compress_if_exists 'SRR2443199_1' || true)"
gz2="$(_compress_if_exists 'SRR2443199_2' || true)"
gzs="$(_compress_if_exists 'SRR2443199' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10019_SAM8749901_L2_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443200"
gz1="$(_compress_if_exists 'SRR2443200_1' || true)"
gz2="$(_compress_if_exists 'SRR2443200_2' || true)"
gzs="$(_compress_if_exists 'SRR2443200' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10250_SAM8750132_L4_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443201"
gz1="$(_compress_if_exists 'SRR2443201_1' || true)"
gz2="$(_compress_if_exists 'SRR2443201_2' || true)"
gzs="$(_compress_if_exists 'SRR2443201' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10185_SAM8750067_L5_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443202"
gz1="$(_compress_if_exists 'SRR2443202_1' || true)"
gz2="$(_compress_if_exists 'SRR2443202_2' || true)"
gzs="$(_compress_if_exists 'SRR2443202' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10278_SAM8750160_L3_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443203"
gz1="$(_compress_if_exists 'SRR2443203_1' || true)"
gz2="$(_compress_if_exists 'SRR2443203_2' || true)"
gzs="$(_compress_if_exists 'SRR2443203' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10275_SAM8750157_L7_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443204"
gz1="$(_compress_if_exists 'SRR2443204_1' || true)"
gz2="$(_compress_if_exists 'SRR2443204_2' || true)"
gzs="$(_compress_if_exists 'SRR2443204' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10169_SAM8750051_L3_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443205"
gz1="$(_compress_if_exists 'SRR2443205_1' || true)"
gz2="$(_compress_if_exists 'SRR2443205_2' || true)"
gzs="$(_compress_if_exists 'SRR2443205' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10109_SAM8749991_L4_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443206"
gz1="$(_compress_if_exists 'SRR2443206_1' || true)"
gz2="$(_compress_if_exists 'SRR2443206_2' || true)"
gzs="$(_compress_if_exists 'SRR2443206' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10224_SAM8750106_L6_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443207"
gz1="$(_compress_if_exists 'SRR2443207_1' || true)"
gz2="$(_compress_if_exists 'SRR2443207_2' || true)"
gzs="$(_compress_if_exists 'SRR2443207' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10088_SAM8749970_L1_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443208"
gz1="$(_compress_if_exists 'SRR2443208_1' || true)"
gz2="$(_compress_if_exists 'SRR2443208_2' || true)"
gzs="$(_compress_if_exists 'SRR2443208' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10258_SAM8750140_L3_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443209"
gz1="$(_compress_if_exists 'SRR2443209_1' || true)"
gz2="$(_compress_if_exists 'SRR2443209_2' || true)"
gzs="$(_compress_if_exists 'SRR2443209' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10011_SAM8749893_L2_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443210"
gz1="$(_compress_if_exists 'SRR2443210_1' || true)"
gz2="$(_compress_if_exists 'SRR2443210_2' || true)"
gzs="$(_compress_if_exists 'SRR2443210' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10183_SAM8750065_L3_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443211"
gz1="$(_compress_if_exists 'SRR2443211_1' || true)"
gz2="$(_compress_if_exists 'SRR2443211_2' || true)"
gzs="$(_compress_if_exists 'SRR2443211' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10143_SAM8750025_L1_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443212"
gz1="$(_compress_if_exists 'SRR2443212_1' || true)"
gz2="$(_compress_if_exists 'SRR2443212_2' || true)"
gzs="$(_compress_if_exists 'SRR2443212' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10057_SAM8749939_L2_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443213"
gz1="$(_compress_if_exists 'SRR2443213_1' || true)"
gz2="$(_compress_if_exists 'SRR2443213_2' || true)"
gzs="$(_compress_if_exists 'SRR2443213' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10191_SAM8750073_L7_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443214"
gz1="$(_compress_if_exists 'SRR2443214_1' || true)"
gz2="$(_compress_if_exists 'SRR2443214_2' || true)"
gzs="$(_compress_if_exists 'SRR2443214' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10166_SAM8750048_L3_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443215"
gz1="$(_compress_if_exists 'SRR2443215_1' || true)"
gz2="$(_compress_if_exists 'SRR2443215_2' || true)"
gzs="$(_compress_if_exists 'SRR2443215' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10068_SAM8749950_L3_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443216"
gz1="$(_compress_if_exists 'SRR2443216_1' || true)"
gz2="$(_compress_if_exists 'SRR2443216_2' || true)"
gzs="$(_compress_if_exists 'SRR2443216' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10178_SAM8750060_L2_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443217"
gz1="$(_compress_if_exists 'SRR2443217_1' || true)"
gz2="$(_compress_if_exists 'SRR2443217_2' || true)"
gzs="$(_compress_if_exists 'SRR2443217' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10287_SAM8750169_L2_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443218"
gz1="$(_compress_if_exists 'SRR2443218_1' || true)"
gz2="$(_compress_if_exists 'SRR2443218_2' || true)"
gzs="$(_compress_if_exists 'SRR2443218' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10725_SAM9103792_L4_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443219"
gz1="$(_compress_if_exists 'SRR2443219_1' || true)"
gz2="$(_compress_if_exists 'SRR2443219_2' || true)"
gzs="$(_compress_if_exists 'SRR2443219' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10247_SAM8750129_L4_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443220"
