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GSE131847

GSE GEO
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Molecular determinants and heterogeneity of circulating and tissue-resident memory CD8+ T lymphocytes revealed by single-cell RNA sequencing

Organism: Mus musculus
Platform: GPL21103
Samples: 25
Experiment Types:
Expression profiling by high throughput sequencing
Submitted: May 28 2019
Last Updated: Feb 14 2022
Status: Public on May 15 2020
Contact: John,,Chang (UCSD)

Relations

BioProject: https://www.ncbi.nlm.nih.gov/bioproject/PRJNA545114 SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRP199655

Summary

We generated a single-cell transcriptomic resource dataset encompassing the gene-expression patterns of circulating and small intestine intraepithelial CD8+ T cells in response to viral infection. Our analyses revealed a core transcriptional program shared between circulating memory and tissue-resident memory (TRM) cells, along with key differences in the kinetics and magnitude of gene expression between these two memory CD8+ T lymphocyte subtypes. Moreover, we elucidated previously unappreciated heterogeneity within the small intestine intraepithelial CD8+ T cell pool at multiple time points following infection.

Overall Design

Single cell RNA sequencing was performed on CD8 T cells isolated from the spleen or small intestinal intraepithelial compartment at 11 timepoints following infection with lymphocytic choriomeningitis virus

Analysis (5 steps)

View Data Processing
Processing steps for GSE131847
  1. data were processed by cellranger 2.1.0 with default parameter, using mm10 as reference.
  2. Raw cell-reads were then loaded to R using the cellrangerRkit package.
  3. The scRNA-seq dataset was then further filtered based on gene numbers and mitochondria gene counts total counts ratio.
  4. Only cells with > 400 genes,UMI > 0,and 0.5% ~ 20% of their UMIs mappingto mitochondria genes were kept for downstream analysis.
  5. For the scRNA-seq, the first 16 bp of R1 is the cell barcode and the next 10bp (17-26bp) is the UMI.

Supplementary Files (1)

GSE131847_RAW.tar Download
GEO Samples (25)
GSM3822179 GSM3822180 GSM3822181 GSM3822182 GSM3822183 GSM3822184 GSM3822185 GSM3822186 GSM3822187 GSM3822188 GSM3822189 GSM3822190 GSM3822191 GSM3822192 GSM3822193 GSM3822194 GSM3822195 GSM3822196 GSM3822197 GSM3822198 GSM3822199 GSM3822200 GSM3822201 GSM3822202 GSM3822203

Dataset Citations (1)

Early precursors and molecular determinants of tissue-resident memory CD8<sup>+</sup> T lymphocytes revealed by single-cell RNA sequencing.
PMID 32414833 · 2020 · Science immunology
Nadia S Kurd, Zhaoren He, Tiani L Louis, J Justin Milner, Kyla D Omilusik, Wenhao Jin, Matthew S Tsai, Christella E Widjaja, Jad N Kanbar, Jocelyn G Olvera, Tiffani Tysl, Lauren K Quezada, Brigid S Boland, Wendy J Huang, Cornelis Murre, Ananda W Goldrath, Gene W Yeo, John T Chang

SRA Experiments (25) and Runs (472)

