GSE13483
GSE GEODivergent transcription from active promoters
Organism:
Homo sapiens
Platform:
GPL7564
Samples:
3
Experiment Types:
Non-coding RNA profiling by high throughput sequencing
Submitted:
Nov 05 2008
Last Updated:
Mar 20 2012
Status:
Public on Nov 06 2008
Contact:
Gene,,Yeo (UCSD)
Relations
BioProject: https://www.ncbi.nlm.nih.gov/bioproject/PRJNA110161
Summary
Here we describe a novel class of short RNAs that indicate widespread divergent transcription at mammalian promoters
Overall Design
Small RNA cloning and deep sequencing from human embryonic stem cells, derived neural progenitors and neurons
Analysis (1 step)
View Data Processing
Processing steps for GSE13483
- Image analysis and base calling was done using Gerald (Illumina pipeline), and reads aligned to human (hg17) using Megablast.
Dataset Citations (1)
Divergent transcription from active promoters.
PMID 19056940
· 2008
· Science (New York, N.Y.)
Amy C Seila, J Mauro Calabrese, Stuart S Levine, Gene W Yeo, Peter B Rahl, Ryan A Flynn, Richard A Young, Phillip A Sharp
Linked Publications (1)
Divergent transcription from active promoters.
Science (New York, N.Y.) · 2008