#!/usr/bin/env bash
# Bulk download script for GSE147021
# Generated from Yeo Lab Publications Database
# Total files: 55

OUTDIR="GSE147021"
mkdir -p "$OUTDIR"
cd "$OUTDIR"

# --- GEO supplementary files ---
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE147nnn/GSE147021/suppl/GSE147021_Procesed_D7_D35_LCMV_RNASeq.txt.gz" -O "GSE147021_Procesed_D7_D35_LCMV_RNASeq.txt.gz"

# --- SRA run files ---
# Tip: use 'fasterq-dump' from SRA Toolkit for FASTQ conversion
#      with optional renaming to original submitted FASTQ names.
# Set to 1 to rename SRR outputs (e.g. SRR_1.fastq.gz -> sample_R1.fastq.gz)
RENAME_SRA_TO_ORIGINAL=1

_compress_if_exists() {
  local stem="$1"
  if [ -f "${stem}.fastq" ]; then
    gzip -f "${stem}.fastq"
    echo "${stem}.fastq.gz"
    return 0
  fi
  if [ -f "${stem}.fq" ]; then
    gzip -f "${stem}.fq"
    echo "${stem}.fq.gz"
    return 0
  fi
  return 1
}

# Option A: Download via SRA Toolkit (recommended)
fasterq-dump --split-files "SRR11356436"
gz1="$(_compress_if_exists 'SRR11356436_1' || true)"
gz2="$(_compress_if_exists 'SRR11356436_2' || true)"
gzs="$(_compress_if_exists 'SRR11356436' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "000008565169_E11.R1.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "000008565169_E11.R2.fastq.gz"
fi

fasterq-dump --split-files "SRR11356437"
gz1="$(_compress_if_exists 'SRR11356437_1' || true)"
gz2="$(_compress_if_exists 'SRR11356437_2' || true)"
gzs="$(_compress_if_exists 'SRR11356437' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "000008565169_F11.R1.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "000008565169_F11.R2.fastq.gz"
fi

fasterq-dump --split-files "SRR11356438"
gz1="$(_compress_if_exists 'SRR11356438_1' || true)"
gz2="$(_compress_if_exists 'SRR11356438_2' || true)"
gzs="$(_compress_if_exists 'SRR11356438' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "000008565169_G11.R1.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "000008565169_G11.R2.fastq.gz"
fi

fasterq-dump --split-files "SRR11356439"
gz1="$(_compress_if_exists 'SRR11356439_1' || true)"
gz2="$(_compress_if_exists 'SRR11356439_2' || true)"
gzs="$(_compress_if_exists 'SRR11356439' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "000008565169_H11.R1.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "000008565169_H11.R2.fastq.gz"
fi

fasterq-dump --split-files "SRR11356440"
gz1="$(_compress_if_exists 'SRR11356440_1' || true)"
gz2="$(_compress_if_exists 'SRR11356440_2' || true)"
gzs="$(_compress_if_exists 'SRR11356440' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "000008570169_A01.R1.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "000008570169_A01.R2.fastq.gz"
fi

fasterq-dump --split-files "SRR11356441"
gz1="$(_compress_if_exists 'SRR11356441_1' || true)"
gz2="$(_compress_if_exists 'SRR11356441_2' || true)"
gzs="$(_compress_if_exists 'SRR11356441' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "000008570169_B01.R1.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "000008570169_B01.R2.fastq.gz"
fi

fasterq-dump --split-files "SRR11356442"
gz1="$(_compress_if_exists 'SRR11356442_1' || true)"
gz2="$(_compress_if_exists 'SRR11356442_2' || true)"
gzs="$(_compress_if_exists 'SRR11356442' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "000008570169_E01.R1.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "000008570169_E01.R2.fastq.gz"
fi

fasterq-dump --split-files "SRR11356443"
gz1="$(_compress_if_exists 'SRR11356443_1' || true)"
gz2="$(_compress_if_exists 'SRR11356443_2' || true)"
gzs="$(_compress_if_exists 'SRR11356443' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "000008570169_F01.R1.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "000008570169_F01.R2.fastq.gz"
fi