Total: 187260 MB
SRX5910204 SRP199655 RNA-Seq PAIRED
GSM3822179: Naïve_Spleen_scRNA; Mus musculus; RNA-Seq
Sample: SRS4829095
BioProject: PRJNA545114
BioSample: SAMN11874384
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Mus musculus
Sample attributes
source_name: Spleen CD8+ T cell
time point: Naïve
tissue: spleen
cell type surface markers: CD45+ CD3+ CD8+
cell type: CD8 T cells
Original files (1)
Spleen CD8+ T cell
Runs (36)
Run Spots Bases Size (MB) Files Link
SRR9136455 2719282 337190968 152.22 naive_S4_L001_R1_001.fastq.gz, naive_S4_L001_R2_001.fastq.gz, SRR9136… SRA
SRR9136456 2274444 282031056 132.41 naive_S1_L003_R1_001.fastq.gz, naive_S1_L003_R2_001.fastq.gz, SRR9136… SRA
SRR9136457 1619240 200785760 94.92 naive_S2_L004_R1_001.fastq.gz, naive_S2_L004_R2_001.fastq.gz, SRR9136… SRA
SRR9136458 1936534 240130216 112.33 naive_S3_L005_R1_001.fastq.gz, naive_S3_L005_R2_001.fastq.gz, SRR9136… SRA
SRR9136459 2318712 287520288 130.96 naive_S1_L001_R1_001.fastq.gz, naive_S1_L001_R2_001.fastq.gz, SRR9136… SRA
SRR9136460 2669633 331034492 155.44 naive_S4_L006_R1_001.fastq.gz, naive_S4_L006_R2_001.fastq.gz, SRR9136… SRA
SRR9136461 8946858 1109410392 556.99 10X_naive_S23_L004_R1_001.fastq.gz, 10X_naive_S23_L004_R2_001.fastq.g… SRA
SRR9136462 2178707 270159668 127.74 naive_S1_L008_R1_001.fastq.gz, naive_S1_L008_R2_001.fastq.gz, SRR9136… SRA
SRR9136463 1966948 243901552 109.87 naive_S3_L001_R1_001.fastq.gz, naive_S3_L001_R2_001.fastq.gz, SRR9136… SRA
SRR9136464 2721722 337493528 155.24 naive_S4_L002_R1_001.fastq.gz, naive_S4_L002_R2_001.fastq.gz, SRR9136… SRA
SRR9136465 2303682 285656568 134.11 naive_S1_L004_R1_001.fastq.gz, naive_S1_L004_R2_001.fastq.gz, SRR9136… SRA
SRR9136466 1610158 199659592 95.22 naive_S2_L005_R1_001.fastq.gz, naive_S2_L005_R2_001.fastq.gz, SRR9136… SRA
SRR9136467 1936975 240184900 112.14 naive_S3_L006_R1_001.fastq.gz, naive_S3_L006_R2_001.fastq.gz, SRR9136… SRA
SRR9136468 2640105 327373020 153.47 naive_S4_L007_R1_001.fastq.gz, naive_S4_L007_R2_001.fastq.gz, SRR9136… SRA
SRR9136469 12872504 1596190496 806.51 10X_naive_S24_L004_R1_001.fastq.gz, 10X_naive_S24_L004_R2_001.fastq.g… SRA
SRR9136470 2278597 282546028 133.64 naive_S1_L006_R1_001.fastq.gz, naive_S1_L006_R2_001.fastq.gz, SRR9136… SRA
SRR9136471 1642068 203616432 93.56 naive_S2_L001_R1_001.fastq.gz, naive_S2_L001_R2_001.fastq.gz, SRR9136… SRA
SRR9136472 1977359 245192516 112.34 naive_S3_L002_R1_001.fastq.gz, naive_S3_L002_R2_001.fastq.gz, SRR9136… SRA
SRR9136473 2674314 331614936 154.6 naive_S4_L003_R1_001.fastq.gz, naive_S4_L003_R2_001.fastq.gz, SRR9136… SRA
SRR9136474 2276943 282340932 133.7 naive_S1_L005_R1_001.fastq.gz, naive_S1_L005_R2_001.fastq.gz, SRR9136… SRA
SRR9136475 1604948 199013552 94.86 naive_S2_L006_R1_001.fastq.gz, naive_S2_L006_R2_001.fastq.gz, SRR9136… SRA
SRR9136476 1916195 237608180 110.75 naive_S3_L007_R1_001.fastq.gz, naive_S3_L007_R2_001.fastq.gz, SRR9136… SRA
SRR9136477 2570999 318803876 149.47 naive_S4_L008_R1_001.fastq.gz, naive_S4_L008_R2_001.fastq.gz, SRR9136… SRA
SRR9136478 1641254 203515496 95.11 naive_S2_L002_R1_001.fastq.gz, naive_S2_L002_R2_001.fastq.gz, SRR9136… SRA
SRR9136479 1585541 196607084 93.69 naive_S2_L007_R1_001.fastq.gz, naive_S2_L007_R2_001.fastq.gz, SRR9136… SRA
SRR9136480 1932619 239644756 111.17 naive_S3_L003_R1_001.fastq.gz, naive_S3_L003_R2_001.fastq.gz, SRR9136… SRA
SRR9136481 1859833 230619292 107.52 naive_S3_L008_R1_001.fastq.gz, naive_S3_L008_R2_001.fastq.gz, SRR9136… SRA
SRR9136482 2692474 333866776 155.64 naive_S4_L004_R1_001.fastq.gz, naive_S4_L004_R2_001.fastq.gz, SRR9136… SRA
SRR9136483 2328150 288690600 133.86 naive_S1_L002_R1_001.fastq.gz, naive_S1_L002_R2_001.fastq.gz, SRR9136… SRA
SRR9136567 10347969 1283148156 651.65 10X_naive_S21_L004_R1_001.fastq.gz, 10X_naive_S21_L004_R2_001.fastq.g… SRA
SRR9136568 1611560 199833440 94.52 naive_S2_L003_R1_001.fastq.gz, naive_S2_L003_R2_001.fastq.gz, SRR9136… SRA
SRR9136569 1953943 242288932 112.4 naive_S3_L004_R1_001.fastq.gz, naive_S3_L004_R2_001.fastq.gz, SRR9136… SRA
SRR9136570 2669760 331050240 155.7 naive_S4_L005_R1_001.fastq.gz, naive_S4_L005_R2_001.fastq.gz, SRR9136… SRA
SRR9136571 7895724 979069776 500.3 10X_naive_S22_L004_R1_001.fastq.gz, 10X_naive_S22_L004_R2_001.fastq.g… SRA
SRR9136572 2246321 278543804 131.59 naive_S1_L007_R1_001.fastq.gz, naive_S1_L007_R2_001.fastq.gz, SRR9136… SRA
SRR9136573 1550533 192266092 91.81 naive_S2_L008_R1_001.fastq.gz, naive_S2_L008_R2_001.fastq.gz, SRR9136… SRA
SRX5910205 SRP199655 RNA-Seq PAIRED
GSM3822180: D3_Spleen_scRNA; Mus musculus; RNA-Seq
Sample: SRS4829096
BioProject: PRJNA545114
BioSample: SAMN11874408
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Mus musculus
Sample attributes
source_name: Spleen CD8+ T cell
time point: D3
tissue: spleen
cell type surface markers: CD45+ CD3+ CD8+
cell type: CD8 T cells
Original files (1)
Spleen CD8+ T cell
Runs (28)
Run Spots Bases Size (MB) Files Link
SRR9136484 3028 375472 0.28 10X_d3_S25_L001_R1_001.fastq.gz, 10X_d3_S25_L001_R2_001.fastq.gz, SRR… SRA
SRR9136485 7507784 930965216 490.24 10X_d3_S27_L004_R1_001.fastq.gz, 10X_d3_S27_L004_R2_001.fastq.gz, SRR… SRA
SRR9136486 7190590 891633160 421.34 10X_d3_S35_L008_R1_001.fastq.gz, 10X_d3_S35_L008_R2_001.fastq.gz, SRR… SRA
SRR9136487 16187207 2007213668 943.02 d3_S27_L002_R1_001.fastq.gz, d3_S27_L002_R2_001.fastq.gz, SRR9136487,… SRA
SRR9136488 9565261 1186092364 611.78 10X_d3_S25_L002_R1_001.fastq.gz, 10X_d3_S25_L002_R2_001.fastq.gz, SRR… SRA
SRR9136489 6266 776984 0.49 10X_d3_S27_L001_R1_001.fastq.gz, 10X_d3_S27_L001_R2_001.fastq.gz, SRR… SRA
SRR9136490 8181431 1014497444 534.56 10X_d3_S28_L004_R1_001.fastq.gz, 10X_d3_S28_L004_R2_001.fastq.gz, SRR… SRA
SRR9136491 22334199 2769440676 1305.85 d3_S26_L001_R1_001.fastq.gz, d3_S26_L001_R2_001.fastq.gz, SRR9136491,… SRA
SRR9136492 12180082 1510330168 778.92 10X_d3_S26_L002_R1_001.fastq.gz, 10X_d3_S26_L002_R2_001.fastq.gz, SRR… SRA
SRR9136493 2771 343604 0.26 10X_d3_S28_L001_R1_001.fastq.gz, 10X_d3_S28_L001_R2_001.fastq.gz, SRR… SRA
SRR9136494 8222972 1019648528 497.58 10X_d3_S36_L008_R1_001.fastq.gz, 10X_d3_S36_L008_R2_001.fastq.gz, SRR… SRA
SRR9136495 7863280 975046720 513.42 10X_d3_S25_L004_R1_001.fastq.gz, 10X_d3_S25_L004_R2_001.fastq.gz, SRR… SRA
SRR9136496 18608487 2307452388 1132.93 d3_S28_L001_R1_001.fastq.gz, d3_S28_L001_R2_001.fastq.gz, SRR9136496,… SRA
SRR9136497 7462173 925309452 490.73 10X_d3_S25_L003_R1_001.fastq.gz, 10X_d3_S25_L003_R2_001.fastq.gz, SRR… SRA
SRR9136498 9033331 1120133044 577.62 10X_d3_S27_L002_R1_001.fastq.gz, 10X_d3_S27_L002_R2_001.fastq.gz, SRR… SRA
SRR9136499 7576440 939478560 448.63 10X_d3_S33_L008_R1_001.fastq.gz, 10X_d3_S33_L008_R2_001.fastq.gz, SRR… SRA
SRR9136500 22193331 2751973044 1296.74 d3_S26_L002_R1_001.fastq.gz, d3_S26_L002_R2_001.fastq.gz, SRR9136500,… SRA
SRR9136501 9512675 1179571700 625.69 10X_d3_S26_L003_R1_001.fastq.gz, 10X_d3_S26_L003_R2_001.fastq.gz, SRR… SRA
SRR9136502 9944202 1233081048 636.22 10X_d3_S28_L002_R1_001.fastq.gz, 10X_d3_S28_L002_R2_001.fastq.gz, SRR… SRA
SRR9136503 17417943 2159824932 1022.49 d3_S25_L001_R1_001.fastq.gz, d3_S25_L001_R2_001.fastq.gz, SRR9136503,… SRA
SRR9136504 18511637 2295442988 1129.35 d3_S28_L002_R1_001.fastq.gz, d3_S28_L002_R2_001.fastq.gz, SRR9136504,… SRA
SRR9136505 10025530 1243165720 654.67 10X_d3_S26_L004_R1_001.fastq.gz, 10X_d3_S26_L004_R2_001.fastq.gz, SRR… SRA
SRR9136506 7157270 887501480 470.75 10X_d3_S27_L003_R1_001.fastq.gz, 10X_d3_S27_L003_R2_001.fastq.gz, SRR… SRA
SRR9136507 7746334 960545416 509.82 10X_d3_S28_L003_R1_001.fastq.gz, 10X_d3_S28_L003_R2_001.fastq.gz, SRR… SRA
SRR9136508 9740240 1207789760 574.15 10X_d3_S34_L008_R1_001.fastq.gz, 10X_d3_S34_L008_R2_001.fastq.gz, SRR… SRA
SRR9136509 17302266 2145480984 1015.27 d3_S25_L002_R1_001.fastq.gz, d3_S25_L002_R2_001.fastq.gz, SRR9136509,… SRA
SRR9136510 16253911 2015484964 947.44 d3_S27_L001_R1_001.fastq.gz, d3_S27_L001_R2_001.fastq.gz, SRR9136510,… SRA
SRR9136511 3566 442184 0.31 10X_d3_S26_L001_R1_001.fastq.gz, 10X_d3_S26_L001_R2_001.fastq.gz, SRR… SRA
SRX5910206 SRP199655 RNA-Seq PAIRED
GSM3822181: D4_Spleen_scRNA; Mus musculus; RNA-Seq
Sample: SRS4829097
BioProject: PRJNA545114
BioSample: SAMN11874407
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Mus musculus
Sample attributes
source_name: Spleen CD8+ T cell
time point: D4
tissue: spleen
cell type surface markers: CD45+ CD3+ CD8+
cell type: CD8 T cells
Original files (1)
Spleen CD8+ T cell
Runs (28)
Run Spots Bases Size (MB) Files Link
SRR9136512 6920 858080 0.54 10X_d4_S29_L001_R1_001.fastq.gz, 10X_d4_S29_L001_R2_001.fastq.gz, SRR… SRA
SRR9136513 7321251 907835124 479.17 10X_d4_S30_L004_R1_001.fastq.gz, 10X_d4_S30_L004_R2_001.fastq.gz, SRR… SRA
SRR9136514 7352239 911677636 482.74 10X_d4_S31_L003_R1_001.fastq.gz, 10X_d4_S31_L003_R2_001.fastq.gz, SRR… SRA
SRR9136515 11899614 1475552136 759.23 10X_d4_S32_L002_R1_001.fastq.gz, 10X_d4_S32_L002_R2_001.fastq.gz, SRR… SRA
SRR9136516 8591622 1065361128 501.03 10X_d4_S37_L008_R1_001.fastq.gz, 10X_d4_S37_L008_R2_001.fastq.gz, SRR… SRA
SRR9136517 10626763 1317718612 626.14 10X_d4_S40_L008_R1_001.fastq.gz, 10X_d4_S40_L008_R2_001.fastq.gz, SRR… SRA
SRR9136518 7548508 936014992 494.09 10X_d4_S29_L003_R1_001.fastq.gz, 10X_d4_S29_L003_R2_001.fastq.gz, SRR… SRA
SRR9136519 8790521 1090024604 565.57 10X_d4_S30_L002_R1_001.fastq.gz, 10X_d4_S30_L002_R2_001.fastq.gz, SRR… SRA
SRR9136520 2677 331948 0.25 10X_d4_S31_L001_R1_001.fastq.gz, 10X_d4_S31_L001_R2_001.fastq.gz, SRR… SRA
SRR9136521 7768771 963327604 506.21 10X_d4_S31_L004_R1_001.fastq.gz, 10X_d4_S31_L004_R2_001.fastq.gz, SRR… SRA
SRR9136522 9313919 1154925956 611.37 10X_d4_S32_L003_R1_001.fastq.gz, 10X_d4_S32_L003_R2_001.fastq.gz, SRR… SRA
SRR9136523 7908911 980704964 513.49 10X_d4_S29_L004_R1_001.fastq.gz, 10X_d4_S29_L004_R2_001.fastq.gz, SRR… SRA
SRR9136524 8005411 992670964 481.37 10X_d4_S38_L008_R1_001.fastq.gz, 10X_d4_S38_L008_R2_001.fastq.gz, SRR… SRA
SRR9136525 13648459 1692408916 785.7 d4_S29_L001_R1_001.fastq.gz, d4_S29_L001_R2_001.fastq.gz, SRR9136525,… SRA
SRR9136526 13573722 1683141528 780.94 d4_S29_L002_R1_001.fastq.gz, d4_S29_L002_R2_001.fastq.gz, SRR9136526,… SRA
SRR9136527 12666209 1570609916 749.46 d4_S30_L001_R1_001.fastq.gz, d4_S30_L001_R2_001.fastq.gz, SRR9136527,… SRA
SRR9136528 12555443 1556874932 742.02 d4_S30_L002_R1_001.fastq.gz, d4_S30_L002_R2_001.fastq.gz, SRR9136528,… SRA
SRR9136529 14242976 1766129024 825.17 d4_S31_L001_R1_001.fastq.gz, d4_S31_L001_R2_001.fastq.gz, SRR9136529,… SRA
SRR9136530 14102231 1748676644 816.37 d4_S31_L002_R1_001.fastq.gz, d4_S31_L002_R2_001.fastq.gz, SRR9136530,… SRA
SRR9136531 17862405 2214938220 1038.02 d4_S32_L001_R1_001.fastq.gz, d4_S32_L001_R2_001.fastq.gz, SRR9136531,… SRA
SRR9136532 17686247 2193094628 1026.98 d4_S32_L002_R1_001.fastq.gz, d4_S32_L002_R2_001.fastq.gz, SRR9136532,… SRA
SRR9136533 6993015 867133860 460.45 10X_d4_S30_L003_R1_001.fastq.gz, 10X_d4_S30_L003_R2_001.fastq.gz, SRR… SRA
SRR9136534 9423413 1168503212 600.81 10X_d4_S31_L002_R1_001.fastq.gz, 10X_d4_S31_L002_R2_001.fastq.gz, SRR… SRA
SRR9136535 3605 447020 0.31 10X_d4_S32_L001_R1_001.fastq.gz, 10X_d4_S32_L001_R2_001.fastq.gz, SRR… SRA
SRR9136536 9824927 1218290948 640.02 10X_d4_S32_L004_R1_001.fastq.gz, 10X_d4_S32_L004_R2_001.fastq.gz, SRR… SRA
SRR9136537 8922207 1106353668 524.68 10X_d4_S39_L008_R1_001.fastq.gz, 10X_d4_S39_L008_R2_001.fastq.gz, SRR… SRA
SRR9136538 9479144 1175413856 601.65 10X_d4_S29_L002_R1_001.fastq.gz, 10X_d4_S29_L002_R2_001.fastq.gz, SRR… SRA
SRR9136539 8877 1100748 0.66 10X_d4_S30_L001_R1_001.fastq.gz, 10X_d4_S30_L001_R2_001.fastq.gz, SRR… SRA
SRX5910207 SRP199655 RNA-Seq PAIRED
GSM3822182: D4_Gut_scRNA; Mus musculus; RNA-Seq
Sample: SRS4829098
BioProject: PRJNA545114
BioSample: SAMN11874406
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Mus musculus
Sample attributes
source_name: Gut CD8+ T cell
time point: D4
tissue: gut
cell type surface markers: CD45+ CD3+ CD8+
cell type: CD8 T cells
Original files (1)
Gut CD8+ T cell
Runs (48)
Run Spots Bases Size (MB) Files Link
SRR9136540 529754 65689496 29.66 d4_TRM_S25_L001_R1_001.fastq.gz, d4_TRM_S25_L001_R2_001.fastq.gz, SRR… SRA
SRR9136541 1121892 139114608 65.15 d4_TRM_S26_L004_R1_001.fastq.gz, d4_TRM_S26_L004_R2_001.fastq.gz, SRR… SRA
SRR9136542 1107101 137280524 61.83 d4_TRM_S27_L001_R1_001.fastq.gz, d4_TRM_S27_L001_R2_001.fastq.gz, SRR… SRA
SRR9136543 1084085 134426540 63.14 d4_TRM_S27_L006_R1_001.fastq.gz, d4_TRM_S27_L006_R2_001.fastq.gz, SRR… SRA
SRR9136544 593317 73571308 34.31 d4_TRM_S28_L003_R1_001.fastq.gz, d4_TRM_S28_L003_R2_001.fastq.gz, SRR… SRA
SRR9136545 566074 70193176 32.96 d4_TRM_S28_L008_R1_001.fastq.gz, d4_TRM_S28_L008_R2_001.fastq.gz, SRR… SRA
