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GSE86464

GSE GEO
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HNRNPA2B1 regulates alternative RNA processing in the nervous system and accumulates in granules in ALS IPSC-derived motor neurons

Organism: Mus musculus
Platform: GPL13112
Samples: 124
Experiment Types:
Expression profiling by array Expression profiling by high throughput sequencing Other Non-coding RNA profiling by high throughput sequencing
Submitted: Sep 06 2016
Last Updated: May 15 2019
Status: Public on Oct 20 2016
Contact: Gene,,Yeo (UCSD)

Relations

SuperSeries of: GSE86038 SuperSeries of: GSE86040 SuperSeries of: GSE86041 SuperSeries of: GSE86043 SuperSeries of: GSE86218 SuperSeries of: GSE86223 SuperSeries of: GSE86224 SuperSeries of: GSE86227 SuperSeries of: GSE86462 BioProject: https://www.ncbi.nlm.nih.gov/bioproject/PRJNA341985

Summary

This SuperSeries is composed of the SubSeries listed below.

Overall Design

Refer to individual Series

Analysis (3 steps)

View Data Processing
Processing steps for GSE86464
  1. Data processed using Affymetrix package (Affy Power Tools) apt-probeset-summarize.
  2. Iter-plier algorithm used to quantify probesets.
  3. http://exon.ucsc.edu/documentation/mjay_library/hjay.pgf

Supplementary Files (1)

GSE86464_RAW.tar Download
GEO Samples (124)
GSM2292109 GSM2292110 GSM2292111 GSM2292112 GSM2292113 GSM2292114 GSM2292115 GSM2292116 GSM2292117 GSM2292118 GSM2292119 GSM2292120 GSM2292121 GSM2292122 GSM2292123 GSM2292508 GSM2292509 GSM2292510 GSM2292511 GSM2292512 GSM2292513 GSM2292514 GSM2292515 GSM2292516 GSM2292517 GSM2292518 GSM2292519 GSM2292520 GSM2292521 GSM2292522 GSM2292523 GSM2292524 GSM2292525 GSM2292526 GSM2292527 GSM2292528 GSM2292529 GSM2298369 GSM2298370 GSM2298371 GSM2298372 GSM2298373 GSM2298414 GSM2298415 GSM2298416 GSM2298417 GSM2298418 GSM2298419 GSM2298420 GSM2298421 GSM2298422 GSM2298423 GSM2298424 GSM2298425 GSM2298426 GSM2298427 GSM2298428 GSM2298429 GSM2298430 GSM2298431 GSM2298432 GSM2298433 GSM2298434 GSM2298435 GSM2298436 GSM2298437 GSM2298438 GSM2298439 GSM2298440 GSM2298441 GSM2298799 GSM2298800 GSM2298801 GSM2298802 GSM2298803 GSM2298804 GSM2298805 GSM2298806 GSM2298807 GSM2298808 GSM2298809 GSM2298810 GSM2303046 GSM2303047 GSM2303048 GSM2303049 GSM2303050 GSM2303051 GSM2303052 GSM2303053 GSM2303054 GSM2303055 GSM2303056 GSM2303057 GSM2303058 GSM2303059 GSM2303060 GSM2303061 GSM2303062 GSM2303063 GSM2303064 GSM2303065 GSM2303066 GSM2303067 GSM2303068 GSM2303069 GSM2303070 GSM2303071 GSM2303072 GSM2303073 GSM2303074 GSM2303075 GSM2303076 GSM2303077 GSM2303078 GSM2303079 GSM2303080 GSM2303081 GSM2303082 GSM2303083 GSM2303084 GSM2303085 GSM2303086 GSM2303087

Dataset Citations (1)

Protein-RNA Networks Regulated by Normal and ALS-Associated Mutant HNRNPA2B1 in the Nervous System.
PMID 27773581 · 2016 · Neuron
Fernando J Martinez, Gabriel A Pratt, Eric L Van Nostrand, Ranjan Batra, Stephanie C Huelga, Katannya Kapeli, Peter Freese, Seung J Chun, Karen Ling, Chelsea Gelboin-Burkhart, Layla Fijany, Harrison C Wang, Julia K Nussbacher, Sara M Broski, Hong Joo Kim, Rea Lardelli, Balaji Sundararaman, John P Donohue, Ashkan Javaherian, Jens Lykke-Andersen, Steven Finkbeiner, C Frank Bennett, Manuel Ares, Christopher B Burge, J Paul Taylor, Frank Rigo, Gene W Yeo

Linked Publications (1)

Protein-RNA Networks Regulated by Normal and ALS-Associated Mutant HNRNPA2B1 in the Nervous System.
Neuron · 2016