fasterq-dump --split-files "SRR11356444"
gz1="$(_compress_if_exists 'SRR11356444_1' || true)"
gz2="$(_compress_if_exists 'SRR11356444_2' || true)"
gzs="$(_compress_if_exists 'SRR11356444' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "000008570169_H01.R1.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "000008570169_H01.R2.fastq.gz"
fi

fasterq-dump --split-files "SRR11356445"
gz1="$(_compress_if_exists 'SRR11356445_1' || true)"
gz2="$(_compress_if_exists 'SRR11356445_2' || true)"
gzs="$(_compress_if_exists 'SRR11356445' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "000008570169_A02.R1.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "000008570169_A02.R2.fastq.gz"
fi

fasterq-dump --split-files "SRR11356446"
gz1="$(_compress_if_exists 'SRR11356446_1' || true)"
gz2="$(_compress_if_exists 'SRR11356446_2' || true)"
gzs="$(_compress_if_exists 'SRR11356446' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "000008570169_B02.R1.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "000008570169_B02.R2.fastq.gz"
fi

fasterq-dump --split-files "SRR11356447"
gz1="$(_compress_if_exists 'SRR11356447_1' || true)"
gz2="$(_compress_if_exists 'SRR11356447_2' || true)"
gzs="$(_compress_if_exists 'SRR11356447' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "000008570169_C02.R1.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "000008570169_C02.R2.fastq.gz"
fi

fasterq-dump --split-files "SRR11356448"
gz1="$(_compress_if_exists 'SRR11356448_1' || true)"
gz2="$(_compress_if_exists 'SRR11356448_2' || true)"
gzs="$(_compress_if_exists 'SRR11356448' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "000008570169_D02.R1.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "000008570169_D02.R2.fastq.gz"
fi

fasterq-dump --split-files "SRR11356449"
gz1="$(_compress_if_exists 'SRR11356449_1' || true)"
gz2="$(_compress_if_exists 'SRR11356449_2' || true)"
gzs="$(_compress_if_exists 'SRR11356449' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "000008570169_E02.R1.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "000008570169_E02.R2.fastq.gz"
fi

fasterq-dump --split-files "SRR11356450"
gz1="$(_compress_if_exists 'SRR11356450_1' || true)"
gz2="$(_compress_if_exists 'SRR11356450_2' || true)"
gzs="$(_compress_if_exists 'SRR11356450' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "000008570169_F02.R1.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "000008570169_F02.R2.fastq.gz"
fi

fasterq-dump --split-files "SRR11356451"
gz1="$(_compress_if_exists 'SRR11356451_1' || true)"
gz2="$(_compress_if_exists 'SRR11356451_2' || true)"
gzs="$(_compress_if_exists 'SRR11356451' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "000008570169_G02.R1.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "000008570169_G02.R2.fastq.gz"
fi

fasterq-dump --split-files "SRR11356452"
gz1="$(_compress_if_exists 'SRR11356452_1' || true)"
gz2="$(_compress_if_exists 'SRR11356452_2' || true)"
gzs="$(_compress_if_exists 'SRR11356452' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "000008570169_H02.R1.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "000008570169_H02.R2.fastq.gz"
fi

fasterq-dump --split-files "SRR11356453"
gz1="$(_compress_if_exists 'SRR11356453_1' || true)"
gz2="$(_compress_if_exists 'SRR11356453_2' || true)"
gzs="$(_compress_if_exists 'SRR11356453' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "000008570169_A03.R1.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "000008570169_A03.R2.fastq.gz"
fi

fasterq-dump --split-files "SRR11356454"
gz1="$(_compress_if_exists 'SRR11356454_1' || true)"
gz2="$(_compress_if_exists 'SRR11356454_2' || true)"
gzs="$(_compress_if_exists 'SRR11356454' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "000008570169_B03.R1.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "000008570169_B03.R2.fastq.gz"
fi

fasterq-dump --split-files "SRR11356455"
gz1="$(_compress_if_exists 'SRR11356455_1' || true)"
gz2="$(_compress_if_exists 'SRR11356455_2' || true)"
gzs="$(_compress_if_exists 'SRR11356455' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "000008570169_E03.R1.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "000008570169_E03.R2.fastq.gz"
fi