SRR9136546 514394 63784856 29.73 d4_TRM_S25_L003_R1_001.fastq.gz, d4_TRM_S25_L003_R2_001.fastq.gz, SRR… SRA
SRR9136547 494723 61345652 28.77 d4_TRM_S25_L008_R1_001.fastq.gz, d4_TRM_S25_L008_R2_001.fastq.gz, SRR… SRA
SRR9136548 1111460 137821040 65.08 d4_TRM_S26_L005_R1_001.fastq.gz, d4_TRM_S26_L005_R2_001.fastq.gz, SRR… SRA
SRR9136549 1106790 137241960 63.01 d4_TRM_S27_L002_R1_001.fastq.gz, d4_TRM_S27_L002_R2_001.fastq.gz, SRR… SRA
SRR9136550 1075486 133360264 62.55 d4_TRM_S27_L007_R1_001.fastq.gz, d4_TRM_S27_L007_R2_001.fastq.gz, SRR… SRA
SRR9136551 514352 63779648 29.95 d4_TRM_S25_L006_R1_001.fastq.gz, d4_TRM_S25_L006_R2_001.fastq.gz, SRR… SRA
SRR9136552 598444 74207056 34.63 d4_TRM_S28_L004_R1_001.fastq.gz, d4_TRM_S28_L004_R2_001.fastq.gz, SRR… SRA
SRR9136553 518966 64351784 29.99 d4_TRM_S25_L004_R1_001.fastq.gz, d4_TRM_S25_L004_R2_001.fastq.gz, SRR… SRA
SRR9136554 1131546 140311704 63.84 d4_TRM_S26_L001_R1_001.fastq.gz, d4_TRM_S26_L001_R2_001.fastq.gz, SRR… SRA
SRR9136555 1112767 137983108 65.1 d4_TRM_S26_L006_R1_001.fastq.gz, d4_TRM_S26_L006_R2_001.fastq.gz, SRR… SRA
SRR9136556 1086157 134683468 62.75 d4_TRM_S27_L003_R1_001.fastq.gz, d4_TRM_S27_L003_R2_001.fastq.gz, SRR… SRA
SRR9136557 1045791 129678084 60.79 d4_TRM_S27_L008_R1_001.fastq.gz, d4_TRM_S27_L008_R2_001.fastq.gz, SRR… SRA
SRR9136558 591477 73343148 34.51 d4_TRM_S28_L005_R1_001.fastq.gz, d4_TRM_S28_L005_R2_001.fastq.gz, SRR… SRA
SRR9136559 514241 63765884 29.98 d4_TRM_S25_L005_R1_001.fastq.gz, d4_TRM_S25_L005_R2_001.fastq.gz, SRR… SRA
SRR9136560 1136177 140885948 65.17 d4_TRM_S26_L002_R1_001.fastq.gz, d4_TRM_S26_L002_R2_001.fastq.gz, SRR… SRA
SRR9136561 1099146 136294104 64.25 d4_TRM_S26_L007_R1_001.fastq.gz, d4_TRM_S26_L007_R2_001.fastq.gz, SRR… SRA
SRR9136562 1110367 137685508 64.44 d4_TRM_S26_L003_R1_001.fastq.gz, d4_TRM_S26_L003_R2_001.fastq.gz, SRR… SRA
SRR9136563 1094227 135684148 63.25 d4_TRM_S27_L004_R1_001.fastq.gz, d4_TRM_S27_L004_R2_001.fastq.gz, SRR… SRA
SRR9136564 609355 75560020 34.16 d4_TRM_S28_L001_R1_001.fastq.gz, d4_TRM_S28_L001_R2_001.fastq.gz, SRR… SRA
SRR9136565 591844 73388656 34.48 d4_TRM_S28_L006_R1_001.fastq.gz, d4_TRM_S28_L006_R2_001.fastq.gz, SRR… SRA
SRR9136566 17064016 2115937984 1077.79 10X_2m_TRM_d4_S13_L001_R1_001.fastq.gz, 10X_2m_TRM_d4_S13_L001_R2_001… SRA
SRR9136574 35238682 4369596568 2238.19 10X_2m_TRM_d4_S14_L001_R1_001.fastq.gz, 10X_2m_TRM_d4_S14_L001_R2_001… SRA
SRR9136575 35999146 4463894104 2272.3 10X_2m_TRM_d4_S15_L001_R1_001.fastq.gz, 10X_2m_TRM_d4_S15_L001_R2_001… SRA
SRR9136576 17190213 2131586412 1081.17 10X_2m_TRM_d4_S16_L001_R1_001.fastq.gz, 10X_2m_TRM_d4_S16_L001_R2_001… SRA
SRR9136577 527598 65422152 31.1 10X_2m_TRM_d4_S21_L008_R1_001.fastq.gz, 10X_2m_TRM_d4_S21_L008_R2_001… SRA
SRR9136578 541880 67193120 31.87 10X_2m_TRM_d4_S24_L008_R1_001.fastq.gz, 10X_2m_TRM_d4_S24_L008_R2_001… SRA
SRR9136579 17137675 2125071700 1078.07 10X_2m_TRM_d4_S13_L002_R1_001.fastq.gz, 10X_2m_TRM_d4_S13_L002_R2_001… SRA
SRR9136580 1062455 131744420 62.11 d4_TRM_S26_L008_R1_001.fastq.gz, d4_TRM_S26_L008_R2_001.fastq.gz, SRR… SRA
SRR9136581 35887281 4450022844 2270.55 10X_2m_TRM_d4_S14_L002_R1_001.fastq.gz, 10X_2m_TRM_d4_S14_L002_R2_001… SRA
SRR9136582 36592112 4537421888 2301.09 10X_2m_TRM_d4_S15_L002_R1_001.fastq.gz, 10X_2m_TRM_d4_S15_L002_R2_001… SRA
SRR9136583 17517916 2172221584 1097.53 10X_2m_TRM_d4_S16_L002_R1_001.fastq.gz, 10X_2m_TRM_d4_S16_L002_R2_001… SRA
SRR9136584 1114636 138214864 66.08 10X_2m_TRM_d4_S22_L008_R1_001.fastq.gz, 10X_2m_TRM_d4_S22_L008_R2_001… SRA
SRR9136585 16734033 2075020092 1053.12 10X_2m_TRM_d4_S13_L003_R1_001.fastq.gz, 10X_2m_TRM_d4_S13_L003_R2_001… SRA
SRR9136586 34773328 4311892672 2200.06 10X_2m_TRM_d4_S14_L003_R1_001.fastq.gz, 10X_2m_TRM_d4_S14_L003_R2_001… SRA
SRR9136587 35526016 4405225984 2234.74 10X_2m_TRM_d4_S15_L003_R1_001.fastq.gz, 10X_2m_TRM_d4_S15_L003_R2_001… SRA
SRR9136588 16970395 2104328980 1064.04 10X_2m_TRM_d4_S16_L003_R1_001.fastq.gz, 10X_2m_TRM_d4_S16_L003_R2_001… SRA
SRR9136589 1121827 139106548 65.95 10X_2m_TRM_d4_S23_L008_R1_001.fastq.gz, 10X_2m_TRM_d4_S23_L008_R2_001… SRA
SRR9136590 1087244 134818256 63.42 d4_TRM_S27_L005_R1_001.fastq.gz, d4_TRM_S27_L005_R2_001.fastq.gz, SRR… SRA
SRR9136591 606095 75155780 34.56 d4_TRM_S28_L002_R1_001.fastq.gz, d4_TRM_S28_L002_R2_001.fastq.gz, SRR… SRA
SRR9136592 583743 72384132 33.95 d4_TRM_S28_L007_R1_001.fastq.gz, d4_TRM_S28_L007_R2_001.fastq.gz, SRR… SRA
SRR9136593 526418 65275832 29.98 d4_TRM_S25_L002_R1_001.fastq.gz, d4_TRM_S25_L002_R2_001.fastq.gz, SRR… SRA
SRR9136594 506157 62763468 29.44 d4_TRM_S25_L007_R1_001.fastq.gz, d4_TRM_S25_L007_R2_001.fastq.gz, SRR… SRA
SRX5910208 SRP199655 RNA-Seq PAIRED
GSM3822183: D5_Spleen_scRNA; Mus musculus; RNA-Seq
Sample: SRS4829099
BioProject: PRJNA545114
BioSample: SAMN11874405
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Mus musculus
Sample attributes
source_name: Spleen CD8+ T cell
time point: D5
tissue: spleen
cell type surface markers: CD45+ CD3+ CD8+
cell type: CD8 T cells
Original files (1)
Spleen CD8+ T cell
Runs (48)
Run Spots Bases Size (MB) Files Link
SRR9136595 3024055 374982820 177.11 10X_100k_d5_S10_L008_R1_001.fastq.gz, 10X_100k_d5_S10_L008_R2_001.fas… SRA
SRR9136596 10086689 1250749436 632.68 10X_100k_d5_S2_L002_R1_001.fastq.gz, 10X_100k_d5_S2_L002_R2_001.fastq… SRA
SRR9136597 5102916 632761584 321.62 10X_100k_d5_S4_L002_R1_001.fastq.gz, 10X_100k_d5_S4_L002_R2_001.fastq… SRA
SRR9136598 7134243 884646132 408.37 d5_S29_L004_R1_001.fastq.gz, d5_S29_L004_R2_001.fastq.gz, SRR9136598,… SRA
SRR9136599 10828323 1342712052 610.45 d5_S30_L002_R1_001.fastq.gz, d5_S30_L002_R2_001.fastq.gz, SRR9136599,… SRA
SRR9136600 10068585 1248504540 578.69 d5_S30_L008_R1_001.fastq.gz, d5_S30_L008_R2_001.fastq.gz, SRR9136600,… SRA
SRR9136601 9639912 1195349088 551.69 d5_S31_L006_R1_001.fastq.gz, d5_S31_L006_R2_001.fastq.gz, SRR9136601,… SRA
SRR9136602 5064543 628003332 293.76 d5_S32_L004_R1_001.fastq.gz, d5_S32_L004_R2_001.fastq.gz, SRR9136602,… SRA
SRR9136603 1488738 184603512 89.26 10X_100k_d5_S12_L008_R1_001.fastq.gz, 10X_100k_d5_S12_L008_R2_001.fas… SRA
SRR9136604 9823751 1218145124 616.77 10X_100k_d5_S2_L003_R1_001.fastq.gz, 10X_100k_d5_S2_L003_R2_001.fastq… SRA
SRR9136605 4991842 618988408 314.96 10X_100k_d5_S4_L003_R1_001.fastq.gz, 10X_100k_d5_S4_L003_R2_001.fastq… SRA
SRR9136606 9893367 1226777508 623.61 10X_100k_d5_S2_L001_R1_001.fastq.gz, 10X_100k_d5_S2_L001_R2_001.fastq… SRA
SRR9136607 7052468 874506032 407.49 d5_S29_L005_R1_001.fastq.gz, d5_S29_L005_R2_001.fastq.gz, SRR9136607,… SRA
SRR9136608 10533130 1306108120 601.61 d5_S30_L003_R1_001.fastq.gz, d5_S30_L003_R2_001.fastq.gz, SRR9136608,… SRA
SRR9136609 9886404 1225914096 541.73 d5_S31_L001_R1_001.fastq.gz, d5_S31_L001_R2_001.fastq.gz, SRR9136609,… SRA
SRR9136610 9513064 1179619936 543.92 d5_S31_L007_R1_001.fastq.gz, d5_S31_L007_R2_001.fastq.gz, SRR9136610,… SRA
SRR9136611 5008034 620996216 292.93 d5_S32_L005_R1_001.fastq.gz, d5_S32_L005_R2_001.fastq.gz, SRR9136611,… SRA
SRR9136612 6496861 805610764 409.65 10X_100k_d5_S1_L001_R1_001.fastq.gz, 10X_100k_d5_S1_L001_R2_001.fastq… SRA
SRR9136613 9324461 1156233164 586.6 10X_100k_d5_S3_L001_R1_001.fastq.gz, 10X_100k_d5_S3_L001_R2_001.fastq… SRA
SRR9136614 2000018 248002232 116.8 10X_100k_d5_S9_L008_R1_001.fastq.gz, 10X_100k_d5_S9_L008_R2_001.fastq… SRA
SRR9136615 7045944 873697056 406.56 d5_S29_L006_R1_001.fastq.gz, d5_S29_L006_R2_001.fastq.gz, SRR9136615,… SRA
SRR9136616 10654674 1321179576 608.84 d5_S30_L004_R1_001.fastq.gz, d5_S30_L004_R2_001.fastq.gz, SRR9136616,… SRA
SRR9136617 5094155 631675220 322.9 10X_100k_d5_S4_L001_R1_001.fastq.gz, 10X_100k_d5_S4_L001_R2_001.fastq… SRA
SRR9136618 9870293 1223916332 551.83 d5_S31_L002_R1_001.fastq.gz, d5_S31_L002_R2_001.fastq.gz, SRR9136618,… SRA
SRR9136619 9245452 1146436048 528.55 d5_S31_L008_R1_001.fastq.gz, d5_S31_L008_R2_001.fastq.gz, SRR9136619,… SRA
SRR9136620 5011387 621411988 292.84 d5_S32_L006_R1_001.fastq.gz, d5_S32_L006_R2_001.fastq.gz, SRR9136620,… SRA
SRR9136621 6606197 819168428 414.85 10X_100k_d5_S1_L002_R1_001.fastq.gz, 10X_100k_d5_S1_L002_R2_001.fastq… SRA
SRR9136622 9465401 1173709724 592.65 10X_100k_d5_S3_L002_R1_001.fastq.gz, 10X_100k_d5_S3_L002_R2_001.fastq… SRA
SRR9136623 7286658 903545592 402.61 d5_S29_L001_R1_001.fastq.gz, d5_S29_L001_R2_001.fastq.gz, SRR9136623,… SRA
SRR9136624 6950428 861853072 400.52 d5_S29_L007_R1_001.fastq.gz, d5_S29_L007_R2_001.fastq.gz, SRR9136624,… SRA
SRR9136625 10538218 1306739032 607.7 d5_S30_L005_R1_001.fastq.gz, d5_S30_L005_R2_001.fastq.gz, SRR9136625,… SRA
SRR9136626 9647149 1196246476 548.08 d5_S31_L003_R1_001.fastq.gz, d5_S31_L003_R2_001.fastq.gz, SRR9136626,… SRA
SRR9136627 5184772 642911728 295.8 d5_S32_L001_R1_001.fastq.gz, d5_S32_L001_R2_001.fastq.gz, SRR9136627,… SRA
SRR9136628 7077629 877625996 404.97 d5_S29_L003_R1_001.fastq.gz, d5_S29_L003_R2_001.fastq.gz, SRR9136628,… SRA
SRR9136629 4960088 615050912 289.77 d5_S32_L007_R1_001.fastq.gz, d5_S32_L007_R2_001.fastq.gz, SRR9136629,… SRA
SRR9136630 6418003 795832372 403.35 10X_100k_d5_S1_L003_R1_001.fastq.gz, 10X_100k_d5_S1_L003_R2_001.fastq… SRA
SRR9136631 9194755 1140149620 576.27 10X_100k_d5_S3_L003_R1_001.fastq.gz, 10X_100k_d5_S3_L003_R2_001.fastq… SRA
SRR9136632 7272273 901761852 410.03 d5_S29_L002_R1_001.fastq.gz, d5_S29_L002_R2_001.fastq.gz, SRR9136632,… SRA
SRR9136633 6722816 833629184 387.27 d5_S29_L008_R1_001.fastq.gz, d5_S29_L008_R2_001.fastq.gz, SRR9136633,… SRA
SRR9136634 10539986 1306958264 606.65 d5_S30_L006_R1_001.fastq.gz, d5_S30_L006_R2_001.fastq.gz, SRR9136634,… SRA
SRR9136635 9727245 1206178380 552.61 d5_S31_L004_R1_001.fastq.gz, d5_S31_L004_R2_001.fastq.gz, SRR9136635,… SRA
SRR9136636 5146221 638131404 296.25 d5_S32_L002_R1_001.fastq.gz, d5_S32_L002_R2_001.fastq.gz, SRR9136636,… SRA
SRR9136637 4839233 600064892 283.33 d5_S32_L008_R1_001.fastq.gz, d5_S32_L008_R2_001.fastq.gz, SRR9136637,… SRA
SRR9136638 10808953 1340310172 598.53 d5_S30_L001_R1_001.fastq.gz, d5_S30_L001_R2_001.fastq.gz, SRR9136638,… SRA
SRR9136639 10429185 1293218940 599.43 d5_S30_L007_R1_001.fastq.gz, d5_S30_L007_R2_001.fastq.gz, SRR9136639,… SRA
SRR9136640 9638270 1195145480 552.65 d5_S31_L005_R1_001.fastq.gz, d5_S31_L005_R2_001.fastq.gz, SRR9136640,… SRA
SRR9136641 5023103 622864772 291.48 d5_S32_L003_R1_001.fastq.gz, d5_S32_L003_R2_001.fastq.gz, SRR9136641,… SRA
SRR9136642 2764503 342798372 160.49 10X_100k_d5_S11_L008_R1_001.fastq.gz, 10X_100k_d5_S11_L008_R2_001.fas… SRA
SRX5910209 SRP199655 RNA-Seq PAIRED
GSM3822184: D6_Spleen_scRNA; Mus musculus; RNA-Seq
Sample: SRS4829100
BioProject: PRJNA545114
BioSample: SAMN11874404
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Mus musculus
Sample attributes
source_name: Spleen CD8+ T cell
time point: D6
tissue: spleen
cell type surface markers: CD45+ CD3+ CD8+
cell type: CD8 T cells
Original files (1)
Spleen CD8+ T cell
Runs (48)
Run Spots Bases Size (MB) Files Link
SRR9136643 1459942 181032808 86.99 10X_100k_d6_S13_L008_R1_001.fastq.gz, 10X_100k_d6_S13_L008_R2_001.fas… SRA
SRR9136644 11867775 1471604100 754.99 10X_100k_d6_S6_L001_R1_001.fastq.gz, 10X_100k_d6_S6_L001_R2_001.fastq… SRA
SRR9136645 19507884 2418977616 1243.83 10X_100k_d6_S8_L001_R1_001.fastq.gz, 10X_100k_d6_S8_L001_R2_001.fastq… SRA
SRR9136646 1663106 206225144 96.59 d6_S33_L004_R1_001.fastq.gz, d6_S33_L004_R2_001.fastq.gz, SRR9136646,… SRA
SRR9136647 3319000 411556000 190.1 d6_S34_L002_R1_001.fastq.gz, d6_S34_L002_R2_001.fastq.gz, SRR9136647,… SRA
SRR9136648 3106582 385216168 181.25 d6_S34_L008_R1_001.fastq.gz, d6_S34_L008_R2_001.fastq.gz, SRR9136648,… SRA
SRR9136649 2851347 353567028 166.54 d6_S35_L006_R1_001.fastq.gz, d6_S35_L006_R2_001.fastq.gz, SRR9136649,… SRA
SRR9136650 4925055 610706820 285.55 d6_S36_L004_R1_001.fastq.gz, d6_S36_L004_R2_001.fastq.gz, SRR9136650,… SRA
SRR9136651 2683407 332742468 159.58 10X_100k_d6_S15_L008_R1_001.fastq.gz, 10X_100k_d6_S15_L008_R2_001.fas… SRA
SRR9136652 12167451 1508763924 770.6 10X_100k_d6_S6_L002_R1_001.fastq.gz, 10X_100k_d6_S6_L002_R2_001.fastq… SRA
SRR9136653 19742238 2448037512 1253.38 10X_100k_d6_S8_L002_R1_001.fastq.gz, 10X_100k_d6_S8_L002_R2_001.fastq… SRA
SRR9136654 6216843 770888532 394.65 10X_100k_d6_S5_L003_R1_001.fastq.gz, 10X_100k_d6_S5_L003_R2_001.fastq… SRA
SRR9136655 1648751 204445124 96.64 d6_S33_L005_R1_001.fastq.gz, d6_S33_L005_R2_001.fastq.gz, SRR9136655,… SRA
SRR9136656 3243325 402172300 187.89 d6_S34_L003_R1_001.fastq.gz, d6_S34_L003_R2_001.fastq.gz, SRR9136656,… SRA
SRR9136657 2920699 362166676 164.24 d6_S35_L001_R1_001.fastq.gz, d6_S35_L001_R2_001.fastq.gz, SRR9136657,… SRA
SRR9136658 2817647 349388228 164.41 d6_S35_L007_R1_001.fastq.gz, d6_S35_L007_R2_001.fastq.gz, SRR9136658,… SRA
SRR9136659 4905997 608343628 286.94 d6_S36_L005_R1_001.fastq.gz, d6_S36_L005_R2_001.fastq.gz, SRR9136659,… SRA