gz1="$(_compress_if_exists 'SRR2443220_1' || true)"
gz2="$(_compress_if_exists 'SRR2443220_2' || true)"
gzs="$(_compress_if_exists 'SRR2443220' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10172_SAM8750054_L3_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443221"
gz1="$(_compress_if_exists 'SRR2443221_1' || true)"
gz2="$(_compress_if_exists 'SRR2443221_2' || true)"
gzs="$(_compress_if_exists 'SRR2443221' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10042_SAM8749924_L1_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443222"
gz1="$(_compress_if_exists 'SRR2443222_1' || true)"
gz2="$(_compress_if_exists 'SRR2443222_2' || true)"
gzs="$(_compress_if_exists 'SRR2443222' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10051_SAM8749933_L2_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443223"
gz1="$(_compress_if_exists 'SRR2443223_1' || true)"
gz2="$(_compress_if_exists 'SRR2443223_2' || true)"
gzs="$(_compress_if_exists 'SRR2443223' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10253_SAM8750135_L7_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443224"
gz1="$(_compress_if_exists 'SRR2443224_1' || true)"
gz2="$(_compress_if_exists 'SRR2443224_2' || true)"
gzs="$(_compress_if_exists 'SRR2443224' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10093_SAM8749975_L2_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443225"
gz1="$(_compress_if_exists 'SRR2443225_1' || true)"
gz2="$(_compress_if_exists 'SRR2443225_2' || true)"
gzs="$(_compress_if_exists 'SRR2443225' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10128_SAM8750010_L1_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443226"
gz1="$(_compress_if_exists 'SRR2443226_1' || true)"
gz2="$(_compress_if_exists 'SRR2443226_2' || true)"
gzs="$(_compress_if_exists 'SRR2443226' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10054_SAM8749936_L1_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443227"
gz1="$(_compress_if_exists 'SRR2443227_1' || true)"
gz2="$(_compress_if_exists 'SRR2443227_2' || true)"
gzs="$(_compress_if_exists 'SRR2443227' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10008_SAM8749890_L1_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443228"
gz1="$(_compress_if_exists 'SRR2443228_1' || true)"
gz2="$(_compress_if_exists 'SRR2443228_2' || true)"
gzs="$(_compress_if_exists 'SRR2443228' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10222_SAM8750104_L2_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443229"
gz1="$(_compress_if_exists 'SRR2443229_1' || true)"
gz2="$(_compress_if_exists 'SRR2443229_2' || true)"
gzs="$(_compress_if_exists 'SRR2443229' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10268_SAM8750150_L2_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443230"
gz1="$(_compress_if_exists 'SRR2443230_1' || true)"
gz2="$(_compress_if_exists 'SRR2443230_2' || true)"
gzs="$(_compress_if_exists 'SRR2443230' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10125_SAM8750007_L1_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443231"
gz1="$(_compress_if_exists 'SRR2443231_1' || true)"
gz2="$(_compress_if_exists 'SRR2443231_2' || true)"
gzs="$(_compress_if_exists 'SRR2443231' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10153_SAM8750035_L3_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443232"
gz1="$(_compress_if_exists 'SRR2443232_1' || true)"
gz2="$(_compress_if_exists 'SRR2443232_2' || true)"
gzs="$(_compress_if_exists 'SRR2443232' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10112_SAM8749994_L5_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443233"
gz1="$(_compress_if_exists 'SRR2443233_1' || true)"
gz2="$(_compress_if_exists 'SRR2443233_2' || true)"
gzs="$(_compress_if_exists 'SRR2443233' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10231_SAM8750113_L4_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443234"
gz1="$(_compress_if_exists 'SRR2443234_1' || true)"
gz2="$(_compress_if_exists 'SRR2443234_2' || true)"
gzs="$(_compress_if_exists 'SRR2443234' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10240_SAM8750122_L2_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443235"
gz1="$(_compress_if_exists 'SRR2443235_1' || true)"
gz2="$(_compress_if_exists 'SRR2443235_2' || true)"
gzs="$(_compress_if_exists 'SRR2443235' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10115_SAM8749997_L1_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443236"
gz1="$(_compress_if_exists 'SRR2443236_1' || true)"
gz2="$(_compress_if_exists 'SRR2443236_2' || true)"
gzs="$(_compress_if_exists 'SRR2443236' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10150_SAM8750032_L4_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443237"
gz1="$(_compress_if_exists 'SRR2443237_1' || true)"
gz2="$(_compress_if_exists 'SRR2443237_2' || true)"
gzs="$(_compress_if_exists 'SRR2443237' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10290_SAM8750172_L2_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443238"
gz1="$(_compress_if_exists 'SRR2443238_1' || true)"
gz2="$(_compress_if_exists 'SRR2443238_2' || true)"
gzs="$(_compress_if_exists 'SRR2443238' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10271_SAM8750153_L2_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443239"
gz1="$(_compress_if_exists 'SRR2443239_1' || true)"
gz2="$(_compress_if_exists 'SRR2443239_2' || true)"
gzs="$(_compress_if_exists 'SRR2443239' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10082_SAM8749964_L6_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443240"
gz1="$(_compress_if_exists 'SRR2443240_1' || true)"
gz2="$(_compress_if_exists 'SRR2443240_2' || true)"
gzs="$(_compress_if_exists 'SRR2443240' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10213_SAM8750095_L3_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443241"
gz1="$(_compress_if_exists 'SRR2443241_1' || true)"
