#!/usr/bin/env bash
# Bulk download script for GSE203090
# Generated from Yeo Lab Publications Database
# Total files: 84

OUTDIR="GSE203090"
mkdir -p "$OUTDIR"
cd "$OUTDIR"

# --- GEO supplementary files ---
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE203nnn/GSE203090/suppl/GSE203090_H3K27me3.Malat1.fc.signal.bigwig" -O "GSE203090_H3K27me3.Malat1.fc.signal.bigwig"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE203nnn/GSE203090/suppl/GSE203090_H3K27me3.NT.fc.signal.bigwig" -O "GSE203090_H3K27me3.NT.fc.signal.bigwig"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE203nnn/GSE203090/suppl/GSE203090_H3K4me3.Malat1.fc.signal.bigwig" -O "GSE203090_H3K4me3.Malat1.fc.signal.bigwig"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE203nnn/GSE203090/suppl/GSE203090_H3K4me3.NT.fc.signal.bigwig" -O "GSE203090_H3K4me3.NT.fc.signal.bigwig"

# --- SRA run files ---
# Tip: use 'fasterq-dump' from SRA Toolkit for FASTQ conversion
#      with optional renaming to original submitted FASTQ names.
# Set to 1 to rename SRR outputs (e.g. SRR_1.fastq.gz -> sample_R1.fastq.gz)
RENAME_SRA_TO_ORIGINAL=1

_compress_if_exists() {
  local stem="$1"
  if [ -f "${stem}.fastq" ]; then
    gzip -f "${stem}.fastq"
    echo "${stem}.fastq.gz"
    return 0
  fi
  if [ -f "${stem}.fq" ]; then
    gzip -f "${stem}.fq"
    echo "${stem}.fq.gz"
    return 0
  fi
  return 1
}