SRR9136660 4607770 571363480 273.66 10X_100k_d6_S16_L008_R1_001.fastq.gz, 10X_100k_d6_S16_L008_R2_001.fas… SRA
SRR9136661 11793183 1462354692 747.38 10X_100k_d6_S6_L003_R1_001.fastq.gz, 10X_100k_d6_S6_L003_R2_001.fastq… SRA
SRR9136662 19142794 2373706456 1215.88 10X_100k_d6_S8_L003_R1_001.fastq.gz, 10X_100k_d6_S8_L003_R2_001.fastq… SRA
SRR9136663 1647894 204338856 96.49 d6_S33_L006_R1_001.fastq.gz, d6_S33_L006_R2_001.fastq.gz, SRR9136663,… SRA
SRR9136664 3280316 406759184 190.15 d6_S34_L004_R1_001.fastq.gz, d6_S34_L004_R2_001.fastq.gz, SRR9136664,… SRA
SRR9136665 10776656 1336305344 684.46 10X_100k_d6_S7_L003_R1_001.fastq.gz, 10X_100k_d6_S7_L003_R2_001.fastq… SRA
SRR9136666 2903531 360037844 166.07 d6_S35_L002_R1_001.fastq.gz, d6_S35_L002_R2_001.fastq.gz, SRR9136666,… SRA
SRR9136667 2759426 342168824 161.23 d6_S35_L008_R1_001.fastq.gz, d6_S35_L008_R2_001.fastq.gz, SRR9136667,… SRA
SRR9136668 4897596 607301904 286.1 d6_S36_L006_R1_001.fastq.gz, d6_S36_L006_R2_001.fastq.gz, SRR9136668,… SRA
SRR9136669 6333694 785378056 403.48 10X_100k_d6_S5_L001_R1_001.fastq.gz, 10X_100k_d6_S5_L001_R2_001.fastq… SRA
SRR9136670 11031104 1367856896 703.29 10X_100k_d6_S7_L001_R1_001.fastq.gz, 10X_100k_d6_S7_L001_R2_001.fastq… SRA
SRR9136671 1683095 208703780 94.85 d6_S33_L001_R1_001.fastq.gz, d6_S33_L001_R2_001.fastq.gz, SRR9136671,… SRA
SRR9136672 1628873 201980252 95.3 d6_S33_L007_R1_001.fastq.gz, d6_S33_L007_R2_001.fastq.gz, SRR9136672,… SRA
SRR9136673 3249337 402917788 189.98 d6_S34_L005_R1_001.fastq.gz, d6_S34_L005_R2_001.fastq.gz, SRR9136673,… SRA
SRR9136674 2851514 353587736 165.27 d6_S35_L003_R1_001.fastq.gz, d6_S35_L003_R2_001.fastq.gz, SRR9136674,… SRA
SRR9136675 4990195 618784180 280.4 d6_S36_L001_R1_001.fastq.gz, d6_S36_L001_R2_001.fastq.gz, SRR9136675,… SRA
SRR9136676 1653618 205048632 96.07 d6_S33_L003_R1_001.fastq.gz, d6_S33_L003_R2_001.fastq.gz, SRR9136676,… SRA
SRR9136677 4848588 601224912 282.95 d6_S36_L007_R1_001.fastq.gz, d6_S36_L007_R2_001.fastq.gz, SRR9136677,… SRA
SRR9136678 6396446 793159304 405.68 10X_100k_d6_S5_L002_R1_001.fastq.gz, 10X_100k_d6_S5_L002_R2_001.fastq… SRA
SRR9136679 11112522 1377952728 705.37 10X_100k_d6_S7_L002_R1_001.fastq.gz, 10X_100k_d6_S7_L002_R2_001.fastq… SRA
SRR9136680 1685124 208955376 96.63 d6_S33_L002_R1_001.fastq.gz, d6_S33_L002_R2_001.fastq.gz, SRR9136680,… SRA
SRR9136681 1585222 196567528 92.88 d6_S33_L008_R1_001.fastq.gz, d6_S33_L008_R2_001.fastq.gz, SRR9136681,… SRA
SRR9136682 3256986 403866264 190.16 d6_S34_L006_R1_001.fastq.gz, d6_S34_L006_R2_001.fastq.gz, SRR9136682,… SRA
SRR9136683 2874510 356439240 166.61 d6_S35_L004_R1_001.fastq.gz, d6_S35_L004_R2_001.fastq.gz, SRR9136683,… SRA
SRR9136684 4976346 617066904 284.81 d6_S36_L002_R1_001.fastq.gz, d6_S36_L002_R2_001.fastq.gz, SRR9136684,… SRA
SRR9136685 4735062 587147688 276.54 d6_S36_L008_R1_001.fastq.gz, d6_S36_L008_R2_001.fastq.gz, SRR9136685,… SRA
SRR9136686 3293169 408352956 185.44 d6_S34_L001_R1_001.fastq.gz, d6_S34_L001_R2_001.fastq.gz, SRR9136686,… SRA
SRR9136687 3219048 399161952 187.68 d6_S34_L007_R1_001.fastq.gz, d6_S34_L007_R2_001.fastq.gz, SRR9136687,… SRA
SRR9136688 2847991 353150884 166.5 d6_S35_L005_R1_001.fastq.gz, d6_S35_L005_R2_001.fastq.gz, SRR9136688,… SRA
SRR9136689 4894254 606887496 283.76 d6_S36_L003_R1_001.fastq.gz, d6_S36_L003_R2_001.fastq.gz, SRR9136689,… SRA
SRR9136690 2895412 359031088 172.35 10X_100k_d6_S14_L008_R1_001.fastq.gz, 10X_100k_d6_S14_L008_R2_001.fas… SRA
SRX5910210 SRP199655 RNA-Seq PAIRED
GSM3822185: D7_Spleen_scRNA; Mus musculus; RNA-Seq
Sample: SRS4829101
BioProject: PRJNA545114
BioSample: SAMN11874403
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Mus musculus
Sample attributes
source_name: Spleen CD8+ T cell
time point: D7
tissue: spleen
cell type surface markers: CD45+ CD3+ CD8+
cell type: CD8 T cells
Original files (1)
Spleen CD8+ T cell
Runs (8)
Run Spots Bases Size (MB) Files Link
SRR9136691 13058261 1619224364 816.54 D7_spleen_1_S5_L005_R1_001.fastq.gz, D7_spleen_1_S5_L005_R2_001.fastq… SRA
SRR9136692 13151062 1630731688 794.79 D7_spleen_1_S6_L008_R1_001.fastq.gz, D7_spleen_1_S6_L008_R2_001.fastq… SRA
SRR9136693 9052374 1122494376 565.8 D7_spleen_1_S8_L005_R1_001.fastq.gz, D7_spleen_1_S8_L005_R2_001.fastq… SRA
SRR9136694 15952154 1978067096 966.56 D7_spleen_1_S5_L008_R1_001.fastq.gz, D7_spleen_1_S5_L008_R2_001.fastq… SRA
SRR9136695 7979420 989448080 498.21 D7_spleen_1_S7_L005_R1_001.fastq.gz, D7_spleen_1_S7_L005_R2_001.fastq… SRA
SRR9136696 11256044 1395749456 683.48 D7_spleen_1_S8_L008_R1_001.fastq.gz, D7_spleen_1_S8_L008_R2_001.fastq… SRA
SRR9136697 10320083 1279690292 645.01 D7_spleen_1_S6_L005_R1_001.fastq.gz, D7_spleen_1_S6_L005_R2_001.fastq… SRA
SRR9136698 9790531 1214025844 591.61 D7_spleen_1_S7_L008_R1_001.fastq.gz, D7_spleen_1_S7_L008_R2_001.fastq… SRA
SRX5910211 SRP199655 RNA-Seq PAIRED
GSM3822186: D7_Spleen_scRNA_2; Mus musculus; RNA-Seq
Sample: SRS4829102
BioProject: PRJNA545114
BioSample: SAMN11874402
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Mus musculus
Sample attributes
source_name: Spleen CD8+ T cell
time point: D7
tissue: spleen
cell type surface markers: CD45+ CD3+ CD8+
cell type: CD8 T cells
Original files (1)
Spleen CD8+ T cell
Runs (8)
Run Spots Bases Size (MB) Files Link
SRR9136699 12297207 1524853668 774.65 D7_spleen_2_S10_L005_R1_001.fastq.gz, D7_spleen_2_S10_L005_R2_001.fas… SRA
SRR9136700 13172420 1633380080 793.39 D7_spleen_2_S11_L008_R1_001.fastq.gz, D7_spleen_2_S11_L008_R2_001.fas… SRA
SRR9136701 10702283 1327083092 674.2 D7_spleen_2_S9_L005_R1_001.fastq.gz, D7_spleen_2_S9_L005_R2_001.fastq… SRA
SRR9136702 15702620 1947124880 959.63 D7_spleen_2_S10_L008_R1_001.fastq.gz, D7_spleen_2_S10_L008_R2_001.fas… SRA
SRR9136703 12511782 1551460968 784.92 D7_spleen_2_S12_L005_R1_001.fastq.gz, D7_spleen_2_S12_L005_R2_001.fas… SRA
SRR9136704 13457664 1668750336 819.78 D7_spleen_2_S9_L008_R1_001.fastq.gz, D7_spleen_2_S9_L008_R2_001.fastq… SRA
SRR9136705 10464626 1297613624 654.32 D7_spleen_2_S11_L005_R1_001.fastq.gz, D7_spleen_2_S11_L005_R2_001.fas… SRA
SRR9136706 15800584 1959272416 957.19 D7_spleen_2_S12_L008_R1_001.fastq.gz, D7_spleen_2_S12_L008_R2_001.fas… SRA
SRX5910212 SRP199655 RNA-Seq PAIRED
GSM3822187: D7_Gut_scRNA; Mus musculus; RNA-Seq
Sample: SRS4829103
BioProject: PRJNA545114
BioSample: SAMN11874401
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Mus musculus
Sample attributes
source_name: Gut CD8+ T cell
time point: D7
tissue: gut
cell type surface markers: CD45+ CD3+ CD8+
cell type: CD8 T cells
Original files (1)
Gut CD8+ T cell
Runs (48)
Run Spots Bases Size (MB) Files Link
SRR9136707 1139834 141339416 64.01 d7_TRM_S41_L001_R1_001.fastq.gz, d7_TRM_S41_L001_R2_001.fastq.gz, SRR… SRA
SRR9136708 2485744 308232256 144.34 d7_TRM_S42_L004_R1_001.fastq.gz, d7_TRM_S42_L004_R2_001.fastq.gz, SRR… SRA
SRR9136709 852465 105705660 47.99 d7_TRM_S43_L001_R1_001.fastq.gz, d7_TRM_S43_L001_R2_001.fastq.gz, SRR… SRA
SRR9136710 827220 102575280 48.3 d7_TRM_S43_L006_R1_001.fastq.gz, d7_TRM_S43_L006_R2_001.fastq.gz, SRR… SRA
SRR9136711 1499846 185980904 88.48 d7_TRM_S44_L003_R1_001.fastq.gz, d7_TRM_S44_L003_R2_001.fastq.gz, SRR… SRA
SRR9136712 1443909 179044716 86.11 d7_TRM_S44_L008_R1_001.fastq.gz, d7_TRM_S44_L008_R2_001.fastq.gz, SRR… SRA
SRR9136713 1109600 137590400 64.3 d7_TRM_S41_L003_R1_001.fastq.gz, d7_TRM_S41_L003_R2_001.fastq.gz, SRR… SRA
SRR9136714 1059300 131353200 61.83 d7_TRM_S41_L008_R1_001.fastq.gz, d7_TRM_S41_L008_R2_001.fastq.gz, SRR… SRA
SRR9136715 2472016 306529984 144.73 d7_TRM_S42_L005_R1_001.fastq.gz, d7_TRM_S42_L005_R2_001.fastq.gz, SRR… SRA
SRR9136716 848492 105213008 48.56 d7_TRM_S43_L002_R1_001.fastq.gz, d7_TRM_S43_L002_R2_001.fastq.gz, SRR… SRA
SRR9136717 817824 101410176 47.72 d7_TRM_S43_L007_R1_001.fastq.gz, d7_TRM_S43_L007_R2_001.fastq.gz, SRR… SRA
SRR9136718 1107508 137330992 64.67 d7_TRM_S41_L006_R1_001.fastq.gz, d7_TRM_S41_L006_R2_001.fastq.gz, SRR… SRA
SRR9136719 1511283 187399092 89.14 d7_TRM_S44_L004_R1_001.fastq.gz, d7_TRM_S44_L004_R2_001.fastq.gz, SRR… SRA
SRR9136720 1118445 138687180 64.82 d7_TRM_S41_L004_R1_001.fastq.gz, d7_TRM_S41_L004_R2_001.fastq.gz, SRR… SRA
SRR9136721 2512070 311496680 141.7 d7_TRM_S42_L001_R1_001.fastq.gz, d7_TRM_S42_L001_R2_001.fastq.gz, SRR… SRA
SRR9136722 2468681 306116444 144.33 d7_TRM_S42_L006_R1_001.fastq.gz, d7_TRM_S42_L006_R2_001.fastq.gz, SRR… SRA
SRR9136723 830951 103037924 48.19 d7_TRM_S43_L003_R1_001.fastq.gz, d7_TRM_S43_L003_R2_001.fastq.gz, SRR… SRA
SRR9136724 802242 99478008 46.88 d7_TRM_S43_L008_R1_001.fastq.gz, d7_TRM_S43_L008_R2_001.fastq.gz, SRR… SRA
SRR9136725 1500928 186115072 89.25 d7_TRM_S44_L005_R1_001.fastq.gz, d7_TRM_S44_L005_R2_001.fastq.gz, SRR… SRA
SRR9136726 1105873 137128252 64.67 d7_TRM_S41_L005_R1_001.fastq.gz, d7_TRM_S41_L005_R2_001.fastq.gz, SRR… SRA
SRR9136727 2511177 311385948 144.07 d7_TRM_S42_L002_R1_001.fastq.gz, d7_TRM_S42_L002_R2_001.fastq.gz, SRR… SRA
SRR9136728 2442068 302816432 142.64 d7_TRM_S42_L007_R1_001.fastq.gz, d7_TRM_S42_L007_R2_001.fastq.gz, SRR… SRA
SRR9136729 2466662 305866088 143.26 d7_TRM_S42_L003_R1_001.fastq.gz, d7_TRM_S42_L003_R2_001.fastq.gz, SRR… SRA
SRR9136730 837635 103866740 48.55 d7_TRM_S43_L004_R1_001.fastq.gz, d7_TRM_S43_L004_R2_001.fastq.gz, SRR… SRA
SRR9136731 1532792 190066208 88.29 d7_TRM_S44_L001_R1_001.fastq.gz, d7_TRM_S44_L001_R2_001.fastq.gz, SRR… SRA
SRR9136732 1501886 186233864 89.31 d7_TRM_S44_L006_R1_001.fastq.gz, d7_TRM_S44_L006_R2_001.fastq.gz, SRR… SRA
SRR9136733 7087666 878870584 450.63 10X_100k_TRM_d7_S17_L001_R1_001.fastq.gz, 10X_100k_TRM_d7_S17_L001_R2… SRA
SRR9136734 17307963 2146187412 1099.42 10X_100k_TRM_d7_S18_L001_R1_001.fastq.gz, 10X_100k_TRM_d7_S18_L001_R2… SRA
SRR9136735 5785324 717380176 368.26 10X_100k_TRM_d7_S19_L001_R1_001.fastq.gz, 10X_100k_TRM_d7_S19_L001_R2… SRA
SRR9136736 10670048 1323085952 685.5 10X_100k_TRM_d7_S20_L001_R1_001.fastq.gz, 10X_100k_TRM_d7_S20_L001_R2… SRA
SRR9136737 1911669 237046956 113.33 10X_100k_TRM_d7_S25_L008_R1_001.fastq.gz, 10X_100k_TRM_d7_S25_L008_R2… SRA
SRR9136738 2677893 332058732 162.18 10X_100k_TRM_d7_S28_L008_R1_001.fastq.gz, 10X_100k_TRM_d7_S28_L008_R2… SRA
SRR9136739 7196048 892309952 455.6 10X_100k_TRM_d7_S17_L002_R1_001.fastq.gz, 10X_100k_TRM_d7_S17_L002_R2… SRA
SRR9136740 2376554 294692696 138.87 d7_TRM_S42_L008_R1_001.fastq.gz, d7_TRM_S42_L008_R2_001.fastq.gz, SRR… SRA
SRR9136741 17632870 2186475880 1115.08 10X_100k_TRM_d7_S18_L002_R1_001.fastq.gz, 10X_100k_TRM_d7_S18_L002_R2… SRA
SRR9136742 5809048 720321952 367.93 10X_100k_TRM_d7_S19_L002_R1_001.fastq.gz, 10X_100k_TRM_d7_S19_L002_R2… SRA
SRR9136743 10829012 1342797488 693.22 10X_100k_TRM_d7_S20_L002_R1_001.fastq.gz, 10X_100k_TRM_d7_S20_L002_R2… SRA
SRR9136744 4674710 579664040 276.78 10X_100k_TRM_d7_S26_L008_R1_001.fastq.gz, 10X_100k_TRM_d7_S26_L008_R2… SRA
SRR9136745 6958824 862894176 440.99 10X_100k_TRM_d7_S17_L003_R1_001.fastq.gz, 10X_100k_TRM_d7_S17_L003_R2… SRA
SRR9136746 17090342 2119202408 1081.78 10X_100k_TRM_d7_S18_L003_R1_001.fastq.gz, 10X_100k_TRM_d7_S18_L003_R2… SRA
SRR9136747 5631143 698261732 356.99 10X_100k_TRM_d7_S19_L003_R1_001.fastq.gz, 10X_100k_TRM_d7_S19_L003_R2… SRA
SRR9136748 10497236 1301657264 671.99 10X_100k_TRM_d7_S20_L003_R1_001.fastq.gz, 10X_100k_TRM_d7_S20_L003_R2… SRA
SRR9136749 1485445 184195180 88.33 10X_100k_TRM_d7_S27_L008_R1_001.fastq.gz, 10X_100k_TRM_d7_S27_L008_R2… SRA
SRR9136750 828080 102681920 48.43 d7_TRM_S43_L005_R1_001.fastq.gz, d7_TRM_S43_L005_R2_001.fastq.gz, SRR… SRA
SRR9136751 1532746 190060504 89.57 d7_TRM_S44_L002_R1_001.fastq.gz, d7_TRM_S44_L002_R2_001.fastq.gz, SRR… SRA
SRR9136752 1484233 184044892 88.28 d7_TRM_S44_L007_R1_001.fastq.gz, d7_TRM_S44_L007_R2_001.fastq.gz, SRR… SRA
SRR9136753 1136091 140875284 64.95 d7_TRM_S41_L002_R1_001.fastq.gz, d7_TRM_S41_L002_R2_001.fastq.gz, SRR… SRA
SRR9136754 1091262 135316488 63.67 d7_TRM_S41_L007_R1_001.fastq.gz, d7_TRM_S41_L007_R2_001.fastq.gz, SRR… SRA
SRX5910213 SRP199655 RNA-Seq PAIRED
GSM3822188: D10_Spleen_scRNA; Mus musculus; RNA-Seq
Sample: SRS4829104
BioProject: PRJNA545114
BioSample: SAMN11874400
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Mus musculus
Sample attributes
source_name: Spleen CD8+ T cell
time point: D10
tissue: spleen
cell type surface markers: CD45+ CD3+ CD8+
cell type: CD8 T cells
Original files (1)
Spleen CD8+ T cell
Runs (8)
Run Spots Bases Size (MB) Files Link
SRR9136755 6777681 840432444 419.56 Day_10_P14_Armstrong_Spleen_1_S1_L006_R1_001.fastq.gz, Day_10_P14_Arm… SRA
SRR9136756 8984985 1114138140 550.76 Day_10_P14_Armstrong_Spleen_1_S3_L006_R1_001.fastq.gz, Day_10_P14_Arm… SRA
SRR9136757 6673113 827466012 411.63 Day_10_P14_Armstrong_Spleen_1_S1_L007_R1_001.fastq.gz, Day_10_P14_Arm… SRA