gz2="$(_compress_if_exists 'SRR2443241_2' || true)"
gzs="$(_compress_if_exists 'SRR2443241' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10199_SAM8750081_L5_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443242"
gz1="$(_compress_if_exists 'SRR2443242_1' || true)"
gz2="$(_compress_if_exists 'SRR2443242_2' || true)"
gzs="$(_compress_if_exists 'SRR2443242' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10022_SAM8749904_L1_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443243"
gz1="$(_compress_if_exists 'SRR2443243_1' || true)"
gz2="$(_compress_if_exists 'SRR2443243_2' || true)"
gzs="$(_compress_if_exists 'SRR2443243' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10034_SAM8749916_L2_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443244"
gz1="$(_compress_if_exists 'SRR2443244_1' || true)"
gz2="$(_compress_if_exists 'SRR2443244_2' || true)"
gzs="$(_compress_if_exists 'SRR2443244' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10281_SAM8750163_L3_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443245"
gz1="$(_compress_if_exists 'SRR2443245_1' || true)"
gz2="$(_compress_if_exists 'SRR2443245_2' || true)"
gzs="$(_compress_if_exists 'SRR2443245' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10175_SAM8750057_L1_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443246"
gz1="$(_compress_if_exists 'SRR2443246_1' || true)"
gz2="$(_compress_if_exists 'SRR2443246_2' || true)"
gzs="$(_compress_if_exists 'SRR2443246' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10311_SAM8750193_L1_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443247"
gz1="$(_compress_if_exists 'SRR2443247_1' || true)"
gz2="$(_compress_if_exists 'SRR2443247_2' || true)"
gzs="$(_compress_if_exists 'SRR2443247' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10293_SAM8750175_L1_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443248"
gz1="$(_compress_if_exists 'SRR2443248_1' || true)"
gz2="$(_compress_if_exists 'SRR2443248_2' || true)"
gzs="$(_compress_if_exists 'SRR2443248' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10310_SAM8750192_L2_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443249"
gz1="$(_compress_if_exists 'SRR2443249_1' || true)"
gz2="$(_compress_if_exists 'SRR2443249_2' || true)"
gzs="$(_compress_if_exists 'SRR2443249' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10297_SAM8750179_L7_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443250"
gz1="$(_compress_if_exists 'SRR2443250_1' || true)"
gz2="$(_compress_if_exists 'SRR2443250_2' || true)"
gzs="$(_compress_if_exists 'SRR2443250' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10295_SAM8750177_L8_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443251"
gz1="$(_compress_if_exists 'SRR2443251_1' || true)"
gz2="$(_compress_if_exists 'SRR2443251_2' || true)"
gzs="$(_compress_if_exists 'SRR2443251' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10305_SAM8750187_L1_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443252"
gz1="$(_compress_if_exists 'SRR2443252_1' || true)"
gz2="$(_compress_if_exists 'SRR2443252_2' || true)"
gzs="$(_compress_if_exists 'SRR2443252' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10296_SAM8750178_L8_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443253"
gz1="$(_compress_if_exists 'SRR2443253_1' || true)"
gz2="$(_compress_if_exists 'SRR2443253_2' || true)"
gzs="$(_compress_if_exists 'SRR2443253' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10302_SAM8750184_L8_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443254"
gz1="$(_compress_if_exists 'SRR2443254_1' || true)"
gz2="$(_compress_if_exists 'SRR2443254_2' || true)"
gzs="$(_compress_if_exists 'SRR2443254' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10299_SAM8750181_L8_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443255"
gz1="$(_compress_if_exists 'SRR2443255_1' || true)"
gz2="$(_compress_if_exists 'SRR2443255_2' || true)"
gzs="$(_compress_if_exists 'SRR2443255' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10309_SAM8750191_L2_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443256"
gz1="$(_compress_if_exists 'SRR2443256_1' || true)"
gz2="$(_compress_if_exists 'SRR2443256_2' || true)"
gzs="$(_compress_if_exists 'SRR2443256' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10300_SAM8750182_L3_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443257"
gz1="$(_compress_if_exists 'SRR2443257_1' || true)"
gz2="$(_compress_if_exists 'SRR2443257_2' || true)"
gzs="$(_compress_if_exists 'SRR2443257' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10306_SAM8750188_L3_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443258"
gz1="$(_compress_if_exists 'SRR2443258_1' || true)"
gz2="$(_compress_if_exists 'SRR2443258_2' || true)"
gzs="$(_compress_if_exists 'SRR2443258' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10292_SAM8750174_L3_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443259"
gz1="$(_compress_if_exists 'SRR2443259_1' || true)"
gz2="$(_compress_if_exists 'SRR2443259_2' || true)"
gzs="$(_compress_if_exists 'SRR2443259' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10304_SAM8750186_L3_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443260"
gz1="$(_compress_if_exists 'SRR2443260_1' || true)"
gz2="$(_compress_if_exists 'SRR2443260_2' || true)"
gzs="$(_compress_if_exists 'SRR2443260' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10303_SAM8750185_L3_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443261"
gz1="$(_compress_if_exists 'SRR2443261_1' || true)"
gz2="$(_compress_if_exists 'SRR2443261_2' || true)"
gzs="$(_compress_if_exists 'SRR2443261' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10298_SAM8750180_L1_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443262"
gz1="$(_compress_if_exists 'SRR2443262_1' || true)"
