GSE220462
GSE GEOEpistatic interactions between NMD and TRP53 control progenitor cell maintenance and brain size
Organism:
Mus musculus
Platform:
GPL21103
Samples:
34
Experiment Types:
Expression profiling by high throughput sequencing
Submitted:
Dec 07 2022
Last Updated:
May 31 2024
Status:
Public on May 30 2024
Contact:
Sika,,Zheng (University of California, Riverside)
Relations
SuperSeries of: GSE220459
SuperSeries of: GSE220460
SuperSeries of: GSE220461
SuperSeries of: GSE253825
BioProject: https://www.ncbi.nlm.nih.gov/bioproject/PRJNA909801
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall Design
Refer to individual Series
Analysis (2 steps)
View Data Processing
Processing steps for GSE220462
- The raw data was mapped using STAR.
- We calculated the gene-level read counts and identified differentially expressed genes by in-house script.
Supplementary Files (1)
GSE220462_RAW.tar
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GEO Samples (34)
GSM6805152
GSM6805153
GSM6805154
GSM6805155
GSM6805156
GSM6805157
GSM6805158
GSM6805159
GSM6805160
GSM6805161
GSM6805162
GSM6805163
GSM6805164
GSM6805165
GSM6805166
GSM6805167
GSM6805168
GSM6805169
GSM6805170
GSM6805171
GSM6805172
GSM6805173
GSM6805174
GSM6805175
GSM6805176
GSM6805177
GSM6805178
GSM6805179
GSM6805180
GSM6805181
GSM6805182
GSM6805183
GSM8028390
GSM8028391
Dataset Citations (1)
Epistatic interactions between NMD and TRP53 control progenitor cell maintenance and brain size.
PMID 38697111
· 2024
· Neuron
Lin Lin, Jingrong Zhao, Naoto Kubota, Zhelin Li, Yi-Li Lam, Lauren P Nguyen, Lu Yang, Sheela P Pokharel, Steven M Blue, Brian A Yee, Renee Chen, Gene W Yeo, Chun-Wei Chen, Liang Chen, Sika Zheng