SRR9136758 8846959 1097022916 538.46 Day_10_P14_Armstrong_Spleen_1_S3_L007_R1_001.fastq.gz, Day_10_P14_Arm… SRA
SRR9136759 4871820 604105680 290.93 Day_10_P14_Armstrong_Spleen_1_S2_L006_R1_001.fastq.gz, Day_10_P14_Arm… SRA
SRR9136760 7167749 888800876 427.3 Day_10_P14_Armstrong_Spleen_1_S4_L006_R1_001.fastq.gz, Day_10_P14_Arm… SRA
SRR9136761 4820897 597791228 286.47 Day_10_P14_Armstrong_Spleen_1_S2_L007_R1_001.fastq.gz, Day_10_P14_Arm… SRA
SRR9136762 7070126 876695624 419.1 Day_10_P14_Armstrong_Spleen_1_S4_L007_R1_001.fastq.gz, Day_10_P14_Arm… SRA
SRX5910214 SRP199655 RNA-Seq PAIRED
GSM3822189: D10_Spleen_scRNA_2; Mus musculus; RNA-Seq
Sample: SRS4829105
BioProject: PRJNA545114
BioSample: SAMN11874399
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Mus musculus
Sample attributes
source_name: Spleen CD8+ T cell
time point: D10
tissue: spleen
cell type surface markers: CD45+ CD3+ CD8+
cell type: CD8 T cells
Original files (1)
Spleen CD8+ T cell
Runs (8)
Run Spots Bases Size (MB) Files Link
SRR9136763 5526792 685322208 330.4 Day_10_P14_Armstrong_Spleen_2_S5_L006_R1_001.fastq.gz, Day_10_P14_Arm… SRA
SRR9136764 9007604 1116942896 532.01 Day_10_P14_Armstrong_Spleen_2_S7_L006_R1_001.fastq.gz, Day_10_P14_Arm… SRA
SRR9136765 5464030 677539720 325.17 Day_10_P14_Armstrong_Spleen_2_S5_L007_R1_001.fastq.gz, Day_10_P14_Arm… SRA
SRR9136766 8910729 1104930396 523.35 Day_10_P14_Armstrong_Spleen_2_S7_L007_R1_001.fastq.gz, Day_10_P14_Arm… SRA
SRR9136767 8694032 1078059968 520.54 Day_10_P14_Armstrong_Spleen_2_S6_L006_R1_001.fastq.gz, Day_10_P14_Arm… SRA
SRR9136768 5800396 719249104 346.51 Day_10_P14_Armstrong_Spleen_2_S8_L006_R1_001.fastq.gz, Day_10_P14_Arm… SRA
SRR9136769 8577660 1063629840 511.13 Day_10_P14_Armstrong_Spleen_2_S6_L007_R1_001.fastq.gz, Day_10_P14_Arm… SRA
SRR9136770 5723514 709715736 340.14 Day_10_P14_Armstrong_Spleen_2_S8_L007_R1_001.fastq.gz, Day_10_P14_Arm… SRA
SRX5910215 SRP199655 RNA-Seq PAIRED
GSM3822190: D10_Gut_scRNA; Mus musculus; RNA-Seq
Sample: SRS4829106
BioProject: PRJNA545114
BioSample: SAMN11874398
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Mus musculus
Sample attributes
source_name: Gut CD8+ T cell
time point: D10
tissue: gut
cell type surface markers: CD45+ CD3+ CD8+
cell type: CD8 T cells
Original files (1)
Gut CD8+ T cell
Runs (28)
Run Spots Bases Size (MB) Files Link
SRR9136771 1627 201748 0.19 10X_d10_TRM_S13_L001_R1_001.fastq.gz, 10X_d10_TRM_S13_L001_R2_001.fas… SRA
SRR9136772 4733589 586965036 304.3 10X_d10_TRM_S15_L002_R1_001.fastq.gz, 10X_d10_TRM_S15_L002_R2_001.fas… SRA
SRR9136773 6293677 780415948 407.1 10X_d10_TRM_S16_L002_R1_001.fastq.gz, 10X_d10_TRM_S16_L002_R2_001.fas… SRA
SRR9136774 7548473 936010652 448.26 10X_d10_TRM_S22_L008_R1_001.fastq.gz, 10X_d10_TRM_S22_L008_R2_001.fas… SRA
SRR9136775 4993656 619213344 294.23 d10_TRM_S13_L002_R1_001.fastq.gz, d10_TRM_S13_L002_R2_001.fastq.gz, S… SRA
SRR9136776 11224299 1391813076 659.77 d10_TRM_S15_L002_R1_001.fastq.gz, d10_TRM_S15_L002_R2_001.fastq.gz, S… SRA
SRR9136777 1806749 224036876 119.05 10X_d10_TRM_S13_L003_R1_001.fastq.gz, 10X_d10_TRM_S13_L003_R2_001.fas… SRA
SRR9136778 3474500 430838000 228.98 10X_d10_TRM_S14_L003_R1_001.fastq.gz, 10X_d10_TRM_S14_L003_R2_001.fas… SRA
SRR9136779 3670848 455185152 242.17 10X_d10_TRM_S15_L003_R1_001.fastq.gz, 10X_d10_TRM_S15_L003_R2_001.fas… SRA
SRR9136780 4886478 605923272 323.09 10X_d10_TRM_S16_L003_R1_001.fastq.gz, 10X_d10_TRM_S16_L003_R2_001.fas… SRA
SRR9136781 8245810 1022480440 490.49 10X_d10_TRM_S23_L008_R1_001.fastq.gz, 10X_d10_TRM_S23_L008_R2_001.fas… SRA
SRR9136782 1374 170376 0.17 10X_d10_TRM_S14_L001_R1_001.fastq.gz, 10X_d10_TRM_S14_L001_R2_001.fas… SRA
SRR9136783 10062951 1247805924 593.1 d10_TRM_S14_L001_R1_001.fastq.gz, d10_TRM_S14_L001_R2_001.fastq.gz, S… SRA
SRR9136784 14048634 1742030616 845.18 d10_TRM_S16_L001_R1_001.fastq.gz, d10_TRM_S16_L001_R2_001.fastq.gz, S… SRA
SRR9136785 1892631 234686244 123.91 10X_d10_TRM_S13_L004_R1_001.fastq.gz, 10X_d10_TRM_S13_L004_R2_001.fas… SRA
SRR9136786 3670952 455198048 240.44 10X_d10_TRM_S14_L004_R1_001.fastq.gz, 10X_d10_TRM_S14_L004_R2_001.fas… SRA
SRR9136787 3878162 480892088 254.21 10X_d10_TRM_S15_L004_R1_001.fastq.gz, 10X_d10_TRM_S15_L004_R2_001.fas… SRA
SRR9136788 5152594 638921656 339.01 10X_d10_TRM_S16_L004_R1_001.fastq.gz, 10X_d10_TRM_S16_L004_R2_001.fas… SRA
SRR9136789 11134637 1380694988 674.12 10X_d10_TRM_S24_L008_R1_001.fastq.gz, 10X_d10_TRM_S24_L008_R2_001.fas… SRA
SRR9136790 10002633 1240326492 589.04 d10_TRM_S14_L002_R1_001.fastq.gz, d10_TRM_S14_L002_R2_001.fastq.gz, S… SRA
SRR9136791 13987589 1734461036 840.63 d10_TRM_S16_L002_R1_001.fastq.gz, d10_TRM_S16_L002_R2_001.fastq.gz, S… SRA
SRR9136792 1333 165292 0.17 10X_d10_TRM_S15_L001_R1_001.fastq.gz, 10X_d10_TRM_S15_L001_R2_001.fas… SRA
SRR9136793 1613 200012 0.18 10X_d10_TRM_S16_L001_R1_001.fastq.gz, 10X_d10_TRM_S16_L001_R2_001.fas… SRA
SRR9136794 4032608 500043392 242.04 10X_d10_TRM_S21_L008_R1_001.fastq.gz, 10X_d10_TRM_S21_L008_R2_001.fas… SRA
SRR9136795 5018430 622285320 295.83 d10_TRM_S13_L001_R1_001.fastq.gz, d10_TRM_S13_L001_R2_001.fastq.gz, S… SRA
SRR9136796 11241330 1393924920 661.49 d10_TRM_S15_L001_R1_001.fastq.gz, d10_TRM_S15_L001_R2_001.fastq.gz, S… SRA
SRR9136797 2293423 284384452 147.29 10X_d10_TRM_S13_L002_R1_001.fastq.gz, 10X_d10_TRM_S13_L002_R2_001.fas… SRA
SRR9136798 4467607 553983268 287.21 10X_d10_TRM_S14_L002_R1_001.fastq.gz, 10X_d10_TRM_S14_L002_R2_001.fas… SRA
SRX5910216 SRP199655 RNA-Seq PAIRED
GSM3822191: D14_Spleen_scRNA; Mus musculus; RNA-Seq
Sample: SRS4829107
BioProject: PRJNA545114
BioSample: SAMN11874397
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Mus musculus
Sample attributes
source_name: Spleen CD8+ T cell
time point: D14
tissue: spleen
cell type surface markers: CD45+ CD3+ CD8+
cell type: CD8 T cells
Original files (1)
Spleen CD8+ T cell
Runs (8)
Run Spots Bases Size (MB) Files Link
SRR9136799 5524128 684991872 328.21 Day_14_P14_Armstrong_Spleen_1_S10_L006_R1_001.fastq.gz, Day_14_P14_Ar… SRA
SRR9136800 9640649 1195440476 570.47 Day_14_P14_Armstrong_Spleen_1_S12_L006_R1_001.fastq.gz, Day_14_P14_Ar… SRA
SRR9136801 5447245 675458380 321.96 Day_14_P14_Armstrong_Spleen_1_S10_L007_R1_001.fastq.gz, Day_14_P14_Ar… SRA
SRR9136802 9504416 1178547584 559.43 Day_14_P14_Armstrong_Spleen_1_S12_L007_R1_001.fastq.gz, Day_14_P14_Ar… SRA
SRR9136803 3425390 424748360 209.7 Day_14_P14_Armstrong_Spleen_1_S11_L006_R1_001.fastq.gz, Day_14_P14_Ar… SRA
SRR9136804 9424792 1168674208 560.38 Day_14_P14_Armstrong_Spleen_1_S9_L006_R1_001.fastq.gz, Day_14_P14_Arm… SRA
SRR9136805 3384434 419669816 206.52 Day_14_P14_Armstrong_Spleen_1_S11_L007_R1_001.fastq.gz, Day_14_P14_Ar… SRA
SRR9136806 9296302 1152741448 550.08 Day_14_P14_Armstrong_Spleen_1_S9_L007_R1_001.fastq.gz, Day_14_P14_Arm… SRA
SRX5910217 SRP199655 RNA-Seq PAIRED
GSM3822192: D14_Spleen_scRNA_2; Mus musculus; RNA-Seq
Sample: SRS4829108
BioProject: PRJNA545114
BioSample: SAMN11874396
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Mus musculus
Sample attributes
source_name: Spleen CD8+ T cell
time point: D14
tissue: spleen
cell type surface markers: CD45+ CD3+ CD8+
cell type: CD8 T cells
Original files (1)
Spleen CD8+ T cell
Runs (8)
Run Spots Bases Size (MB) Files Link
SRR9136807 6979929 865511196 411.89 Day_14_P14_Armstrong_Spleen_2_S13_L006_R1_001.fastq.gz, Day_14_P14_Ar… SRA
SRR9136808 5969119 740170756 354.7 Day_14_P14_Armstrong_Spleen_2_S15_L006_R1_001.fastq.gz, Day_14_P14_Ar… SRA
SRR9136809 6870787 851977588 403.37 Day_14_P14_Armstrong_Spleen_2_S13_L007_R1_001.fastq.gz, Day_14_P14_Ar… SRA
SRR9136810 5871658 728085592 347.45 Day_14_P14_Armstrong_Spleen_2_S15_L007_R1_001.fastq.gz, Day_14_P14_Ar… SRA
SRR9136811 4608317 571431308 272.34 Day_14_P14_Armstrong_Spleen_2_S14_L006_R1_001.fastq.gz, Day_14_P14_Ar… SRA
SRR9136812 5269520 653420480 312.64 Day_14_P14_Armstrong_Spleen_2_S16_L006_R1_001.fastq.gz, Day_14_P14_Ar… SRA
SRR9136813 4541729 563174396 267.08 Day_14_P14_Armstrong_Spleen_2_S14_L007_R1_001.fastq.gz, Day_14_P14_Ar… SRA
SRR9136814 5193083 643942292 306.55 Day_14_P14_Armstrong_Spleen_2_S16_L007_R1_001.fastq.gz, Day_14_P14_Ar… SRA
SRX5910218 SRP199655 RNA-Seq PAIRED
GSM3822193: D14_Gut_scRNA; Mus musculus; RNA-Seq
Sample: SRS4829109
BioProject: PRJNA545114
BioSample: SAMN11874395
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Mus musculus
Sample attributes
source_name: Gut CD8+ T cell
time point: D14
tissue: gut
cell type surface markers: CD45+ CD3+ CD8+
cell type: CD8 T cells
Original files (1)
Gut CD8+ T cell
Runs (20)
Run Spots Bases Size (MB) Files Link
SRR9136815 801 99324 0.13 10X_d14_TRM_S17_L001_R1_001.fastq.gz, 10X_d14_TRM_S17_L001_R2_001.fas… SRA
SRR9136816 3119905 386868220 200.85 10X_d14_TRM_S17_L002_R1_001.fastq.gz, 10X_d14_TRM_S17_L002_R2_001.fas… SRA
SRR9136817 3009 373116 0.28 10X_d14_TRM_S19_L001_R1_001.fastq.gz, 10X_d14_TRM_S19_L001_R2_001.fas… SRA
SRR9136818 3754021 465498604 245.95 10X_d14_TRM_S20_L004_R1_001.fastq.gz, 10X_d14_TRM_S20_L004_R2_001.fas… SRA
SRR9136819 3157328 391508672 203.39 10X_d14_TRM_S18_L002_R1_001.fastq.gz, 10X_d14_TRM_S18_L002_R2_001.fas… SRA
SRR9136820 982 121768 0.14 10X_d14_TRM_S20_L001_R1_001.fastq.gz, 10X_d14_TRM_S20_L001_R2_001.fas… SRA
SRR9136821 11064620 1372012880 656.39 10X_d14_TRM_S28_L008_R1_001.fastq.gz, 10X_d14_TRM_S28_L008_R2_001.fas… SRA
SRR9136822 2424413 300627212 160.06 10X_d14_TRM_S17_L003_R1_001.fastq.gz, 10X_d14_TRM_S17_L003_R2_001.fas… SRA
SRR9136823 4390181 544382444 282.27 10X_d14_TRM_S19_L002_R1_001.fastq.gz, 10X_d14_TRM_S19_L002_R2_001.fas… SRA
SRR9136824 7600819 942501556 452.22 10X_d14_TRM_S25_L008_R1_001.fastq.gz, 10X_d14_TRM_S25_L008_R2_001.fas… SRA
SRR9136825 2457696 304754304 162.22 10X_d14_TRM_S18_L003_R1_001.fastq.gz, 10X_d14_TRM_S18_L003_R2_001.fas… SRA
SRR9136826 2544697 315542428 166.99 10X_d14_TRM_S17_L004_R1_001.fastq.gz, 10X_d14_TRM_S17_L004_R2_001.fas… SRA
SRR9136827 4581227 568072148 294.25 10X_d14_TRM_S20_L002_R1_001.fastq.gz, 10X_d14_TRM_S20_L002_R2_001.fas… SRA
SRR9136828 2586045 320669580 169.67 10X_d14_TRM_S18_L004_R1_001.fastq.gz, 10X_d14_TRM_S18_L004_R2_001.fas… SRA
SRR9136829 3448387 427599988 227.45 10X_d14_TRM_S19_L003_R1_001.fastq.gz, 10X_d14_TRM_S19_L003_R2_001.fas… SRA
SRR9136830 3540467 439017908 233.51 10X_d14_TRM_S20_L003_R1_001.fastq.gz, 10X_d14_TRM_S20_L003_R2_001.fas… SRA
SRR9136831 7695824 954282176 459.81 10X_d14_TRM_S26_L008_R1_001.fastq.gz, 10X_d14_TRM_S26_L008_R2_001.fas… SRA
SRR9136832 853 105772 0.14 10X_d14_TRM_S18_L001_R1_001.fastq.gz, 10X_d14_TRM_S18_L001_R2_001.fas… SRA
SRR9136833 3626711 449712164 237.71 10X_d14_TRM_S19_L004_R1_001.fastq.gz, 10X_d14_TRM_S19_L004_R2_001.fas… SRA
SRR9136834 10602863 1314755012 631.15 10X_d14_TRM_S27_L008_R1_001.fastq.gz, 10X_d14_TRM_S27_L008_R2_001.fas… SRA
SRX5910219 SRP199655 RNA-Seq PAIRED
GSM3822194: D21_Spleen_scRNA; Mus musculus; RNA-Seq
Sample: SRS4829110
BioProject: PRJNA545114
BioSample: SAMN11874394
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Mus musculus
Sample attributes
source_name: Spleen CD8+ T cell
time point: D21
tissue: spleen
cell type surface markers: CD45+ CD3+ CD8+
cell type: CD8 T cells
Original files (1)
Spleen CD8+ T cell
Runs (8)
Run Spots Bases Size (MB) Files Link
SRR9136835 10937381 1356235244 648.1 Day_21_P14_Armstrong_Spleen_1_S17_L006_R1_001.fastq.gz, Day_21_P14_Ar… SRA
SRR9136836 7207497 893729628 430.06 Day_21_P14_Armstrong_Spleen_1_S19_L006_R1_001.fastq.gz, Day_21_P14_Ar… SRA
SRR9136837 10774350 1336019400 635.01 Day_21_P14_Armstrong_Spleen_1_S17_L007_R1_001.fastq.gz, Day_21_P14_Ar… SRA
SRR9136838 7114276 882170224 422.32 Day_21_P14_Armstrong_Spleen_1_S19_L007_R1_001.fastq.gz, Day_21_P14_Ar… SRA
SRR9136839 4385826 543842424 266.54 Day_21_P14_Armstrong_Spleen_1_S18_L006_R1_001.fastq.gz, Day_21_P14_Ar… SRA
SRR9136840 4326731 536514644 261.9 Day_21_P14_Armstrong_Spleen_1_S18_L007_R1_001.fastq.gz, Day_21_P14_Ar… SRA
SRR9136841 7018181 870254444 420.45 Day_21_P14_Armstrong_Spleen_1_S20_L006_R1_001.fastq.gz, Day_21_P14_Ar… SRA
SRR9136842 6929803 859295572 413.18 Day_21_P14_Armstrong_Spleen_1_S20_L007_R1_001.fastq.gz, Day_21_P14_Ar… SRA
SRX5910220 SRP199655 RNA-Seq PAIRED
GSM3822195: D21_Spleen_scRNA_2; Mus musculus; RNA-Seq
Sample: SRS4829111
BioProject: PRJNA545114
BioSample: SAMN11874393
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Mus musculus
Sample attributes
source_name: Spleen CD8+ T cell
time point: D21
tissue: spleen
cell type surface markers: CD45+ CD3+ CD8+
cell type: CD8 T cells
Original files (1)
Spleen CD8+ T cell
Runs (8)
Run Spots Bases Size (MB) Files Link
SRR9136843 8987833 1114491292 537.45 Day_21_P14_Armstrong_Spleen_2_S21_L006_R1_001.fastq.gz, Day_21_P14_Ar… SRA
SRR9136844 10051397 1246373228 597.63 Day_21_P14_Armstrong_Spleen_2_S23_L006_R1_001.fastq.gz, Day_21_P14_Ar… SRA