gz2="$(_compress_if_exists 'SRR2443262_2' || true)"
gzs="$(_compress_if_exists 'SRR2443262' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10307_SAM8750189_L3_R1.fastq.gz"
fi

fasterq-dump --split-files "SRR2443263"
gz1="$(_compress_if_exists 'SRR2443263_1' || true)"
gz2="$(_compress_if_exists 'SRR2443263_2' || true)"
gzs="$(_compress_if_exists 'SRR2443263' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "LIB10294_SAM8750176_L1_R1.fastq.gz"
fi


# Option B: Direct download (larger .sra files)
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443147/SRR2443147"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443148/SRR2443148"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443149/SRR2443149"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443150/SRR2443150"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443151/SRR2443151"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443152/SRR2443152"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443153/SRR2443153"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443154/SRR2443154"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443155/SRR2443155"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443156/SRR2443156"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443157/SRR2443157"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443158/SRR2443158"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443159/SRR2443159"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443160/SRR2443160"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443161/SRR2443161"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443162/SRR2443162"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443163/SRR2443163"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443164/SRR2443164"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443165/SRR2443165"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443166/SRR2443166"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443167/SRR2443167"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443168/SRR2443168"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443169/SRR2443169"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443170/SRR2443170"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443171/SRR2443171"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443172/SRR2443172"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443173/SRR2443173"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443174/SRR2443174"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443175/SRR2443175"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443176/SRR2443176"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443177/SRR2443177"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443178/SRR2443178"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443179/SRR2443179"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443180/SRR2443180"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443181/SRR2443181"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443182/SRR2443182"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443183/SRR2443183"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443184/SRR2443184"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443185/SRR2443185"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443186/SRR2443186"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443187/SRR2443187"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443188/SRR2443188"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443189/SRR2443189"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443190/SRR2443190"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443191/SRR2443191"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443192/SRR2443192"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443193/SRR2443193"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443194/SRR2443194"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443195/SRR2443195"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443196/SRR2443196"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443197/SRR2443197"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443198/SRR2443198"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443199/SRR2443199"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443200/SRR2443200"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443201/SRR2443201"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443202/SRR2443202"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443203/SRR2443203"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443204/SRR2443204"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443205/SRR2443205"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443206/SRR2443206"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443207/SRR2443207"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443208/SRR2443208"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443209/SRR2443209"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443210/SRR2443210"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443211/SRR2443211"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443212/SRR2443212"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443213/SRR2443213"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443214/SRR2443214"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443215/SRR2443215"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443216/SRR2443216"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443217/SRR2443217"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443218/SRR2443218"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443219/SRR2443219"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443220/SRR2443220"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443