# Option A: Download via SRA Toolkit (recommended)
fasterq-dump --split-files "SRR19217989"
gz1="$(_compress_if_exists 'SRR19217989_1' || true)"
gz2="$(_compress_if_exists 'SRR19217989_2' || true)"
gzs="$(_compress_if_exists 'SRR19217989' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "NT_12_Input_S22_L006_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19217990"
gz1="$(_compress_if_exists 'SRR19217990_1' || true)"
gz2="$(_compress_if_exists 'SRR19217990_2' || true)"
gzs="$(_compress_if_exists 'SRR19217990' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "NT_12_Input_S22_L005_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19217991"
gz1="$(_compress_if_exists 'SRR19217991_1' || true)"
gz2="$(_compress_if_exists 'SRR19217991_2' || true)"
gzs="$(_compress_if_exists 'SRR19217991' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "NT_12_Input_S14_L008_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19217992"
gz1="$(_compress_if_exists 'SRR19217992_1' || true)"
gz2="$(_compress_if_exists 'SRR19217992_2' || true)"
gzs="$(_compress_if_exists 'SRR19217992' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "NT_12_Input_S14_L007_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19217993"
gz1="$(_compress_if_exists 'SRR19217993_1' || true)"
gz2="$(_compress_if_exists 'SRR19217993_2' || true)"
gzs="$(_compress_if_exists 'SRR19217993' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "MALAT1_A12_Input_S21_L006_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19217994"
gz1="$(_compress_if_exists 'SRR19217994_1' || true)"
gz2="$(_compress_if_exists 'SRR19217994_2' || true)"
gzs="$(_compress_if_exists 'SRR19217994' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "MALAT1_A12_Input_S21_L005_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19217995"
gz1="$(_compress_if_exists 'SRR19217995_1' || true)"
gz2="$(_compress_if_exists 'SRR19217995_2' || true)"
gzs="$(_compress_if_exists 'SRR19217995' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "MALAT1_A12_Input_S13_L008_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19217996"
gz1="$(_compress_if_exists 'SRR19217996_1' || true)"
gz2="$(_compress_if_exists 'SRR19217996_2' || true)"
gzs="$(_compress_if_exists 'SRR19217996' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "MALAT1_A12_Input_S13_L007_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19217997"
gz1="$(_compress_if_exists 'SRR19217997_1' || true)"
gz2="$(_compress_if_exists 'SRR19217997_2' || true)"
gzs="$(_compress_if_exists 'SRR19217997' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "NT_2_H3K4me3_S18_L006_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19217998"
gz1="$(_compress_if_exists 'SRR19217998_1' || true)"
gz2="$(_compress_if_exists 'SRR19217998_2' || true)"
gzs="$(_compress_if_exists 'SRR19217998' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "NT_2_H3K4me3_S18_L005_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19217999"
gz1="$(_compress_if_exists 'SRR19217999_1' || true)"
gz2="$(_compress_if_exists 'SRR19217999_2' || true)"
gzs="$(_compress_if_exists 'SRR19217999' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "NT_2_H3K4me3_S12_L008_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19218000"
gz1="$(_compress_if_exists 'SRR19218000_1' || true)"
gz2="$(_compress_if_exists 'SRR19218000_2' || true)"
gzs="$(_compress_if_exists 'SRR19218000' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "NT_2_H3K4me3_S12_L007_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19218001"
gz1="$(_compress_if_exists 'SRR19218001_1' || true)"
gz2="$(_compress_if_exists 'SRR19218001_2' || true)"
gzs="$(_compress_if_exists 'SRR19218001' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "NT_1_H3K4me3_S16_L006_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19218002"
gz1="$(_compress_if_exists 'SRR19218002_1' || true)"
gz2="$(_compress_if_exists 'SRR19218002_2' || true)"
gzs="$(_compress_if_exists 'SRR19218002' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "NT_1_H3K4me3_S16_L005_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19218003"
gz1="$(_compress_if_exists 'SRR19218003_1' || true)"
gz2="$(_compress_if_exists 'SRR19218003_2' || true)"
gzs="$(_compress_if_exists 'SRR19218003' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "NT_1_H3K4me3_S10_L008_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19218004"
gz1="$(_compress_if_exists 'SRR19218004_1' || true)"
gz2="$(_compress_if_exists 'SRR19218004_2' || true)"
gzs="$(_compress_if_exists 'SRR19218004' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "NT_1_H3K4me3_S10_L007_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19218005"
gz1="$(_compress_if_exists 'SRR19218005_1' || true)"
gz2="$(_compress_if_exists 'SRR19218005_2' || true)"
gzs="$(_compress_if_exists 'SRR19218005' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "MALAT1_A2_H3K4me3_S9_L008_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19218006"
gz1="$(_compress_if_exists 'SRR19218006_1' || true)"
gz2="$(_compress_if_exists 'SRR19218006_2' || true)"
gzs="$(_compress_if_exists 'SRR19218006' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "MALAT1_A2_H3K4me3_S9_L007_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19218007"
gz1="$(_compress_if_exists 'SRR19218007_1' || true)"
gz2="$(_compress_if_exists 'SRR19218007_2' || true)"
gzs="$(_compress_if_exists 'SRR19218007' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "MALAT1_A2_H3K4me3_S13_L006_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19218008"
gz1="$(_compress_if_exists 'SRR19218008_1' || true)"
gz2="$(_compress_if_exists 'SRR19218008_2' || true)"
gzs="$(_compress_if_exists 'SRR19218008' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "MALAT1_A2_H3K4me3_S13_L005_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19218009"
gz1="$(_compress_if_exists 'SRR19218009_1' || true)"
gz2="$(_compress_if_exists 'SRR19218009_2' || true)"
gzs="$(_compress_if_exists 'SRR19218009' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "MALAT1_A1_H3K4me3_S7_L008_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19218010"
gz1="$(_compress_if_exists 'SRR19218010_1' || true)"
gz2="$(_compress_if_exists 'SRR19218010_2' || true)"
gzs="$(_compress_if_exists 'SRR19218010' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "MALAT1_A1_H3K4me3_S7_L007_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19218011"
gz1="$(_compress_if_exists 'SRR19218011_1' || true)"
gz2="$(_compress_if_exists 'SRR19218011_2' || true)"
gzs="$(_compress_if_exists 'SRR19218011' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "MALAT1_A1_H3K4me3_S11_L006_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19218012"
gz1="$(_compress_if_exists 'SRR19218012_1' || true)"
gz2="$(_compress_if_exists 'SRR19218012_2' || true)"
gzs="$(_compress_if_exists 'SRR19218012' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "MALAT1_A1_H3K4me3_S11_L005_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19218013"
gz1="$(_compress_if_exists 'SRR19218013_1' || true)"
gz2="$(_compress_if_exists 'SRR19218013_2' || true)"
gzs="$(_compress_if_exists 'SRR19218013' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "NT_2_H3K27me3_S5_L007_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19218014"
gz1="$(_compress_if_exists 'SRR19218014_1' || true)"
gz2="$(_compress_if_exists 'SRR19218014_2' || true)"
gzs="$(_compress_if_exists 'SRR19218014' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "NT_2_H3K27me3_S5_L008_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19218015"
gz1="$(_compress_if_exists 'SRR19218015_1' || true)"
gz2="$(_compress_if_exists 'SRR19218015_2' || true)"
gzs="$(_compress_if_exists 'SRR19218015' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "NT_2_H3K27me3_S7_L005_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19218016"
gz1="$(_compress_if_exists 'SRR19218016_1' || true)"
gz2="$(_compress_if_exists 'SRR19218016_2' || true)"
gzs="$(_compress_if_exists 'SRR19218016' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "NT_2_H3K27me3_S7_L006_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19218017"
gz1="$(_compress_if_exists 'SRR19218017_1' || true)"
gz2="$(_compress_if_exists 'SRR19218017_2' || true)"
gzs="$(_compress_if_exists 'SRR19218017' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "NT_1_H3K27me3_S4_L007_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19218018"
gz1="$(_compress_if_exists 'SRR19218018_1' || true)"
gz2="$(_compress_if_exists 'SRR19218018_2' || true)"
gzs="$(_compress_if_exists 'SRR19218018' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "NT_1_H3K27me3_S4_L008_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19218019"
gz1="$(_compress_if_exists 'SRR19218019_1' || true)"
gz2="$(_compress_if_exists 'SRR19218019_2' || true)"
gzs="$(_compress_if_exists 'SRR19218019' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "NT_1_H3K27me3_S6_L005_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19218020"
gz1="$(_compress_if_exists 'SRR19218020_1' || true)"
gz2="$(_compress_if_exists 'SRR19218020_2' || true)"
gzs="$(_compress_if_exists 'SRR19218020' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "NT_1_H3K27me3_S6_L006_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19218021"
gz1="$(_compress_if_exists 'SRR19218021_1' || true)"
gz2="$(_compress_if_exists 'SRR19218021_2' || true)"
gzs="$(_compress_if_exists 'SRR19218021' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "MALAT1_A2_H3K27me3_S2_L005_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19218022"
gz1="$(_compress_if_exists 'SRR19218022_1' || true)"
gz2="$(_compress_if_exists 'SRR19218022_2' || true)"
gzs="$(_compress_if_exists 'SRR19218022' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "MALAT1_A2_H3K27me3_S2_L006_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19218023"
gz1="$(_compress_if_exists 'SRR19218023_1' || true)"
gz2="$(_compress_if_exists 'SRR19218023_2' || true)"
gzs="$(_compress_if_exists 'SRR19218023' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "MALAT1_A2_H3K27me3_S2_L007_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19218024"
gz1="$(_compress_if_exists 'SRR19218024_1' || true)"
gz2="$(_compress_if_exists 'SRR19218024_2' || true)"
gzs="$(_compress_if_exists 'SRR19218024' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "MALAT1_A2_H3K27me3_S2_L008_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19218025"
gz1="$(_compress_if_exists 'SRR19218025_1' || true)"
gz2="$(_compress_if_exists 'SRR19218025_2' || true)"
gzs="$(_compress_if_exists 'SRR19218025' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "MALAT1_A1_H3K27me3_S1_L005_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19218026"
gz1="$(_compress_if_exists 'SRR19218026_1' || true)"
gz2="$(_compress_if_exists 'SRR19218026_2' || true)"
gzs="$(_compress_if_exists 'SRR19218026' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "MALAT1_A1_H3K27me3_S1_L006_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19218027"
gz1="$(_compress_if_exists 'SRR19218027_1' || true)"
gz2="$(_compress_if_exists 'SRR19218027_2' || true)"
gzs="$(_compress_if_exists 'SRR19218027' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "MALAT1_A1_H3K27me3_S1_L007_R1_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19218028"
gz1="$(_compress_if_exists 'SRR19218028_1' || true)"
gz2="$(_compress_if_exists 'SRR19218028_2' || true)"
gzs="$(_compress_if_exists 'SRR19218028' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "MALAT1_A1_H3K27me3_S1_L008_R1_001.fastq.gz"
fi