SRR9136845 8888522 1102176728 529.17 Day_21_P14_Armstrong_Spleen_2_S21_L007_R1_001.fastq.gz, Day_21_P14_Ar… SRA
SRR9136846 9909688 1228801312 586.04 Day_21_P14_Armstrong_Spleen_2_S23_L007_R1_001.fastq.gz, Day_21_P14_Ar… SRA
SRR9136847 5210180 646062320 314.82 Day_21_P14_Armstrong_Spleen_2_S22_L006_R1_001.fastq.gz, Day_21_P14_Ar… SRA
SRR9136848 5134079 636625796 308.91 Day_21_P14_Armstrong_Spleen_2_S22_L007_R1_001.fastq.gz, Day_21_P14_Ar… SRA
SRR9136849 7827164 970568336 466.96 Day_21_P14_Armstrong_Spleen_2_S24_L006_R1_001.fastq.gz, Day_21_P14_Ar… SRA
SRR9136850 7732238 958797512 458.87 Day_21_P14_Armstrong_Spleen_2_S24_L007_R1_001.fastq.gz, Day_21_P14_Ar… SRA
SRX5910221 SRP199655 RNA-Seq PAIRED
GSM3822196: D21_Gut_scRNA; Mus musculus; RNA-Seq
Sample: SRS4829112
BioProject: PRJNA545114
BioSample: SAMN11874392
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Mus musculus
Sample attributes
source_name: Gut CD8+ T cell
time point: D21
tissue: gut
cell type surface markers: CD45+ CD3+ CD8+
cell type: CD8 T cells
Original files (1)
Gut CD8+ T cell
Runs (28)
Run Spots Bases Size (MB) Files Link
SRR9136851 7139 885236 0.53 10X_d21_TRM_S21_L001_R1_001.fastq.gz, 10X_d21_TRM_S21_L001_R2_001.fas… SRA
SRR9136852 2002802 248347448 129.13 10X_d21_TRM_S23_L002_R1_001.fastq.gz, 10X_d21_TRM_S23_L002_R2_001.fas… SRA
SRR9136853 3761901 466475724 242.1 10X_d21_TRM_S24_L002_R1_001.fastq.gz, 10X_d21_TRM_S24_L002_R2_001.fas… SRA
SRR9136854 9595842 1189884408 582.94 10X_d21_TRM_S30_L008_R1_001.fastq.gz, 10X_d21_TRM_S30_L008_R2_001.fas… SRA
SRR9136855 4272839 529832036 252.79 d21_TRM_S21_L002_R1_001.fastq.gz, d21_TRM_S21_L002_R2_001.fastq.gz, S… SRA
SRR9136856 4092313 507446812 240.96 d21_TRM_S23_L002_R1_001.fastq.gz, d21_TRM_S23_L002_R2_001.fastq.gz, S… SRA
SRR9136857 1705964 211539536 112.43 10X_d21_TRM_S21_L003_R1_001.fastq.gz, 10X_d21_TRM_S21_L003_R2_001.fas… SRA
SRR9136858 2580707 320007668 170.56 10X_d21_TRM_S22_L003_R1_001.fastq.gz, 10X_d21_TRM_S22_L003_R2_001.fas… SRA
SRR9136859 1571051 194810324 103.84 10X_d21_TRM_S23_L003_R1_001.fastq.gz, 10X_d21_TRM_S23_L003_R2_001.fas… SRA
SRR9136860 2914207 361361668 192.32 10X_d21_TRM_S24_L003_R1_001.fastq.gz, 10X_d21_TRM_S24_L003_R2_001.fas… SRA
SRR9136861 6071668 752886832 362.28 10X_d21_TRM_S31_L008_R1_001.fastq.gz, 10X_d21_TRM_S31_L008_R2_001.fas… SRA
SRR9136862 740 91760 0.13 10X_d21_TRM_S22_L001_R1_001.fastq.gz, 10X_d21_TRM_S22_L001_R2_001.fas… SRA
SRR9136863 7021184 870626816 422.68 d21_TRM_S22_L001_R1_001.fastq.gz, d21_TRM_S22_L001_R2_001.fastq.gz, S… SRA
SRR9136864 7647335 948269540 451.17 d21_TRM_S24_L001_R1_001.fastq.gz, d21_TRM_S24_L001_R2_001.fastq.gz, S… SRA
SRR9136865 1792436 222262064 117.4 10X_d21_TRM_S21_L004_R1_001.fastq.gz, 10X_d21_TRM_S21_L004_R2_001.fas… SRA
SRR9136866 2726236 338053264 179.17 10X_d21_TRM_S22_L004_R1_001.fastq.gz, 10X_d21_TRM_S22_L004_R2_001.fas… SRA
SRR9136867 1647099 204240276 108.21 10X_d21_TRM_S23_L004_R1_001.fastq.gz, 10X_d21_TRM_S23_L004_R2_001.fas… SRA
SRR9136868 3072617 381004508 201.52 10X_d21_TRM_S24_L004_R1_001.fastq.gz, 10X_d21_TRM_S24_L004_R2_001.fas… SRA
SRR9136869 11672773 1447423852 696.29 10X_d21_TRM_S32_L008_R1_001.fastq.gz, 10X_d21_TRM_S32_L008_R2_001.fas… SRA
SRR9136870 6954280 862330720 420.52 d21_TRM_S22_L002_R1_001.fastq.gz, d21_TRM_S22_L002_R2_001.fastq.gz, S… SRA
SRR9136871 7661053 949970572 451.63 d21_TRM_S24_L002_R1_001.fastq.gz, d21_TRM_S24_L002_R2_001.fastq.gz, S… SRA
SRR9136872 1143 141732 0.16 10X_d21_TRM_S23_L001_R1_001.fastq.gz, 10X_d21_TRM_S23_L001_R2_001.fas… SRA
SRR9136873 809 100316 0.13 10X_d21_TRM_S24_L001_R1_001.fastq.gz, 10X_d21_TRM_S24_L001_R2_001.fas… SRA
SRR9136874 6235049 773146076 373.11 10X_d21_TRM_S29_L008_R1_001.fastq.gz, 10X_d21_TRM_S29_L008_R2_001.fas… SRA
SRR9136875 4282416 531019584 253.5 d21_TRM_S21_L001_R1_001.fastq.gz, d21_TRM_S21_L001_R2_001.fastq.gz, S… SRA
SRR9136876 4113647 510092228 242.39 d21_TRM_S23_L001_R1_001.fastq.gz, d21_TRM_S23_L001_R2_001.fastq.gz, S… SRA
SRR9136877 2163866 268319384 139.14 10X_d21_TRM_S21_L002_R1_001.fastq.gz, 10X_d21_TRM_S21_L002_R2_001.fas… SRA
SRR9136878 3345287 414815588 215.8 10X_d21_TRM_S22_L002_R1_001.fastq.gz, 10X_d21_TRM_S22_L002_R2_001.fas… SRA
SRX5910222 SRP199655 RNA-Seq PAIRED
GSM3822197: D32_Spleen_scRNA; Mus musculus; RNA-Seq
Sample: SRS4829113
BioProject: PRJNA545114
BioSample: SAMN11874391
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Mus musculus
Sample attributes
source_name: Spleen CD8+ T cell
time point: D32
tissue: spleen
cell type surface markers: CD45+ CD3+ CD8+
cell type: CD8 T cells
Original files (1)
Spleen CD8+ T cell
Runs (8)
Run Spots Bases Size (MB) Files Link
SRR9136879 4580042 567925208 272.93 Day_32_P14_Armstrong_Spleen_1_S25_L006_R1_001.fastq.gz, Day_32_P14_Ar… SRA
SRR9136880 9872336 1224169664 586.56 Day_32_P14_Armstrong_Spleen_1_S27_L006_R1_001.fastq.gz, Day_32_P14_Ar… SRA
SRR9136881 4520231 560508644 268.1 Day_32_P14_Armstrong_Spleen_1_S25_L007_R1_001.fastq.gz, Day_32_P14_Ar… SRA
SRR9136882 9756745 1209836380 576.87 Day_32_P14_Armstrong_Spleen_1_S27_L007_R1_001.fastq.gz, Day_32_P14_Ar… SRA
SRR9136883 6484863 804123012 386.04 Day_32_P14_Armstrong_Spleen_1_S26_L006_R1_001.fastq.gz, Day_32_P14_Ar… SRA
SRR9136884 8714754 1080629496 518.79 Day_32_P14_Armstrong_Spleen_1_S28_L006_R1_001.fastq.gz, Day_32_P14_Ar… SRA
SRR9136885 6404147 794114228 379.23 Day_32_P14_Armstrong_Spleen_1_S26_L007_R1_001.fastq.gz, Day_32_P14_Ar… SRA
SRR9136886 8604687 1066981188 509.65 Day_32_P14_Armstrong_Spleen_1_S28_L007_R1_001.fastq.gz, Day_32_P14_Ar… SRA
SRX5910223 SRP199655 RNA-Seq PAIRED
GSM3822198: D32_Gut_scRNA; Mus musculus; RNA-Seq
Sample: SRS4829114
BioProject: PRJNA545114
BioSample: SAMN11874390
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Mus musculus
Sample attributes
source_name: Gut CD8+ T cell
time point: D32
tissue: gut
cell type surface markers: CD45+ CD3+ CD8+
cell type: CD8 T cells
Original files (1)
Gut CD8+ T cell
Runs (8)
Run Spots Bases Size (MB) Files Link
SRR9136887 6293319 780371556 375.89 Day_32_P14_Armstrong_IEL_1_S33_L006_R1_001.fastq.gz, Day_32_P14_Armst… SRA
SRR9136888 5910012 732841488 353.48 Day_32_P14_Armstrong_IEL_1_S35_L006_R1_001.fastq.gz, Day_32_P14_Armst… SRA
SRR9136889 6198821 768653804 368.21 Day_32_P14_Armstrong_IEL_1_S33_L007_R1_001.fastq.gz, Day_32_P14_Armst… SRA
SRR9136890 5834708 723503792 347.21 Day_32_P14_Armstrong_IEL_1_S35_L007_R1_001.fastq.gz, Day_32_P14_Armst… SRA
SRR9136891 4275362 530144888 255.07 Day_32_P14_Armstrong_IEL_1_S34_L006_R1_001.fastq.gz, Day_32_P14_Armst… SRA
SRR9136892 7770170 963501080 465.66 Day_32_P14_Armstrong_IEL_1_S36_L006_R1_001.fastq.gz, Day_32_P14_Armst… SRA
SRR9136893 4224890 523886360 250.76 Day_32_P14_Armstrong_IEL_1_S34_L007_R1_001.fastq.gz, Day_32_P14_Armst… SRA
SRR9136894 7662319 950127556 457.0 Day_32_P14_Armstrong_IEL_1_S36_L007_R1_001.fastq.gz, Day_32_P14_Armst… SRA
SRX5910224 SRP199655 RNA-Seq PAIRED
GSM3822199: D32_Gut_scRNA_2; Mus musculus; RNA-Seq
Sample: SRS4829115
BioProject: PRJNA545114
BioSample: SAMN11874389
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Mus musculus
Sample attributes
source_name: Gut CD8+ T cell
time point: D32
tissue: gut
cell type surface markers: CD45+ CD3+ CD8+
cell type: CD8 T cells
Original files (1)
Gut CD8+ T cell
Runs (8)
Run Spots Bases Size (MB) Files Link
SRR9136895 7167209 888733916 428.04 Day_32_P14_Armstrong_IEL_3_S37_L006_R1_001.fastq.gz, Day_32_P14_Armst… SRA
SRR9136896 6639789 823333836 393.54 Day_32_P14_Armstrong_IEL_3_S39_L006_R1_001.fastq.gz, Day_32_P14_Armst… SRA
SRR9136897 7046512 873767488 418.57 Day_32_P14_Armstrong_IEL_3_S37_L007_R1_001.fastq.gz, Day_32_P14_Armst… SRA
SRR9136898 6543022 811334728 385.84 Day_32_P14_Armstrong_IEL_3_S39_L007_R1_001.fastq.gz, Day_32_P14_Armst… SRA
SRR9136899 6845692 848865808 407.22 Day_32_P14_Armstrong_IEL_3_S38_L006_R1_001.fastq.gz, Day_32_P14_Armst… SRA
SRR9136900 5087868 630895632 301.27 Day_32_P14_Armstrong_IEL_3_S40_L006_R1_001.fastq.gz, Day_32_P14_Armst… SRA
SRR9136901 6755281 837654844 400.03 Day_32_P14_Armstrong_IEL_3_S38_L007_R1_001.fastq.gz, Day_32_P14_Armst… SRA
SRR9136902 5013193 621635932 295.35 Day_32_P14_Armstrong_IEL_3_S40_L007_R1_001.fastq.gz, Day_32_P14_Armst… SRA
SRX5910225 SRP199655 RNA-Seq PAIRED
GSM3822200: D60_Spleen_scRNA; Mus musculus; RNA-Seq
Sample: SRS4829116
BioProject: PRJNA545114
BioSample: SAMN11874388
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Mus musculus
Sample attributes
source_name: Spleen CD8+ T cell
time point: D60
tissue: spleen
cell type surface markers: CD45+ CD3+ CD8+
cell type: CD8 T cells
Original files (1)
Spleen CD8+ T cell
Runs (8)
Run Spots Bases Size (MB) Files Link
SRR9136903 6288709 779799916 377.28 Day_60_P14_Armstrong_Spleen_2_S41_L006_R1_001.fastq.gz, Day_60_P14_Ar… SRA
SRR9136904 5773907 715964468 349.49 Day_60_P14_Armstrong_Spleen_2_S43_L006_R1_001.fastq.gz, Day_60_P14_Ar… SRA
SRR9136905 6206316 769583184 370.53 Day_60_P14_Armstrong_Spleen_2_S41_L007_R1_001.fastq.gz, Day_60_P14_Ar… SRA
SRR9136906 5705273 707453852 343.91 Day_60_P14_Armstrong_Spleen_2_S43_L007_R1_001.fastq.gz, Day_60_P14_Ar… SRA
SRR9136907 6820601 845754524 410.33 Day_60_P14_Armstrong_Spleen_2_S42_L006_R1_001.fastq.gz, Day_60_P14_Ar… SRA
SRR9136908 7011644 869443856 420.28 Day_60_P14_Armstrong_Spleen_2_S44_L006_R1_001.fastq.gz, Day_60_P14_Ar… SRA
SRR9136909 6732507 834830868 403.08 Day_60_P14_Armstrong_Spleen_2_S42_L007_R1_001.fastq.gz, Day_60_P14_Ar… SRA
SRR9136910 6930765 859414860 413.2 Day_60_P14_Armstrong_Spleen_2_S44_L007_R1_001.fastq.gz, Day_60_P14_Ar… SRA
SRX5910226 SRP199655 RNA-Seq PAIRED
GSM3822201: D60_Gut_scRNA; Mus musculus; RNA-Seq
Sample: SRS4829117
BioProject: PRJNA545114
BioSample: SAMN11874387
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Mus musculus
Sample attributes
source_name: Gut CD8+ T cell
time point: D60
tissue: gut
cell type surface markers: CD45+ CD3+ CD8+
cell type: CD8 T cells
Original files (1)
Gut CD8+ T cell
Runs (8)
Run Spots Bases Size (MB) Files Link
SRR9136911 9180070 1138328680 544.46 Day_60_P14_Armstrong_IEL_S45_L006_R1_001.fastq.gz, Day_60_P14_Armstro… SRA
SRR9136912 7610226 943668024 451.03 Day_60_P14_Armstrong_IEL_S47_L006_R1_001.fastq.gz, Day_60_P14_Armstro… SRA
SRR9136913 9057450 1123123800 534.49 Day_60_P14_Armstrong_IEL_S45_L007_R1_001.fastq.gz, Day_60_P14_Armstro… SRA
SRR9136914 7504402 930545848 442.44 Day_60_P14_Armstrong_IEL_S47_L007_R1_001.fastq.gz, Day_60_P14_Armstro… SRA
SRR9136915 7511570 931434680 448.95 Day_60_P14_Armstrong_IEL_S46_L006_R1_001.fastq.gz, Day_60_P14_Armstro… SRA
SRR9136916 7754963 961615412 464.82 Day_60_P14_Armstrong_IEL_S48_L006_R1_001.fastq.gz, Day_60_P14_Armstro… SRA
SRR9136917 7395138 916997112 439.88 Day_60_P14_Armstrong_IEL_S46_L007_R1_001.fastq.gz, Day_60_P14_Armstro… SRA
SRR9136918 7658815 949693060 456.8 Day_60_P14_Armstrong_IEL_S48_L007_R1_001.fastq.gz, Day_60_P14_Armstro… SRA
SRX5910227 SRP199655 RNA-Seq PAIRED
GSM3822202: D90_Spleen_scRNA; Mus musculus; RNA-Seq
Sample: SRS4829118
BioProject: PRJNA545114
BioSample: SAMN11874386
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Mus musculus
Sample attributes
source_name: Spleen CD8+ T cell
time point: D90
tissue: spleen
cell type surface markers: CD45+ CD3+ CD8+
cell type: CD8 T cells
Original files (1)
Spleen CD8+ T cell
Runs (4)
Run Spots Bases Size (MB) Files Link
SRR9136919 14599683 1810360692 861.2 Mem_Tcirc_S13_L007_R1_001.fastq.gz, Mem_Tcirc_S13_L007_R2_001.fastq.g… SRA
SRR9136920 9579667 1187878708 566.31 Mem_Tcirc_S14_L007_R1_001.fastq.gz, Mem_Tcirc_S14_L007_R2_001.fastq.g… SRA
SRR9136921 23086588 2862736912 1369.34 Mem_Tcirc_S15_L007_R1_001.fastq.gz, Mem_Tcirc_S15_L007_R2_001.fastq.g… SRA
SRR9136922 12890133 1598376492 765.5 Mem_Tcirc_S16_L007_R1_001.fastq.gz, Mem_Tcirc_S16_L007_R2_001.fastq.g… SRA
SRX5910228 SRP199655 RNA-Seq PAIRED
GSM3822203: D90_Gut_scRNA; Mus musculus; RNA-Seq
Sample: SRS4829119
BioProject: PRJNA545114
BioSample: SAMN11874385
Platform: ILLUMINA
Instrument: Illumina HiSeq 4000
Organism: Mus musculus
Sample attributes
source_name: Gut CD8+ T cell
time point: D90
tissue: gut
cell type surface markers: CD45+ CD3+ CD8+
cell type: CD8 T cells
Original files (1)
Gut CD8+ T cell
Runs (4)
Run Spots Bases Size (MB) Files Link
SRR9136923 20147702 2498315048 1191.88 Mem_TRM_S17_L007_R1_001.fastq.gz, Mem_TRM_S17_L007_R2_001.fastq.gz, S… SRA
SRR9136924 22371140 2774021360 1322.57 Mem_TRM_S18_L007_R1_001.fastq.gz, Mem_TRM_S18_L007_R2_001.fastq.gz, S… SRA
SRR9136925 26652496 3304909504 1561.87 Mem_TRM_S19_L007_R1_001.fastq.gz, Mem_TRM_S19_L007_R2_001.fastq.gz, S… SRA
SRR9136926 12023699 1490938676 717.53 Mem_TRM_S20_L007_R1_001.fastq.gz, Mem_TRM_S20_L007_R2_001.fastq.gz, S… SRA