221/SRR2443221"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443222/SRR2443222"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443223/SRR2443223"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443224/SRR2443224"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443225/SRR2443225"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443226/SRR2443226"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443227/SRR2443227"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443228/SRR2443228"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443229/SRR2443229"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443230/SRR2443230"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443231/SRR2443231"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443232/SRR2443232"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443233/SRR2443233"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443234/SRR2443234"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443235/SRR2443235"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443236/SRR2443236"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443237/SRR2443237"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443238/SRR2443238"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443239/SRR2443239"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443240/SRR2443240"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443241/SRR2443241"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443242/SRR2443242"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443243/SRR2443243"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443244/SRR2443244"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443245/SRR2443245"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443246/SRR2443246"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443247/SRR2443247"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443248/SRR2443248"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443249/SRR2443249"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443250/SRR2443250"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443251/SRR2443251"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443252/SRR2443252"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443253/SRR2443253"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443254/SRR2443254"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443255/SRR2443255"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443256/SRR2443256"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443257/SRR2443257"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443258/SRR2443258"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443259/SRR2443259"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443260/SRR2443260"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443261/SRR2443261"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443262/SRR2443262"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443263/SRR2443263"

# --- Additional data files ---
curl -L -O -C - "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos5/sra-pub-zq-11/SRR002/443/SRR2443157/SRR2443157.sralite.1"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443157/SRR2443157"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443227/SRR2443227"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443209/SRR2443209"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443148/SRR2443148"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443199/SRR2443199"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443242/SRR2443242"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443172/SRR2443172"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443147/SRR2443147"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443243/SRR2443243"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443193/SRR2443193"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443168/SRR2443168"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443221/SRR2443221"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443192/SRR2443192"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443189/SRR2443189"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443222/SRR2443222"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443226/SRR2443226"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443212/SRR2443212"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443171/SRR2443171"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443163/SRR2443163"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443169/SRR2443169"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443215/SRR2443215"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443158/SRR2443158"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443170/SRR2443170"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443184/SRR2443184"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443239/SRR2443239"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443159/SRR2443159"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443207/SRR2443207"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443186/SRR2443186"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443224/SRR2443224"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443181/SRR2443181"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443165/SRR2443165"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443152/SRR2443152"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443173/SRR2443173"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443150/SRR2443150"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443205/SRR2443205"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443232/SRR2443232"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443235/SRR2443235"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