# Option B: Direct download (larger .sra files)
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19217989/SRR19217989"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19217990/SRR19217990"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19217991/SRR19217991"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19217992/SRR19217992"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19217993/SRR19217993"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19217994/SRR19217994"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19217995/SRR19217995"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19217996/SRR19217996"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19217997/SRR19217997"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19217998/SRR19217998"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19217999/SRR19217999"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218000/SRR19218000"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218001/SRR19218001"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218002/SRR19218002"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218003/SRR19218003"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218004/SRR19218004"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218005/SRR19218005"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218006/SRR19218006"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218007/SRR19218007"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218008/SRR19218008"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218009/SRR19218009"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218010/SRR19218010"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218011/SRR19218011"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218012/SRR19218012"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218013/SRR19218013"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218014/SRR19218014"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218015/SRR19218015"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218016/SRR19218016"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218017/SRR19218017"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218018/SRR19218018"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218019/SRR19218019"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218020/SRR19218020"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218021/SRR19218021"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218022/SRR19218022"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218023/SRR19218023"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218024/SRR19218024"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218025/SRR19218025"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218026/SRR19218026"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218027/SRR19218027"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218028/SRR19218028"

# --- Additional data files ---
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19217996/SRR19217996"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19217995/SRR19217995"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19217994/SRR19217994"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19217993/SRR19217993"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218025/SRR19218025"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218026/SRR19218026"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218027/SRR19218027"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218028/SRR19218028"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218012/SRR19218012"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218011/SRR19218011"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218010/SRR19218010"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218009/SRR19218009"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218021/SRR19218021"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218022/SRR19218022"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218023/SRR19218023"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218024/SRR19218024"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218008/SRR19218008"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218007/SRR19218007"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218006/SRR19218006"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218005/SRR19218005"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19217992/SRR19217992"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19217991/SRR19217991"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19217990/SRR19217990"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19217989/SRR19217989"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218017/SRR19218017"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218018/SRR19218018"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218019/SRR19218019"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218020/SRR19218020"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218004/SRR19218004"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218003/SRR19218003"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218002/SRR19218002"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218001/SRR19218001"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218013/SRR19218013"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218014/SRR19218014"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218015/SRR19218015"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218016/SRR19218016"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19218000/SRR19218000"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19217999/SRR19217999"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19217998/SRR19217998"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19217997/SRR19217997"

echo "Download complete. Files saved to $OUTDIR"