Linked Publications (2)

Heterogenous Populations of Tissue-Resident CD8<sup>+</sup> T Cells Are Generated in Response to Infection and Malignancy.
Immunity · 2020
Early precursors and molecular determinants of tissue-resident memory CD8<sup>+</sup> T lymphocytes revealed by single-cell RNA sequencing.
Science immunology · 2020

Data Files (472)

Accession File Name Stored Type Output Type Mapping Assembly Size Download
— 10X_100k_d5_S10_L008_R1_001.fastq.gz RNA-Seq 177.1 MB link
— 10X_100k_d5_S11_L008_R1_001.fastq.gz RNA-Seq 160.5 MB link
— 10X_100k_d5_S12_L008_R1_001.fastq.gz RNA-Seq 89.3 MB link
— 10X_100k_d5_S1_L001_R1_001.fastq.gz RNA-Seq 409.6 MB link
— 10X_100k_d5_S1_L002_R1_001.fastq.gz RNA-Seq 414.8 MB link
— 10X_100k_d5_S1_L003_R1_001.fastq.gz RNA-Seq 403.3 MB link
— 10X_100k_d5_S2_L001_R1_001.fastq.gz RNA-Seq 623.6 MB link
— 10X_100k_d5_S2_L002_R1_001.fastq.gz RNA-Seq 632.7 MB link
— 10X_100k_d5_S2_L003_R1_001.fastq.gz RNA-Seq 616.8 MB link
— 10X_100k_d5_S3_L001_R1_001.fastq.gz RNA-Seq 586.6 MB link
— 10X_100k_d5_S3_L002_R1_001.fastq.gz RNA-Seq 592.6 MB link
— 10X_100k_d5_S3_L003_R1_001.fastq.gz RNA-Seq 576.3 MB link
— 10X_100k_d5_S4_L001_R1_001.fastq.gz RNA-Seq 322.9 MB link
— 10X_100k_d5_S4_L002_R1_001.fastq.gz RNA-Seq 321.6 MB link
— 10X_100k_d5_S4_L003_R1_001.fastq.gz RNA-Seq 315.0 MB link
— 10X_100k_d5_S9_L008_R1_001.fastq.gz RNA-Seq 116.8 MB link
— 10X_100k_d6_S13_L008_R1_001.fastq.gz RNA-Seq 87.0 MB link
— 10X_100k_d6_S14_L008_R1_001.fastq.gz RNA-Seq 172.3 MB link
— 10X_100k_d6_S15_L008_R1_001.fastq.gz RNA-Seq 159.6 MB link
— 10X_100k_d6_S16_L008_R1_001.fastq.gz RNA-Seq 273.7 MB link
— 10X_100k_d6_S5_L001_R1_001.fastq.gz RNA-Seq 403.5 MB link
— 10X_100k_d6_S5_L002_R1_001.fastq.gz RNA-Seq 405.7 MB link
— 10X_100k_d6_S5_L003_R1_001.fastq.gz RNA-Seq 394.6 MB link
— 10X_100k_d6_S6_L001_R1_001.fastq.gz RNA-Seq 755.0 MB link
— 10X_100k_d6_S6_L002_R1_001.fastq.gz RNA-Seq 770.6 MB link
— 10X_100k_d6_S6_L003_R1_001.fastq.gz RNA-Seq 747.4 MB link
— 10X_100k_d6_S7_L001_R1_001.fastq.gz RNA-Seq 703.3 MB link
— 10X_100k_d6_S7_L002_R1_001.fastq.gz RNA-Seq 705.4 MB link
— 10X_100k_d6_S7_L003_R1_001.fastq.gz RNA-Seq 684.5 MB link
— 10X_100k_d6_S8_L001_R1_001.fastq.gz RNA-Seq 1.2 GB link
— 10X_100k_d6_S8_L002_R1_001.fastq.gz RNA-Seq 1.2 GB link
— 10X_100k_d6_S8_L003_R1_001.fastq.gz RNA-Seq 1.2 GB link
— 10X_100k_TRM_d7_S17_L001_R1_001.fastq.gz RNA-Seq 450.6 MB link
— 10X_100k_TRM_d7_S17_L002_R1_001.fastq.gz RNA-Seq 455.6 MB link
— 10X_100k_TRM_d7_S17_L003_R1_001.fastq.gz RNA-Seq 441.0 MB link
— 10X_100k_TRM_d7_S18_L001_R1_001.fastq.gz RNA-Seq 1.1 GB link
— 10X_100k_TRM_d7_S18_L002_R1_001.fastq.gz RNA-Seq 1.1 GB link
— 10X_100k_TRM_d7_S18_L003_R1_001.fastq.gz RNA-Seq 1.1 GB link
— 10X_100k_TRM_d7_S19_L001_R1_001.fastq.gz RNA-Seq 368.3 MB link
— 10X_100k_TRM_d7_S19_L002_R1_001.fastq.gz RNA-Seq 367.9 MB link
— 10X_100k_TRM_d7_S19_L003_R1_001.fastq.gz RNA-Seq 357.0 MB link
— 10X_100k_TRM_d7_S20_L001_R1_001.fastq.gz RNA-Seq 685.5 MB link
— 10X_100k_TRM_d7_S20_L002_R1_001.fastq.gz RNA-Seq 693.2 MB link
— 10X_100k_TRM_d7_S20_L003_R1_001.fastq.gz RNA-Seq 672.0 MB link
— 10X_100k_TRM_d7_S25_L008_R1_001.fastq.gz RNA-Seq 113.3 MB link
— 10X_100k_TRM_d7_S26_L008_R1_001.fastq.gz RNA-Seq 276.8 MB link
— 10X_100k_TRM_d7_S27_L008_R1_001.fastq.gz RNA-Seq 88.3 MB link
— 10X_100k_TRM_d7_S28_L008_R1_001.fastq.gz RNA-Seq 162.2 MB link
— 10X_2m_TRM_d4_S13_L001_R1_001.fastq.gz RNA-Seq 1.1 GB link
— 10X_2m_TRM_d4_S13_L002_R1_001.fastq.gz RNA-Seq 1.1 GB link
— 10X_2m_TRM_d4_S13_L003_R1_001.fastq.gz RNA-Seq 1.0 GB link
— 10X_2m_TRM_d4_S14_L001_R1_001.fastq.gz RNA-Seq 2.2 GB link
— 10X_2m_TRM_d4_S14_L002_R1_001.fastq.gz RNA-Seq 2.2 GB link
— 10X_2m_TRM_d4_S14_L003_R1_001.fastq.gz RNA-Seq 2.1 GB link
— 10X_2m_TRM_d4_S15_L001_R1_001.fastq.gz RNA-Seq 2.2 GB link
— 10X_2m_TRM_d4_S15_L002_R1_001.fastq.gz RNA-Seq 2.2 GB link
— 10X_2m_TRM_d4_S15_L003_R1_001.fastq.gz RNA-Seq 2.2 GB link
— 10X_2m_TRM_d4_S16_L001_R1_001.fastq.gz RNA-Seq 1.1 GB link
— 10X_2m_TRM_d4_S16_L002_R1_001.fastq.gz RNA-Seq 1.1 GB link
— 10X_2m_TRM_d4_S16_L003_R1_001.fastq.gz RNA-Seq 1.0 GB link
— 10X_2m_TRM_d4_S21_L008_R1_001.fastq.gz RNA-Seq 31.1 MB link
— 10X_2m_TRM_d4_S22_L008_R1_001.fastq.gz RNA-Seq 66.1 MB link
— 10X_2m_TRM_d4_S23_L008_R1_001.fastq.gz RNA-Seq 65.9 MB link
— 10X_2m_TRM_d4_S24_L008_R1_001.fastq.gz RNA-Seq 31.9 MB link
— 10X_d10_TRM_S13_L001_R1_001.fastq.gz RNA-Seq 194.6 KB link
— 10X_d10_TRM_S13_L002_R1_001.fastq.gz RNA-Seq 147.3 MB link
— 10X_d10_TRM_S13_L003_R1_001.fastq.gz RNA-Seq 119.0 MB link
— 10X_d10_TRM_S13_L004_R1_001.fastq.gz RNA-Seq 123.9 MB link
— 10X_d10_TRM_S14_L001_R1_001.fastq.gz RNA-Seq 174.1 KB link
— 10X_d10_TRM_S14_L002_R1_001.fastq.gz RNA-Seq 287.2 MB link
— 10X_d10_TRM_S14_L003_R1_001.fastq.gz RNA-Seq 229.0 MB link
— 10X_d10_TRM_S14_L004_R1_001.fastq.gz RNA-Seq 240.4 MB link
— 10X_d10_TRM_S15_L001_R1_001.fastq.gz RNA-Seq 174.1 KB link
— 10X_d10_TRM_S15_L002_R1_001.fastq.gz RNA-Seq 304.3 MB link
— 10X_d10_TRM_S15_L003_R1_001.fastq.gz RNA-Seq 242.2 MB link
— 10X_d10_TRM_S15_L004_R1_001.fastq.gz RNA-Seq 254.2 MB link
— 10X_d10_TRM_S16_L001_R1_001.fastq.gz RNA-Seq 184.3 KB link
— 10X_d10_TRM_S16_L002_R1_001.fastq.gz RNA-Seq 407.1 MB link
— 10X_d10_TRM_S16_L003_R1_001.fastq.gz RNA-Seq 323.1 MB link
— 10X_d10_TRM_S16_L004_R1_001.fastq.gz RNA-Seq 339.0 MB link
— 10X_d10_TRM_S21_L008_R1_001.fastq.gz RNA-Seq 242.0 MB link
— 10X_d10_TRM_S22_L008_R1_001.fastq.gz RNA-Seq 448.3 MB link
— 10X_d10_TRM_S23_L008_R1_001.fastq.gz RNA-Seq 490.5 MB link
— 10X_d10_TRM_S24_L008_R1_001.fastq.gz RNA-Seq 674.1 MB link
— 10X_d14_TRM_S17_L001_R1_001.fastq.gz RNA-Seq 133.1 KB link
— 10X_d14_TRM_S17_L002_R1_001.fastq.gz RNA-Seq 200.8 MB link
— 10X_d14_TRM_S17_L003_R1_001.fastq.gz RNA-Seq 160.1 MB link
— 10X_d14_TRM_S17_L004_R1_001.fastq.gz RNA-Seq 167.0 MB link
— 10X_d14_TRM_S18_L001_R1_001.fastq.gz RNA-Seq 143.4 KB link
— 10X_d14_TRM_S18_L002_R1_001.fastq.gz RNA-Seq 203.4 MB link
— 10X_d14_TRM_S18_L003_R1_001.fastq.gz RNA-Seq 162.2 MB link
— 10X_d14_TRM_S18_L004_R1_001.fastq.gz RNA-Seq 169.7 MB link
— 10X_d14_TRM_S19_L001_R1_001.fastq.gz RNA-Seq 286.7 KB link
— 10X_d14_TRM_S19_L002_R1_001.fastq.gz RNA-Seq 282.3 MB link
— 10X_d14_TRM_S19_L003_R1_001.fastq.gz RNA-Seq 227.4 MB link
— 10X_d14_TRM_S19_L004_R1_001.fastq.gz RNA-Seq 237.7 MB link
— 10X_d14_TRM_S20_L001_R1_001.fastq.gz RNA-Seq 143.4 KB link
— 10X_d14_TRM_S20_L002_R1_001.fastq.gz RNA-Seq 294.2 MB link
— 10X_d14_TRM_S20_L003_R1_001.fastq.gz RNA-Seq 233.5 MB link
— 10X_d14_TRM_S20_L004_R1_001.fastq.gz RNA-Seq 245.9 MB link
— 10X_d14_TRM_S25_L008_R1_001.fastq.gz RNA-Seq 452.2 MB link
— 10X_d14_TRM_S26_L008_R1_001.fastq.gz RNA-Seq 459.8 MB link
— 10X_d14_TRM_S27_L008_R1_001.fastq.gz RNA-Seq 631.1 MB link
— 10X_d14_TRM_S28_L008_R1_001.fastq.gz RNA-Seq 656.4 MB link
— 10X_d21_TRM_S21_L001_R1_001.fastq.gz RNA-Seq 542.7 KB link
— 10X_d21_TRM_S21_L002_R1_001.fastq.gz RNA-Seq 139.1 MB link
— 10X_d21_TRM_S21_L003_R1_001.fastq.gz RNA-Seq 112.4 MB link
— 10X_d21_TRM_S21_L004_R1_001.fastq.gz RNA-Seq 117.4 MB link
— 10X_d21_TRM_S22_L001_R1_001.fastq.gz RNA-Seq 133.1 KB link
— 10X_d21_TRM_S22_L002_R1_001.fastq.gz RNA-Seq 215.8 MB link
— 10X_d21_TRM_S22_L003_R1_001.fastq.gz RNA-Seq 170.6 MB link
— 10X_d21_TRM_S22_L004_R1_001.fastq.gz RNA-Seq 179.2 MB link
— 10X_d21_TRM_S23_L001_R1_001.fastq.gz RNA-Seq 163.8 KB link
— 10X_d21_TRM_S23_L002_R1_001.fastq.gz RNA-Seq 129.1 MB link
— 10X_d21_TRM_S23_L003_R1_001.fastq.gz RNA-Seq 103.8 MB link
— 10X_d21_TRM_S23_L004_R1_001.fastq.gz RNA-Seq 108.2 MB link
— 10X_d21_TRM_S24_L001_R1_001.fastq.gz RNA-Seq 133.1 KB link
— 10X_d21_TRM_S24_L002_R1_001.fastq.gz RNA-Seq 242.1 MB link
— 10X_d21_TRM_S24_L003_R1_001.fastq.gz RNA-Seq 192.3 MB link
— 10X_d21_TRM_S24_L004_R1_001.fastq.gz RNA-Seq 201.5 MB link
— 10X_d21_TRM_S29_L008_R1_001.fastq.gz RNA-Seq 373.1 MB link
— 10X_d21_TRM_S30_L008_R1_001.fastq.gz RNA-Seq 582.9 MB link
— 10X_d21_TRM_S31_L008_R1_001.fastq.gz RNA-Seq 362.3 MB link
— 10X_d21_TRM_S32_L008_R1_001.fastq.gz RNA-Seq 696.3 MB link
— 10X_d3_S25_L001_R1_001.fastq.gz RNA-Seq 286.7 KB link
— 10X_d3_S25_L002_R1_001.fastq.gz RNA-Seq 611.8 MB link
— 10X_d3_S25_L003_R1_001.fastq.gz RNA-Seq 490.7 MB link
— 10X_d3_S25_L004_R1_001.fastq.gz RNA-Seq 513.4 MB link
— 10X_d3_S26_L001_R1_001.fastq.gz RNA-Seq 317.4 KB link
— 10X_d3_S26_L002_R1_001.fastq.gz RNA-Seq 778.9 MB link
— 10X_d3_S26_L003_R1_001.fastq.gz RNA-Seq 625.7 MB link
— 10X_d3_S26_L004_R1_001.fastq.gz RNA-Seq 654.7 MB link
— 10X_d3_S27_L001_R1_001.fastq.gz RNA-Seq 501.8 KB link
— 10X_d3_S27_L002_R1_001.fastq.gz RNA-Seq 577.6 MB link
— 10X_d3_S27_L003_R1_001.fastq.gz RNA-Seq 470.8 MB link
— 10X_d3_S27_L004_R1_001.fastq.gz RNA-Seq 490.2 MB link
— 10X_d3_S28_L001_R1_001.fastq.gz RNA-Seq 266.2 KB link
— 10X_d3_S28_L002_R1_001.fastq.gz RNA-Seq 636.2 MB link
— 10X_d3_S28_L003_R1_001.fastq.gz RNA-Seq 509.8 MB link
— 10X_d3_S28_L004_R1_001.fastq.gz RNA-Seq 534.6 MB link
— 10X_d3_S33_L008_R1_001.fastq.gz RNA-Seq 448.6 MB link
— 10X_d3_S34_L008_R1_001.fastq.gz RNA-Seq 574.1 MB link
— 10X_d3_S35_L008_R1_001.fastq.gz RNA-Seq 421.3 MB link
— 10X_d3_S36_L008_R1_001.fastq.gz RNA-Seq 497.6 MB link
— 10X_d4_S29_L001_R1_001.fastq.gz RNA-Seq 553.0 KB link
— 10X_d4_S29_L002_R1_001.fastq.gz RNA-Seq 601.6 MB link
— 10X_d4_S29_L003_R1_001.fastq.gz RNA-Seq 494.1 MB link
— 10X_d4_S29_L004_R1_001.fastq.gz RNA-Seq 513.5 MB link
— 10X_d4_S30_L001_R1_001.fastq.gz RNA-Seq 675.8 KB link
— 10X_d4_S30_L002_R1_001.fastq.gz RNA-Seq 565.6 MB link
— 10X_d4_S30_L003_R1_001.fastq.gz RNA-Seq 460.4 MB link
— 10X_d4_S30_L004_R1_001.fastq.gz RNA-Seq 479.2 MB link
— 10X_d4_S31_L001_R1_001.fastq.gz RNA-Seq 256.0 KB link
— 10X_d4_S31_L002_R1_001.fastq.gz RNA-Seq 600.8 MB link
— 10X_d4_S31_L003_R1_001.fastq.gz RNA-Seq 482.7 MB link
— 10X_d4_S31_L004_R1_001.fastq.gz RNA-Seq 506.2 MB link
— 10X_d4_S32_L001_R1_001.fastq.gz RNA-Seq 317.4 KB link
— 10X_d4_S32_L002_R1_001.fastq.gz RNA-Seq 759.2 MB link
— 10X_d4_S32_L003_R1_001.fastq.gz RNA-Seq 611.4 MB link
— 10X_d4_S32_L004_R1_001.fastq.gz RNA-Seq 640.0 MB link
— 10X_d4_S37_L008_R1_001.fastq.gz RNA-Seq 501.0 MB link
— 10X_d4_S38_L008_R1_001.fastq.gz RNA-Seq 481.4 MB link
— 10X_d4_S39_L008_R1_001.fastq.gz RNA-Seq 524.7 MB link
— 10X_d4_S40_L008_R1_001.fastq.gz RNA-Seq 626.1 MB link
— 10X_naive_S21_L004_R1_001.fastq.gz RNA-Seq 651.6 MB link
— 10X_naive_S22_L004_R1_001.fastq.gz RNA-Seq 500.3 MB link
— 10X_naive_S23_L004_R1_001.fastq.gz RNA-Seq 557.0 MB link
— 10X_naive_S24_L004_R1_001.fastq.gz RNA-Seq 806.5 MB link
— d10_TRM_S13_L001_R1_001.fastq.gz RNA-Seq 295.8 MB link
— d10_TRM_S13_L002_R1_001.fastq.gz RNA-Seq 294.2 MB link
— d10_TRM_S14_L001_R1_001.fastq.gz RNA-Seq 593.1 MB link
— d10_TRM_S14_L002_R1_001.fastq.gz RNA-Seq 589.0 MB link
— d10_TRM_S15_L001_R1_001.fastq.gz RNA-Seq 661.5 MB link
— d10_TRM_S15_L002_R1_001.fastq.gz RNA-Seq 659.8 MB link
— d10_TRM_S16_L001_R1_001.fastq.gz RNA-Seq 845.2 MB link
— d10_TRM_S16_L002_R1_001.fastq.gz RNA-Seq 840.6 MB link
— d21_TRM_S21_L001_R1_001.fastq.gz RNA-Seq 253.5 MB link
— d21_TRM_S21_L002_R1_001.fastq.gz RNA-Seq 252.8 MB link
— d21_TRM_S22_L001_R1_001.fastq.gz RNA-Seq 422.7 MB link
— d21_TRM_S22_L002_R1_001.fastq.gz RNA-Seq 420.5 MB link
— d21_TRM_S23_L001_R1_001.fastq.gz RNA-Seq 242.4 MB link
— d21_TRM_S23_L002_R1_001.fastq.gz RNA-Seq 241.0 MB link
— d21_TRM_S24_L001_R1_001.fastq.gz RNA-Seq 451.2 MB link
— d21_TRM_S24_L002_R1_001.fastq.gz RNA-Seq 451.6 MB link
— d3_S25_L001_R1_001.fastq.gz RNA-Seq 1022.5 MB link
— d3_S25_L002_R1_001.fastq.gz RNA-Seq 1015.3 MB link
— d3_S26_L001_R1_001.fastq.gz RNA-Seq 1.3 GB link
— d3_S26_L002_R1_001.fastq.gz RNA-Seq 1.3 GB link
— d3_S27_L001_R1_001.fastq.gz RNA-Seq 947.4 MB link
— d3_S27_L002_R1_001.fastq.gz RNA-Seq 943.0 MB link
— d3_S28_L001_R1_001.fastq.gz RNA-Seq 1.1 GB link
— d3_S28_L002_R1_001.fastq.gz RNA-Seq 1.1 GB link
— d4_S29_L001_R1_001.fastq.gz RNA-Seq 785.7 MB link
— d4_S29_L002_R1_001.fastq.gz RNA-Seq 780.9 MB link
— d4_S30_L001_R1_001.fastq.gz RNA-Seq 749.5 MB link
— d4_S30_L002_R1_001.fastq.gz RNA-Seq 742.0 MB link
— d4_S31_L001_R1_001.fastq.gz RNA-Seq 825.2 MB link
— d4_S31_L002_R1_001.fastq.gz RNA-Seq 816.4 MB link
— d4_S32_L001_R1_001.fastq.gz RNA-Seq 1.0 GB link
— d4_S32_L002_R1_001.fastq.gz RNA-Seq 1.0 GB link
— d4_TRM_S25_L001_R1_001.fastq.gz RNA-Seq 29.7 MB link
— d4_TRM_S25_L002_R1_001.fastq.gz RNA-Seq 30.0 MB link
— d4_TRM_S25_L003_R1_001.fastq.gz RNA-Seq 29.7 MB link
— d4_TRM_S25_L004_R1_001.fastq.gz RNA-Seq 30.0 MB link
— d4_TRM_S25_L005_R1_001.fastq.gz RNA-Seq 30.0 MB link
— d4_TRM_S25_L006_R1_001.fastq.gz RNA-Seq 29.9 MB link
— d4_TRM_S25_L007_R1_001.fastq.gz RNA-Seq 29.4 MB link
— d4_TRM_S25_L008_R1_001.fastq.gz RNA-Seq 28.8 MB link
— d4_TRM_S26_L001_R1_001.fastq.gz RNA-Seq 63.8 MB link
— d4_TRM_S26_L002_R1_001.fastq.gz RNA-Seq 65.2 MB link
— d4_TRM_S26_L003_R1_001.fastq.gz RNA-Seq 64.4 MB link
— d4_TRM_S26_L004_R1_001.fastq.gz RNA-Seq 65.1 MB link
— d4_TRM_S26_L005_R1_001.fastq.gz RNA-Seq 65.1 MB link
— d4_TRM_S26_L006_R1_001.fastq.gz RNA-Seq 65.1 MB link
— d4_TRM_S26_L007_R1_001.fastq.gz RNA-Seq 64.2 MB link
— d4_TRM_S26_L008_R1_001.fastq.gz RNA-Seq 62.1 MB link
— d4_TRM_S27_L001_R1_001.fastq.gz RNA-Seq 61.8 MB link
— d4_TRM_S27_L002_R1_001.fastq.gz RNA-Seq 63.0 MB link
— d4_TRM_S27_L003_R1_001.fastq.gz RNA-Seq 62.8 MB link
— d4_TRM_S27_L004_R1_001.fastq.gz RNA-Seq 63.2 MB link
— d4_TRM_S27_L005_R1_001.fastq.gz RNA-Seq 63.4 MB link
— d4_TRM_S27_L006_R1_001.fastq.gz RNA-Seq 63.1 MB link
— d4_TRM_S27_L007_R1_001.fastq.gz RNA-Seq 62.5 MB link
— d4_TRM_S27_L008_R1_001.fastq.gz RNA-Seq 60.8 MB link
— d4_TRM_S28_L001_R1_001.fastq.gz RNA-Seq 34.2 MB link
— d4_TRM_S28_L002_R1_001.fastq.gz RNA-Seq 34.6 MB link
— d4_TRM_S28_L003_R1_001.fastq.gz RNA-Seq 34.3 MB link
— d4_TRM_S28_L004_R1_001.fastq.gz RNA-Seq 34.6 MB link
— d4_TRM_S28_L005_R1_001.fastq.gz RNA-Seq 34.5 MB link
— d4_TRM_S28_L006_R1_001.fastq.gz RNA-Seq 34.5 MB link
— d4_TRM_S28_L007_R1_001.fastq.gz RNA-Seq 33.9 MB link
— d4_TRM_S28_L008_R1_001.fastq.gz RNA-Seq 33.0 MB link
— d5_S29_L001_R1_001.fastq.gz RNA-Seq 402.6 MB link
— d5_S29_L002_R1_001.fastq.gz RNA-Seq 410.0 MB link
— d5_S29_L003_R1_001.fastq.gz RNA-Seq 405.0 MB link
— d5_S29_L004_R1_001.fastq.gz RNA-Seq 408.4 MB link
— d5_S29_L005_R1_001.fastq.gz RNA-Seq 407.5 MB link
— d5_S29_L006_R1_001.fastq.gz RNA-Seq 406.6 MB link
— d5_S29_L007_R1_001.fastq.gz RNA-Seq 400.5 MB link
— d5_S29_L008_R1_001.fastq.gz RNA-Seq 387.3 MB link
— d5_S30_L001_R1_001.fastq.gz RNA-Seq 598.5 MB link
— d5_S30_L002_R1_001.fastq.gz RNA-Seq 610.4 MB link