443156/SRR2443156"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443174/SRR2443174"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443230/SRR2443230"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443225/SRR2443225"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443155/SRR2443155"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443149/SRR2443149"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443177/SRR2443177"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443194/SRR2443194"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443180/SRR2443180"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443211/SRR2443211"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443183/SRR2443183"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443236/SRR2443236"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443231/SRR2443231"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443190/SRR2443190"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443166/SRR2443166"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443214/SRR2443214"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443204/SRR2443204"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443220/SRR2443220"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443245/SRR2443245"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443216/SRR2443216"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443185/SRR2443185"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443210/SRR2443210"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443201/SRR2443201"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443176/SRR2443176"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443213/SRR2443213"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443191/SRR2443191"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443241/SRR2443241"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443198/SRR2443198"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443162/SRR2443162"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443188/SRR2443188"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443240/SRR2443240"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443153/SRR2443153"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443197/SRR2443197"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443160/SRR2443160"
curl -L -O -C - "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos5/sra-pub-zq-11/SRR002/443/SRR2443160/SRR2443160.sralite.1"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443228/SRR2443228"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443206/SRR2443206"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443161/SRR2443161"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443178/SRR2443178"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443233/SRR2443233"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443196/SRR2443196"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443195/SRR2443195"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443234/SRR2443234"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443182/SRR2443182"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443219/SRR2443219"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443200/SRR2443200"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443223/SRR2443223"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443187/SRR2443187"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443208/SRR2443208"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443154/SRR2443154"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443229/SRR2443229"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443238/SRR2443238"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443203/SRR2443203"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443202/SRR2443202"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443244/SRR2443244"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443175/SRR2443175"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443217/SRR2443217"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443237/SRR2443237"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443258/SRR2443258"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443247/SRR2443247"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443263/SRR2443263"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443250/SRR2443250"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443252/SRR2443252"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443249/SRR2443249"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443261/SRR2443261"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443254/SRR2443254"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443256/SRR2443256"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443253/SRR2443253"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443260/SRR2443260"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443259/SRR2443259"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443251/SRR2443251"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443257/SRR2443257"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443262/SRR2443262"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443255/SRR2443255"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443248/SRR2443248"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443246/SRR2443246"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443179/SRR2443179"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443218/SRR2443218"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443164/SRR2443164"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443167/SRR2443167"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR2443151/SRR2443151"

echo "Download complete. Files saved to $OUTDIR"