GSE19138
GSE GEOComprehensive discovery of endogenous Argonaute binding sites in C. elegans
Organism:
6239
Platform:
GPL200
Samples:
6
Experiment Types:
Expression profiling by array
Submitted:
Nov 23 2009
Last Updated:
Jul 06 2016
Status:
Public on Nov 24 2009
Contact:
Gene,,Yeo (UCSD)
Relations
BioProject: https://www.ncbi.nlm.nih.gov/bioproject/PRJNA120681
Summary
Comprehensive discovery of endogenous Argonaute binding sites in C. elegans
Overall Design
Total RNA were extracted from whole alg-1(gk214) (alg-1(-)) and N2 (wildtype) worms and used to compare the expression profiles of genes that were targeted by ALG-1 protein.
Analysis (1 step)
View Data Processing
Processing steps for GSE19138
- C. elegans GeneChip arrays were analyzed by using affymetrix power tools (command line arguments apt-probeset-summarize -a rma-sketch -a plier-mm-sketch -d Celegans.CDF)
Supplementary Files (1)
GSE19138_RAW.tar
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Dataset Citations (1)
Comprehensive discovery of endogenous Argonaute binding sites in Caenorhabditis elegans.
PMID 20062054
· 2010
· Nature structural & molecular biology
Dimitrios G Zisoulis, Michael T Lovci, Melissa L Wilbert, Kasey R Hutt, Tiffany Y Liang, Amy E Pasquinelli, Gene W Yeo
Linked Publications (1)
Comprehensive discovery of endogenous Argonaute binding sites in Caenorhabditis elegans.
Nature structural & molecular biology · 2010
Potentially Related Publications (1)
This accession was text-mined from the PMC full text of these publications. It may be referenced for comparison or reused from another study rather than generated for them.
Comprehensive discovery of endogenous Argonaute binding sites in Caenorhabditis elegans.
Nature structural & molecular biology · 2010