#!/usr/bin/env bash
# Bulk download script for GSE232515
# Generated from Yeo Lab Publications Database
# Total files: 75

OUTDIR="GSE232515"
mkdir -p "$OUTDIR"
cd "$OUTDIR"

# --- GEO supplementary files ---
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE232nnn/GSE232515/suppl/GSE232515_ai_APOBEC1_only.tsv.gz" -O "GSE232515_ai_APOBEC1_only.tsv.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE232nnn/GSE232515/suppl/GSE232515_ai_RBFOX2-APOBEC1.tsv.gz" -O "GSE232515_ai_RBFOX2-APOBEC1.tsv.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE232nnn/GSE232515/suppl/GSE232515_ai_RBFOX2-FOX2-APOBEC1_cleaned.tsv.gz" -O "GSE232515_ai_RBFOX2-FOX2-APOBEC1_cleaned.tsv.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE232nnn/GSE232515/suppl/GSE232515_ai_RBFOX2-RESCUE_ADAR2dd.tsv.gz" -O "GSE232515_ai_RBFOX2-RESCUE_ADAR2dd.tsv.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE232nnn/GSE232515/suppl/GSE232515_ai_RBFOX2-RESCUE_ADAR2dd_cleaned.tsv.gz" -O "GSE232515_ai_RBFOX2-RESCUE_ADAR2dd_cleaned.tsv.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE232nnn/GSE232515/suppl/GSE232515_ai_RBFOX2-TadA-7.10_V82G_.tsv.gz" -O "GSE232515_ai_RBFOX2-TadA-7.10_V82G_.tsv.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE232nnn/GSE232515/suppl/GSE232515_ai_RBFOX2-TadA-7.10_V82G_cleaned.tsv.gz" -O "GSE232515_ai_RBFOX2-TadA-7.10_V82G_cleaned.tsv.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE232nnn/GSE232515/suppl/GSE232515_ai_RBFOX2-TadA-8e.tsv.gz" -O "GSE232515_ai_RBFOX2-TadA-8e.tsv.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE232nnn/GSE232515/suppl/GSE232515_ai_RBFOX2-TadA-8e_cleaned.tsv.gz" -O "GSE232515_ai_RBFOX2-TadA-8e_cleaned.tsv.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE232nnn/GSE232515/suppl/GSE232515_ai_RBFOX2-TadA-8e_only.tsv.gz" -O "GSE232515_ai_RBFOX2-TadA-8e_only.tsv.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE232nnn/GSE232515/suppl/GSE232515_ai_RESCUE_ADAR2dd_only.tsv.gz" -O "GSE232515_ai_RESCUE_ADAR2dd_only.tsv.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE232nnn/GSE232515/suppl/GSE232515_ai_TadA-7.10_V82G_alone.tsv.gz" -O "GSE232515_ai_TadA-7.10_V82G_alone.tsv.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE232nnn/GSE232515/suppl/GSE232515_both_ai_and_cu_RBFOX2-RESCUE_ADAR2dd.tsv.gz" -O "GSE232515_both_ai_and_cu_RBFOX2-RESCUE_ADAR2dd.tsv.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE232nnn/GSE232515/suppl/GSE232515_both_ai_and_cu_RBFOX2-RESCUE_ADAR2dd_cleaned.tsv.gz" -O "GSE232515_both_ai_and_cu_RBFOX2-RESCUE_ADAR2dd_cleaned.tsv.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE232nnn/GSE232515/suppl/GSE232515_both_ai_and_cu_RESCUE_ADAR2dd_alone.tsv.gz" -O "GSE232515_both_ai_and_cu_RESCUE_ADAR2dd_alone.tsv.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE232nnn/GSE232515/suppl/GSE232515_cu_APOBEC1_only.tsv.gz" -O "GSE232515_cu_APOBEC1_only.tsv.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE232nnn/GSE232515/suppl/GSE232515_cu_FOX2-TadA-8e_cleaned.tsv.gz" -O "GSE232515_cu_FOX2-TadA-8e_cleaned.tsv.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE232nnn/GSE232515/suppl/GSE232515_cu_RBFOX2-APOBEC1.tsv.gz" -O "GSE232515_cu_RBFOX2-APOBEC1.tsv.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE232nnn/GSE232515/suppl/GSE232515_cu_RBFOX2-APOBEC1_cleaned.tsv.gz" -O "GSE232515_cu_RBFOX2-APOBEC1_cleaned.tsv.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE232nnn/GSE232515/suppl/GSE232515_cu_RBFOX2-RESCUE_ADAR2dd.tsv.gz" -O "GSE232515_cu_RBFOX2-RESCUE_ADAR2dd.tsv.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE232nnn/GSE232515/suppl/GSE232515_cu_RBFOX2-RESCUE_ADAR2dd_cleaned.tsv.gz" -O "GSE232515_cu_RBFOX2-RESCUE_ADAR2dd_cleaned.tsv.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE232nnn/GSE232515/suppl/GSE232515_cu_RBFOX2-TadA-7.10_V82G_.tsv.gz" -O "GSE232515_cu_RBFOX2-TadA-7.10_V82G_.tsv.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE232nnn/GSE232515/suppl/GSE232515_cu_RBFOX2-TadA-7.10_V82G_cleaned.tsv.gz" -O "GSE232515_cu_RBFOX2-TadA-7.10_V82G_cleaned.tsv.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE232nnn/GSE232515/suppl/GSE232515_cu_RBFOX2-TadA-8e.tsv.gz" -O "GSE232515_cu_RBFOX2-TadA-8e.tsv.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE232nnn/GSE232515/suppl/GSE232515_cu_RESCUE_ADAR2dd_only.tsv.gz" -O "GSE232515_cu_RESCUE_ADAR2dd_only.tsv.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE232nnn/GSE232515/suppl/GSE232515_cu_TadA-7.10_V82G_only.tsv.gz" -O "GSE232515_cu_TadA-7.10_V82G_only.tsv.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE232nnn/GSE232515/suppl/GSE232515_cu_TadA-8e_alone.tsv.gz" -O "GSE232515_cu_TadA-8e_alone.tsv.gz"