— d5_S30_L003_R1_001.fastq.gz RNA-Seq 601.6 MB link
— d5_S30_L004_R1_001.fastq.gz RNA-Seq 608.8 MB link
— d5_S30_L005_R1_001.fastq.gz RNA-Seq 607.7 MB link
— d5_S30_L006_R1_001.fastq.gz RNA-Seq 606.6 MB link
— d5_S30_L007_R1_001.fastq.gz RNA-Seq 599.4 MB link
— d5_S30_L008_R1_001.fastq.gz RNA-Seq 578.7 MB link
— d5_S31_L001_R1_001.fastq.gz RNA-Seq 541.7 MB link
— d5_S31_L002_R1_001.fastq.gz RNA-Seq 551.8 MB link
— d5_S31_L003_R1_001.fastq.gz RNA-Seq 548.1 MB link
— d5_S31_L004_R1_001.fastq.gz RNA-Seq 552.6 MB link
— d5_S31_L005_R1_001.fastq.gz RNA-Seq 552.6 MB link
— d5_S31_L006_R1_001.fastq.gz RNA-Seq 551.7 MB link
— d5_S31_L007_R1_001.fastq.gz RNA-Seq 543.9 MB link
— d5_S31_L008_R1_001.fastq.gz RNA-Seq 528.5 MB link
— d5_S32_L001_R1_001.fastq.gz RNA-Seq 295.8 MB link
— d5_S32_L002_R1_001.fastq.gz RNA-Seq 296.2 MB link
— d5_S32_L003_R1_001.fastq.gz RNA-Seq 291.5 MB link
— d5_S32_L004_R1_001.fastq.gz RNA-Seq 293.8 MB link
— d5_S32_L005_R1_001.fastq.gz RNA-Seq 292.9 MB link
— d5_S32_L006_R1_001.fastq.gz RNA-Seq 292.8 MB link
— d5_S32_L007_R1_001.fastq.gz RNA-Seq 289.8 MB link
— d5_S32_L008_R1_001.fastq.gz RNA-Seq 283.3 MB link
— d6_S33_L001_R1_001.fastq.gz RNA-Seq 94.8 MB link
— d6_S33_L002_R1_001.fastq.gz RNA-Seq 96.6 MB link
— d6_S33_L003_R1_001.fastq.gz RNA-Seq 96.1 MB link
— d6_S33_L004_R1_001.fastq.gz RNA-Seq 96.6 MB link
— d6_S33_L005_R1_001.fastq.gz RNA-Seq 96.6 MB link
— d6_S33_L006_R1_001.fastq.gz RNA-Seq 96.5 MB link
— d6_S33_L007_R1_001.fastq.gz RNA-Seq 95.3 MB link
— d6_S33_L008_R1_001.fastq.gz RNA-Seq 92.9 MB link
— d6_S34_L001_R1_001.fastq.gz RNA-Seq 185.4 MB link
— d6_S34_L002_R1_001.fastq.gz RNA-Seq 190.1 MB link
— d6_S34_L003_R1_001.fastq.gz RNA-Seq 187.9 MB link
— d6_S34_L004_R1_001.fastq.gz RNA-Seq 190.1 MB link
— d6_S34_L005_R1_001.fastq.gz RNA-Seq 190.0 MB link
— d6_S34_L006_R1_001.fastq.gz RNA-Seq 190.2 MB link
— d6_S34_L007_R1_001.fastq.gz RNA-Seq 187.7 MB link
— d6_S34_L008_R1_001.fastq.gz RNA-Seq 181.2 MB link
— d6_S35_L001_R1_001.fastq.gz RNA-Seq 164.2 MB link
— d6_S35_L002_R1_001.fastq.gz RNA-Seq 166.1 MB link
— d6_S35_L003_R1_001.fastq.gz RNA-Seq 165.3 MB link
— d6_S35_L004_R1_001.fastq.gz RNA-Seq 166.6 MB link
— d6_S35_L005_R1_001.fastq.gz RNA-Seq 166.5 MB link
— d6_S35_L006_R1_001.fastq.gz RNA-Seq 166.5 MB link
— d6_S35_L007_R1_001.fastq.gz RNA-Seq 164.4 MB link
— d6_S35_L008_R1_001.fastq.gz RNA-Seq 161.2 MB link
— d6_S36_L001_R1_001.fastq.gz RNA-Seq 280.4 MB link
— d6_S36_L002_R1_001.fastq.gz RNA-Seq 284.8 MB link
— d6_S36_L003_R1_001.fastq.gz RNA-Seq 283.8 MB link
— d6_S36_L004_R1_001.fastq.gz RNA-Seq 285.5 MB link
— d6_S36_L005_R1_001.fastq.gz RNA-Seq 286.9 MB link
— d6_S36_L006_R1_001.fastq.gz RNA-Seq 286.1 MB link
— d6_S36_L007_R1_001.fastq.gz RNA-Seq 282.9 MB link
— d6_S36_L008_R1_001.fastq.gz RNA-Seq 276.5 MB link
— D7_spleen_1_S5_L005_R1_001.fastq.gz RNA-Seq 816.5 MB link
— D7_spleen_1_S5_L008_R1_001.fastq.gz RNA-Seq 966.6 MB link
— D7_spleen_1_S6_L005_R1_001.fastq.gz RNA-Seq 645.0 MB link
— D7_spleen_1_S6_L008_R1_001.fastq.gz RNA-Seq 794.8 MB link
— D7_spleen_1_S7_L005_R1_001.fastq.gz RNA-Seq 498.2 MB link
— D7_spleen_1_S7_L008_R1_001.fastq.gz RNA-Seq 591.6 MB link
— D7_spleen_1_S8_L005_R1_001.fastq.gz RNA-Seq 565.8 MB link
— D7_spleen_1_S8_L008_R1_001.fastq.gz RNA-Seq 683.5 MB link
— D7_spleen_2_S10_L005_R1_001.fastq.gz RNA-Seq 774.6 MB link
— D7_spleen_2_S10_L008_R1_001.fastq.gz RNA-Seq 959.6 MB link
— D7_spleen_2_S11_L005_R1_001.fastq.gz RNA-Seq 654.3 MB link
— D7_spleen_2_S11_L008_R1_001.fastq.gz RNA-Seq 793.4 MB link
— D7_spleen_2_S12_L005_R1_001.fastq.gz RNA-Seq 784.9 MB link
— D7_spleen_2_S12_L008_R1_001.fastq.gz RNA-Seq 957.2 MB link
— D7_spleen_2_S9_L005_R1_001.fastq.gz RNA-Seq 674.2 MB link
— D7_spleen_2_S9_L008_R1_001.fastq.gz RNA-Seq 819.8 MB link
— d7_TRM_S41_L001_R1_001.fastq.gz RNA-Seq 64.0 MB link
— d7_TRM_S41_L002_R1_001.fastq.gz RNA-Seq 64.9 MB link
— d7_TRM_S41_L003_R1_001.fastq.gz RNA-Seq 64.3 MB link
— d7_TRM_S41_L004_R1_001.fastq.gz RNA-Seq 64.8 MB link
— d7_TRM_S41_L005_R1_001.fastq.gz RNA-Seq 64.7 MB link
— d7_TRM_S41_L006_R1_001.fastq.gz RNA-Seq 64.7 MB link
— d7_TRM_S41_L007_R1_001.fastq.gz RNA-Seq 63.7 MB link
— d7_TRM_S41_L008_R1_001.fastq.gz RNA-Seq 61.8 MB link
— d7_TRM_S42_L001_R1_001.fastq.gz RNA-Seq 141.7 MB link
— d7_TRM_S42_L002_R1_001.fastq.gz RNA-Seq 144.1 MB link
— d7_TRM_S42_L003_R1_001.fastq.gz RNA-Seq 143.3 MB link
— d7_TRM_S42_L004_R1_001.fastq.gz RNA-Seq 144.3 MB link
— d7_TRM_S42_L005_R1_001.fastq.gz RNA-Seq 144.7 MB link
— d7_TRM_S42_L006_R1_001.fastq.gz RNA-Seq 144.3 MB link
— d7_TRM_S42_L007_R1_001.fastq.gz RNA-Seq 142.6 MB link
— d7_TRM_S42_L008_R1_001.fastq.gz RNA-Seq 138.9 MB link
— d7_TRM_S43_L001_R1_001.fastq.gz RNA-Seq 48.0 MB link
— d7_TRM_S43_L002_R1_001.fastq.gz RNA-Seq 48.6 MB link
— d7_TRM_S43_L003_R1_001.fastq.gz RNA-Seq 48.2 MB link
— d7_TRM_S43_L004_R1_001.fastq.gz RNA-Seq 48.5 MB link
— d7_TRM_S43_L005_R1_001.fastq.gz RNA-Seq 48.4 MB link
— d7_TRM_S43_L006_R1_001.fastq.gz RNA-Seq 48.3 MB link
— d7_TRM_S43_L007_R1_001.fastq.gz RNA-Seq 47.7 MB link
— d7_TRM_S43_L008_R1_001.fastq.gz RNA-Seq 46.9 MB link
— d7_TRM_S44_L001_R1_001.fastq.gz RNA-Seq 88.3 MB link
— d7_TRM_S44_L002_R1_001.fastq.gz RNA-Seq 89.6 MB link
— d7_TRM_S44_L003_R1_001.fastq.gz RNA-Seq 88.5 MB link
— d7_TRM_S44_L004_R1_001.fastq.gz RNA-Seq 89.1 MB link
— d7_TRM_S44_L005_R1_001.fastq.gz RNA-Seq 89.2 MB link
— d7_TRM_S44_L006_R1_001.fastq.gz RNA-Seq 89.3 MB link
— d7_TRM_S44_L007_R1_001.fastq.gz RNA-Seq 88.3 MB link
— d7_TRM_S44_L008_R1_001.fastq.gz RNA-Seq 86.1 MB link
— Day_10_P14_Armstrong_Spleen_1_S1_L006_R1_001.fastq.gz RNA-Seq 419.6 MB link
— Day_10_P14_Armstrong_Spleen_1_S1_L007_R1_001.fastq.gz RNA-Seq 411.6 MB link
— Day_10_P14_Armstrong_Spleen_1_S2_L006_R1_001.fastq.gz RNA-Seq 290.9 MB link
— Day_10_P14_Armstrong_Spleen_1_S2_L007_R1_001.fastq.gz RNA-Seq 286.5 MB link
— Day_10_P14_Armstrong_Spleen_1_S3_L006_R1_001.fastq.gz RNA-Seq 550.8 MB link
— Day_10_P14_Armstrong_Spleen_1_S3_L007_R1_001.fastq.gz RNA-Seq 538.5 MB link
— Day_10_P14_Armstrong_Spleen_1_S4_L006_R1_001.fastq.gz RNA-Seq 427.3 MB link
— Day_10_P14_Armstrong_Spleen_1_S4_L007_R1_001.fastq.gz RNA-Seq 419.1 MB link
— Day_10_P14_Armstrong_Spleen_2_S5_L006_R1_001.fastq.gz RNA-Seq 330.4 MB link
— Day_10_P14_Armstrong_Spleen_2_S5_L007_R1_001.fastq.gz RNA-Seq 325.2 MB link
— Day_10_P14_Armstrong_Spleen_2_S6_L006_R1_001.fastq.gz RNA-Seq 520.5 MB link
— Day_10_P14_Armstrong_Spleen_2_S6_L007_R1_001.fastq.gz RNA-Seq 511.1 MB link
— Day_10_P14_Armstrong_Spleen_2_S7_L006_R1_001.fastq.gz RNA-Seq 532.0 MB link
— Day_10_P14_Armstrong_Spleen_2_S7_L007_R1_001.fastq.gz RNA-Seq 523.3 MB link
— Day_10_P14_Armstrong_Spleen_2_S8_L006_R1_001.fastq.gz RNA-Seq 346.5 MB link
— Day_10_P14_Armstrong_Spleen_2_S8_L007_R1_001.fastq.gz RNA-Seq 340.1 MB link
— Day_14_P14_Armstrong_Spleen_1_S10_L006_R1_001.fastq.gz RNA-Seq 328.2 MB link
— Day_14_P14_Armstrong_Spleen_1_S10_L007_R1_001.fastq.gz RNA-Seq 322.0 MB link
— Day_14_P14_Armstrong_Spleen_1_S11_L006_R1_001.fastq.gz RNA-Seq 209.7 MB link
— Day_14_P14_Armstrong_Spleen_1_S11_L007_R1_001.fastq.gz RNA-Seq 206.5 MB link
— Day_14_P14_Armstrong_Spleen_1_S12_L006_R1_001.fastq.gz RNA-Seq 570.5 MB link
— Day_14_P14_Armstrong_Spleen_1_S12_L007_R1_001.fastq.gz RNA-Seq 559.4 MB link
— Day_14_P14_Armstrong_Spleen_1_S9_L006_R1_001.fastq.gz RNA-Seq 560.4 MB link
— Day_14_P14_Armstrong_Spleen_1_S9_L007_R1_001.fastq.gz RNA-Seq 550.1 MB link
— Day_14_P14_Armstrong_Spleen_2_S13_L006_R1_001.fastq.gz RNA-Seq 411.9 MB link
— Day_14_P14_Armstrong_Spleen_2_S13_L007_R1_001.fastq.gz RNA-Seq 403.4 MB link
— Day_14_P14_Armstrong_Spleen_2_S14_L006_R1_001.fastq.gz RNA-Seq 272.3 MB link
— Day_14_P14_Armstrong_Spleen_2_S14_L007_R1_001.fastq.gz RNA-Seq 267.1 MB link
— Day_14_P14_Armstrong_Spleen_2_S15_L006_R1_001.fastq.gz RNA-Seq 354.7 MB link
— Day_14_P14_Armstrong_Spleen_2_S15_L007_R1_001.fastq.gz RNA-Seq 347.4 MB link
— Day_14_P14_Armstrong_Spleen_2_S16_L006_R1_001.fastq.gz RNA-Seq 312.6 MB link
— Day_14_P14_Armstrong_Spleen_2_S16_L007_R1_001.fastq.gz RNA-Seq 306.5 MB link
— Day_21_P14_Armstrong_Spleen_1_S17_L006_R1_001.fastq.gz RNA-Seq 648.1 MB link
— Day_21_P14_Armstrong_Spleen_1_S17_L007_R1_001.fastq.gz RNA-Seq 635.0 MB link
— Day_21_P14_Armstrong_Spleen_1_S18_L006_R1_001.fastq.gz RNA-Seq 266.5 MB link
— Day_21_P14_Armstrong_Spleen_1_S18_L007_R1_001.fastq.gz RNA-Seq 261.9 MB link
— Day_21_P14_Armstrong_Spleen_1_S19_L006_R1_001.fastq.gz RNA-Seq 430.1 MB link
— Day_21_P14_Armstrong_Spleen_1_S19_L007_R1_001.fastq.gz RNA-Seq 422.3 MB link
— Day_21_P14_Armstrong_Spleen_1_S20_L006_R1_001.fastq.gz RNA-Seq 420.4 MB link
— Day_21_P14_Armstrong_Spleen_1_S20_L007_R1_001.fastq.gz RNA-Seq 413.2 MB link
— Day_21_P14_Armstrong_Spleen_2_S21_L006_R1_001.fastq.gz RNA-Seq 537.4 MB link
— Day_21_P14_Armstrong_Spleen_2_S21_L007_R1_001.fastq.gz RNA-Seq 529.2 MB link
— Day_21_P14_Armstrong_Spleen_2_S22_L006_R1_001.fastq.gz RNA-Seq 314.8 MB link
— Day_21_P14_Armstrong_Spleen_2_S22_L007_R1_001.fastq.gz RNA-Seq 308.9 MB link
— Day_21_P14_Armstrong_Spleen_2_S23_L006_R1_001.fastq.gz RNA-Seq 597.6 MB link
— Day_21_P14_Armstrong_Spleen_2_S23_L007_R1_001.fastq.gz RNA-Seq 586.0 MB link
— Day_21_P14_Armstrong_Spleen_2_S24_L006_R1_001.fastq.gz RNA-Seq 467.0 MB link
— Day_21_P14_Armstrong_Spleen_2_S24_L007_R1_001.fastq.gz RNA-Seq 458.9 MB link
— Day_32_P14_Armstrong_IEL_1_S33_L006_R1_001.fastq.gz RNA-Seq 375.9 MB link
— Day_32_P14_Armstrong_IEL_1_S33_L007_R1_001.fastq.gz RNA-Seq 368.2 MB link
— Day_32_P14_Armstrong_IEL_1_S34_L006_R1_001.fastq.gz RNA-Seq 255.1 MB link
— Day_32_P14_Armstrong_IEL_1_S34_L007_R1_001.fastq.gz RNA-Seq 250.8 MB link
— Day_32_P14_Armstrong_IEL_1_S35_L006_R1_001.fastq.gz RNA-Seq 353.5 MB link
— Day_32_P14_Armstrong_IEL_1_S35_L007_R1_001.fastq.gz RNA-Seq 347.2 MB link
— Day_32_P14_Armstrong_IEL_1_S36_L006_R1_001.fastq.gz RNA-Seq 465.7 MB link
— Day_32_P14_Armstrong_IEL_1_S36_L007_R1_001.fastq.gz RNA-Seq 457.0 MB link
— Day_32_P14_Armstrong_IEL_3_S37_L006_R1_001.fastq.gz RNA-Seq 428.0 MB link
— Day_32_P14_Armstrong_IEL_3_S37_L007_R1_001.fastq.gz RNA-Seq 418.6 MB link
— Day_32_P14_Armstrong_IEL_3_S38_L006_R1_001.fastq.gz RNA-Seq 407.2 MB link
— Day_32_P14_Armstrong_IEL_3_S38_L007_R1_001.fastq.gz RNA-Seq 400.0 MB link
— Day_32_P14_Armstrong_IEL_3_S39_L006_R1_001.fastq.gz RNA-Seq 393.5 MB link
— Day_32_P14_Armstrong_IEL_3_S39_L007_R1_001.fastq.gz RNA-Seq 385.8 MB link
— Day_32_P14_Armstrong_IEL_3_S40_L006_R1_001.fastq.gz RNA-Seq 301.3 MB link
— Day_32_P14_Armstrong_IEL_3_S40_L007_R1_001.fastq.gz RNA-Seq 295.3 MB link
— Day_32_P14_Armstrong_Spleen_1_S25_L006_R1_001.fastq.gz RNA-Seq 272.9 MB link
— Day_32_P14_Armstrong_Spleen_1_S25_L007_R1_001.fastq.gz RNA-Seq 268.1 MB link
— Day_32_P14_Armstrong_Spleen_1_S26_L006_R1_001.fastq.gz RNA-Seq 386.0 MB link
— Day_32_P14_Armstrong_Spleen_1_S26_L007_R1_001.fastq.gz RNA-Seq 379.2 MB link
— Day_32_P14_Armstrong_Spleen_1_S27_L006_R1_001.fastq.gz RNA-Seq 586.6 MB link
— Day_32_P14_Armstrong_Spleen_1_S27_L007_R1_001.fastq.gz RNA-Seq 576.9 MB link
— Day_32_P14_Armstrong_Spleen_1_S28_L006_R1_001.fastq.gz RNA-Seq 518.8 MB link
— Day_32_P14_Armstrong_Spleen_1_S28_L007_R1_001.fastq.gz RNA-Seq 509.6 MB link
— Day_60_P14_Armstrong_IEL_S45_L006_R1_001.fastq.gz RNA-Seq 544.5 MB link
— Day_60_P14_Armstrong_IEL_S45_L007_R1_001.fastq.gz RNA-Seq 534.5 MB link
— Day_60_P14_Armstrong_IEL_S46_L006_R1_001.fastq.gz RNA-Seq 448.9 MB link
— Day_60_P14_Armstrong_IEL_S46_L007_R1_001.fastq.gz RNA-Seq 439.9 MB link
— Day_60_P14_Armstrong_IEL_S47_L006_R1_001.fastq.gz RNA-Seq 451.0 MB link
— Day_60_P14_Armstrong_IEL_S47_L007_R1_001.fastq.gz RNA-Seq 442.4 MB link
— Day_60_P14_Armstrong_IEL_S48_L006_R1_001.fastq.gz RNA-Seq 464.8 MB link
— Day_60_P14_Armstrong_IEL_S48_L007_R1_001.fastq.gz RNA-Seq 456.8 MB link
— Day_60_P14_Armstrong_Spleen_2_S41_L006_R1_001.fastq.gz RNA-Seq 377.3 MB link
— Day_60_P14_Armstrong_Spleen_2_S41_L007_R1_001.fastq.gz RNA-Seq 370.5 MB link
— Day_60_P14_Armstrong_Spleen_2_S42_L006_R1_001.fastq.gz RNA-Seq 410.3 MB link
— Day_60_P14_Armstrong_Spleen_2_S42_L007_R1_001.fastq.gz RNA-Seq 403.1 MB link
— Day_60_P14_Armstrong_Spleen_2_S43_L006_R1_001.fastq.gz RNA-Seq 349.5 MB link
— Day_60_P14_Armstrong_Spleen_2_S43_L007_R1_001.fastq.gz RNA-Seq 343.9 MB link
— Day_60_P14_Armstrong_Spleen_2_S44_L006_R1_001.fastq.gz RNA-Seq 420.3 MB link
— Day_60_P14_Armstrong_Spleen_2_S44_L007_R1_001.fastq.gz RNA-Seq 413.2 MB link
— Mem_Tcirc_S13_L007_R1_001.fastq.gz RNA-Seq 861.2 MB link
— Mem_Tcirc_S14_L007_R1_001.fastq.gz RNA-Seq 566.3 MB link
— Mem_Tcirc_S15_L007_R1_001.fastq.gz RNA-Seq 1.3 GB link
— Mem_Tcirc_S16_L007_R1_001.fastq.gz RNA-Seq 765.5 MB link
— Mem_TRM_S17_L007_R1_001.fastq.gz RNA-Seq 1.2 GB link
— Mem_TRM_S18_L007_R1_001.fastq.gz RNA-Seq 1.3 GB link
— Mem_TRM_S19_L007_R1_001.fastq.gz RNA-Seq 1.5 GB link
— Mem_TRM_S20_L007_R1_001.fastq.gz RNA-Seq 717.5 MB link
— naive_S1_L001_R1_001.fastq.gz RNA-Seq 131.0 MB link
— naive_S1_L002_R1_001.fastq.gz RNA-Seq 133.9 MB link
— naive_S1_L003_R1_001.fastq.gz RNA-Seq 132.4 MB link
— naive_S1_L004_R1_001.fastq.gz RNA-Seq 134.1 MB link
— naive_S1_L005_R1_001.fastq.gz RNA-Seq 133.7 MB link
— naive_S1_L006_R1_001.fastq.gz RNA-Seq 133.6 MB link
— naive_S1_L007_R1_001.fastq.gz RNA-Seq 131.6 MB link
— naive_S1_L008_R1_001.fastq.gz RNA-Seq 127.7 MB link
— naive_S2_L001_R1_001.fastq.gz RNA-Seq 93.6 MB link
— naive_S2_L002_R1_001.fastq.gz RNA-Seq 95.1 MB link
— naive_S2_L003_R1_001.fastq.gz RNA-Seq 94.5 MB link
— naive_S2_L004_R1_001.fastq.gz RNA-Seq 94.9 MB link
— naive_S2_L005_R1_001.fastq.gz RNA-Seq 95.2 MB link
— naive_S2_L006_R1_001.fastq.gz RNA-Seq 94.9 MB link
— naive_S2_L007_R1_001.fastq.gz RNA-Seq 93.7 MB link
— naive_S2_L008_R1_001.fastq.gz RNA-Seq 91.8 MB link
— naive_S3_L001_R1_001.fastq.gz RNA-Seq 109.9 MB link
— naive_S3_L002_R1_001.fastq.gz RNA-Seq 112.3 MB link
— naive_S3_L003_R1_001.fastq.gz RNA-Seq 111.2 MB link
— naive_S3_L004_R1_001.fastq.gz RNA-Seq 112.4 MB link
— naive_S3_L005_R1_001.fastq.gz RNA-Seq 112.3 MB link
— naive_S3_L006_R1_001.fastq.gz RNA-Seq 112.1 MB link
— naive_S3_L007_R1_001.fastq.gz RNA-Seq 110.8 MB link
— naive_S3_L008_R1_001.fastq.gz RNA-Seq 107.5 MB link
— naive_S4_L001_R1_001.fastq.gz RNA-Seq 152.2 MB link
— naive_S4_L002_R1_001.fastq.gz RNA-Seq 155.2 MB link
— naive_S4_L003_R1_001.fastq.gz RNA-Seq 154.6 MB link
— naive_S4_L004_R1_001.fastq.gz RNA-Seq 155.6 MB link
— naive_S4_L005_R1_001.fastq.gz RNA-Seq 155.7 MB link
— naive_S4_L006_R1_001.fastq.gz RNA-Seq 155.4 MB link
— naive_S4_L007_R1_001.fastq.gz RNA-Seq 153.5 MB link
— naive_S4_L008_R1_001.fastq.gz RNA-Seq 149.5 MB link