fasterq-dump --split-files "SRR11356456"
gz1="$(_compress_if_exists 'SRR11356456_1' || true)"
gz2="$(_compress_if_exists 'SRR11356456_2' || true)"
gzs="$(_compress_if_exists 'SRR11356456' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "000008570169_F03.R1.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "000008570169_F03.R2.fastq.gz"
fi

fasterq-dump --split-files "SRR11356457"
gz1="$(_compress_if_exists 'SRR11356457_1' || true)"
gz2="$(_compress_if_exists 'SRR11356457_2' || true)"
gzs="$(_compress_if_exists 'SRR11356457' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "000008570169_G03.R1.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "000008570169_G03.R2.fastq.gz"
fi

fasterq-dump --split-files "SRR11356458"
gz1="$(_compress_if_exists 'SRR11356458_1' || true)"
gz2="$(_compress_if_exists 'SRR11356458_2' || true)"
gzs="$(_compress_if_exists 'SRR11356458' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "000008570169_H03.R1.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "000008570169_H03.R2.fastq.gz"
fi

fasterq-dump --split-files "SRR11356459"
gz1="$(_compress_if_exists 'SRR11356459_1' || true)"
gz2="$(_compress_if_exists 'SRR11356459_2' || true)"
gzs="$(_compress_if_exists 'SRR11356459' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "000008570169_A04.R1.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "000008570169_A04.R2.fastq.gz"
fi

fasterq-dump --split-files "SRR11356460"
gz1="$(_compress_if_exists 'SRR11356460_1' || true)"
gz2="$(_compress_if_exists 'SRR11356460_2' || true)"
gzs="$(_compress_if_exists 'SRR11356460' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "000008570169_B04.R1.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "000008570169_B04.R2.fastq.gz"
fi

fasterq-dump --split-files "SRR11356461"
gz1="$(_compress_if_exists 'SRR11356461_1' || true)"
gz2="$(_compress_if_exists 'SRR11356461_2' || true)"
gzs="$(_compress_if_exists 'SRR11356461' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "000008570169_C04.R1.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "000008570169_C04.R2.fastq.gz"
fi

fasterq-dump --split-files "SRR11356462"
gz1="$(_compress_if_exists 'SRR11356462_1' || true)"
gz2="$(_compress_if_exists 'SRR11356462_2' || true)"
gzs="$(_compress_if_exists 'SRR11356462' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "000008570169_D04.R1.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "000008570169_D04.R2.fastq.gz"
fi


# Option B: Direct download (larger .sra files)
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356436/SRR11356436"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356437/SRR11356437"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356438/SRR11356438"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356439/SRR11356439"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356440/SRR11356440"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356441/SRR11356441"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356442/SRR11356442"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356443/SRR11356443"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356444/SRR11356444"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356445/SRR11356445"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356446/SRR11356446"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356447/SRR11356447"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356448/SRR11356448"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356449/SRR11356449"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356450/SRR11356450"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356451/SRR11356451"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356452/SRR11356452"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356453/SRR11356453"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356454/SRR11356454"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356455/SRR11356455"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356456/SRR11356456"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356457/SRR11356457"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356458/SRR11356458"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356459/SRR11356459"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356460/SRR11356460"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356461/SRR11356461"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356462/SRR11356462"

# --- Additional data files ---
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356436/SRR11356436"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356437/SRR11356437"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356438/SRR11356438"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356439/SRR11356439"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356440/SRR11356440"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356445/SRR11356445"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356453/SRR11356453"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356459/SRR11356459"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356441/SRR11356441"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356446/SRR11356446"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356454/SRR11356454"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356460/SRR11356460"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356447/SRR11356447"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356461/SRR11356461"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356448/SRR11356448"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356462/SRR11356462"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356442/SRR11356442"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356449/SRR11356449"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356455/SRR11356455"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356443/SRR11356443"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356450/SRR11356450"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356456/SRR11356456"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356451/SRR11356451"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356457/SRR11356457"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356444/SRR11356444"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356452/SRR11356452"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR11356458/SRR11356458"

echo "Download complete. Files saved to $OUTDIR"