# --- SRA run files ---
# Tip: use 'fasterq-dump' from SRA Toolkit for FASTQ conversion
#      with optional renaming to original submitted FASTQ names.
# Set to 1 to rename SRR outputs (e.g. SRR_1.fastq.gz -> sample_R1.fastq.gz)
RENAME_SRA_TO_ORIGINAL=1

_compress_if_exists() {
  local stem="$1"
  if [ -f "${stem}.fastq" ]; then
    gzip -f "${stem}.fastq"
    echo "${stem}.fastq.gz"
    return 0
  fi
  if [ -f "${stem}.fq" ]; then
    gzip -f "${stem}.fq"
    echo "${stem}.fq.gz"
    return 0
  fi
  return 1
}

# Option A: Download via SRA Toolkit (recommended)
fasterq-dump --split-files "SRR24557344"
gz1="$(_compress_if_exists 'SRR24557344_1' || true)"
gz2="$(_compress_if_exists 'SRR24557344_2' || true)"
gzs="$(_compress_if_exists 'SRR24557344' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "Hugo-F2_S34_L002_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR24557345"
gz1="$(_compress_if_exists 'SRR24557345_1' || true)"
gz2="$(_compress_if_exists 'SRR24557345_2' || true)"
gzs="$(_compress_if_exists 'SRR24557345' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "Hugo-F1_S84_L002_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR24557346"
gz1="$(_compress_if_exists 'SRR24557346_1' || true)"
gz2="$(_compress_if_exists 'SRR24557346_2' || true)"
gzs="$(_compress_if_exists 'SRR24557346' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "Hugo-E8_S83_L002_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR24557347"
gz1="$(_compress_if_exists 'SRR24557347_1' || true)"
gz2="$(_compress_if_exists 'SRR24557347_2' || true)"
gzs="$(_compress_if_exists 'SRR24557347' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "Hugo-E7_S33_L002_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR24557348"
gz1="$(_compress_if_exists 'SRR24557348_1' || true)"
gz2="$(_compress_if_exists 'SRR24557348_2' || true)"
gzs="$(_compress_if_exists 'SRR24557348' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "Hugo-E6_S82_L002_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR24557349"
gz1="$(_compress_if_exists 'SRR24557349_1' || true)"
gz2="$(_compress_if_exists 'SRR24557349_2' || true)"
gzs="$(_compress_if_exists 'SRR24557349' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "Hugo-E5_S81_L002_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR24557350"
gz1="$(_compress_if_exists 'SRR24557350_1' || true)"
gz2="$(_compress_if_exists 'SRR24557350_2' || true)"
gzs="$(_compress_if_exists 'SRR24557350' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "Hugo-E4_S32_L002_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR24557351"
gz1="$(_compress_if_exists 'SRR24557351_1' || true)"
gz2="$(_compress_if_exists 'SRR24557351_2' || true)"
gzs="$(_compress_if_exists 'SRR24557351' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "Hugo-E3_S80_L002_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR24557352"
gz1="$(_compress_if_exists 'SRR24557352_1' || true)"
gz2="$(_compress_if_exists 'SRR24557352_2' || true)"
gzs="$(_compress_if_exists 'SRR24557352' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "Hugo-E2_S79_L002_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR24557353"
gz1="$(_compress_if_exists 'SRR24557353_1' || true)"
gz2="$(_compress_if_exists 'SRR24557353_2' || true)"
gzs="$(_compress_if_exists 'SRR24557353' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "Hugo-E1_S31_L002_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR24557354"
gz1="$(_compress_if_exists 'SRR24557354_1' || true)"
gz2="$(_compress_if_exists 'SRR24557354_2' || true)"
gzs="$(_compress_if_exists 'SRR24557354' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "Hugo-D8_S78_L002_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR24557355"
gz1="$(_compress_if_exists 'SRR24557355_1' || true)"
gz2="$(_compress_if_exists 'SRR24557355_2' || true)"
gzs="$(_compress_if_exists 'SRR24557355' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "Hugo-D7_S77_L002_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR24557356"
gz1="$(_compress_if_exists 'SRR24557356_1' || true)"
gz2="$(_compress_if_exists 'SRR24557356_2' || true)"
gzs="$(_compress_if_exists 'SRR24557356' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "Hugo-B7_S15_L001_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR24557357"
gz1="$(_compress_if_exists 'SRR24557357_1' || true)"
gz2="$(_compress_if_exists 'SRR24557357_2' || true)"
gzs="$(_compress_if_exists 'SRR24557357' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "Hugo-B6_S10_L001_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR24557358"
gz1="$(_compress_if_exists 'SRR24557358_1' || true)"
gz2="$(_compress_if_exists 'SRR24557358_2' || true)"
gzs="$(_compress_if_exists 'SRR24557358' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "Hugo-B5_S9_L001_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR24557359"
gz1="$(_compress_if_exists 'SRR24557359_1' || true)"
gz2="$(_compress_if_exists 'SRR24557359_2' || true)"
gzs="$(_compress_if_exists 'SRR24557359' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "Hugo-B4_S14_L001_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR24557360"
gz1="$(_compress_if_exists 'SRR24557360_1' || true)"
gz2="$(_compress_if_exists 'SRR24557360_2' || true)"
gzs="$(_compress_if_exists 'SRR24557360' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "Hugo-B3_S8_L001_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR24557361"
gz1="$(_compress_if_exists 'SRR24557361_1' || true)"
gz2="$(_compress_if_exists 'SRR24557361_2' || true)"
gzs="$(_compress_if_exists 'SRR24557361' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "Hugo-B2_S7_L001_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR24557362"
gz1="$(_compress_if_exists 'SRR24557362_1' || true)"
gz2="$(_compress_if_exists 'SRR24557362_2' || true)"
gzs="$(_compress_if_exists 'SRR24557362' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "Hugo-D6_S30_L002_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR24557363"
gz1="$(_compress_if_exists 'SRR24557363_1' || true)"
gz2="$(_compress_if_exists 'SRR24557363_2' || true)"
gzs="$(_compress_if_exists 'SRR24557363' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "Hugo-D5_S76_L002_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR24557364"
gz1="$(_compress_if_exists 'SRR24557364_1' || true)"
gz2="$(_compress_if_exists 'SRR24557364_2' || true)"
gzs="$(_compress_if_exists 'SRR24557364' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "Hugo-D4_S75_L002_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR24557365"
gz1="$(_compress_if_exists 'SRR24557365_1' || true)"
gz2="$(_compress_if_exists 'SRR24557365_2' || true)"
gzs="$(_compress_if_exists 'SRR24557365' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "Hugo-A3_S11_L001_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR24557366"
gz1="$(_compress_if_exists 'SRR24557366_1' || true)"
gz2="$(_compress_if_exists 'SRR24557366_2' || true)"
gzs="$(_compress_if_exists 'SRR24557366' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "Hugo-A2_S2_L001_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR24557367"
gz1="$(_compress_if_exists 'SRR24557367_1' || true)"
gz2="$(_compress_if_exists 'SRR24557367_2' || true)"
gzs="$(_compress_if_exists 'SRR24557367' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "Hugo-A1_S1_L001_R1_001.fastq.gz"
fi


# Option B: Direct download (larger .sra files)
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557344/SRR24557344"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557345/SRR24557345"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557346/SRR24557346"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557347/SRR24557347"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557348/SRR24557348"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557349/SRR24557349"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557350/SRR24557350"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557351/SRR24557351"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557352/SRR24557352"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557353/SRR24557353"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557354/SRR24557354"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557355/SRR24557355"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557356/SRR24557356"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557357/SRR24557357"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557358/SRR24557358"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557359/SRR24557359"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557360/SRR24557360"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557361/SRR24557361"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557362/SRR24557362"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557363/SRR24557363"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557364/SRR24557364"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557365/SRR24557365"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557366/SRR24557366"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557367/SRR24557367"

# --- Additional data files ---
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557367/SRR24557367"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557366/SRR24557366"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557365/SRR24557365"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557361/SRR24557361"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557360/SRR24557360"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557359/SRR24557359"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557358/SRR24557358"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557357/SRR24557357"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557356/SRR24557356"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557364/SRR24557364"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557363/SRR24557363"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557362/SRR24557362"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557355/SRR24557355"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557354/SRR24557354"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557353/SRR24557353"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557352/SRR24557352"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557351/SRR24557351"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557350/SRR24557350"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557349/SRR24557349"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557348/SRR24557348"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557347/SRR24557347"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557346/SRR24557346"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557345/SRR24557345"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR24557344/SRR24557344"

echo "Download complete. Files saved to $OUTDIR"