#!/usr/bin/env bash
# Bulk download script for GSE202051
# Generated from Yeo Lab Publications Database
# Total files: 151

OUTDIR="GSE202051"
mkdir -p "$OUTDIR"
cd "$OUTDIR"

# --- GEO supplementary files ---
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE202nnn/GSE202051/suppl/GSE202051_adata_010nuc_10x.h5ad.gz" -O "GSE202051_adata_010nuc_10x.h5ad.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE202nnn/GSE202051/suppl/GSE202051_adata_010orgCRT_10x.h5ad.gz" -O "GSE202051_adata_010orgCRT_10x.h5ad.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE202nnn/GSE202051/suppl/GSE202051_totaldata-final-toshare.h5ad.gz" -O "GSE202051_totaldata-final-toshare.h5ad.gz"

# --- SRA run files ---
# Tip: use 'fasterq-dump' from SRA Toolkit for FASTQ conversion
#      with optional renaming to original submitted FASTQ names.
# Set to 1 to rename SRR outputs (e.g. SRR_1.fastq.gz -> sample_R1.fastq.gz)
RENAME_SRA_TO_ORIGINAL=1

_compress_if_exists() {
  local stem="$1"
  if [ -f "${stem}.fastq" ]; then
    gzip -f "${stem}.fastq"
    echo "${stem}.fastq.gz"
    return 0
  fi
  if [ -f "${stem}.fq" ]; then
    gzip -f "${stem}.fq"
    echo "${stem}.fq.gz"
    return 0
  fi
  return 1
}

# Option A: Download via SRA Toolkit (recommended)
fasterq-dump --split-files "SRR19039304"
gz1="$(_compress_if_exists 'SRR19039304_1' || true)"
gz2="$(_compress_if_exists 'SRR19039304_2' || true)"
gzs="$(_compress_if_exists 'SRR19039304' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_25_treated-NSTnPo-PDAC_channel1_S3_L001_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_25_treated-NSTnPo-PDAC_channel1_S3_L001_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039305"
gz1="$(_compress_if_exists 'SRR19039305_1' || true)"
gz2="$(_compress_if_exists 'SRR19039305_2' || true)"
gzs="$(_compress_if_exists 'SRR19039305' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_24v2_MGHR8v2_channel1_S1_L001_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_24v2_MGHR8v2_channel1_S1_L001_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039306"
gz1="$(_compress_if_exists 'SRR19039306_1' || true)"
gz2="$(_compress_if_exists 'SRR19039306_2' || true)"
gzs="$(_compress_if_exists 'SRR19039306' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_U_2_untreated-NSTnPo-PDAC_channel1_S6_L002_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_U_2_untreated-NSTnPo-PDAC_channel1_S6_L002_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039307"
gz1="$(_compress_if_exists 'SRR19039307_1' || true)"
gz2="$(_compress_if_exists 'SRR19039307_2' || true)"
gzs="$(_compress_if_exists 'SRR19039307' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_24_MGHR8_channel1_S17_L005_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_24_MGHR8_channel1_S17_L005_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039308"
gz1="$(_compress_if_exists 'SRR19039308_1' || true)"
gz2="$(_compress_if_exists 'SRR19039308_2' || true)"
gzs="$(_compress_if_exists 'SRR19039308' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_23_treated-NSTnPo-PDAC_channel1_S5_L005_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_23_treated-NSTnPo-PDAC_channel1_S5_L005_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039309"
gz1="$(_compress_if_exists 'SRR19039309_1' || true)"
gz2="$(_compress_if_exists 'SRR19039309_2' || true)"
gzs="$(_compress_if_exists 'SRR19039309' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_22_treated-NSTnPo-PDAC_channel1_S3_L006_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_22_treated-NSTnPo-PDAC_channel1_S3_L006_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039310"
gz1="$(_compress_if_exists 'SRR19039310_1' || true)"
gz2="$(_compress_if_exists 'SRR19039310_2' || true)"
gzs="$(_compress_if_exists 'SRR19039310' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_21v2_MGHR9v2_channel1_S5_L004_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_21v2_MGHR9v2_channel1_S5_L004_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039311"
gz1="$(_compress_if_exists 'SRR19039311_1' || true)"
gz2="$(_compress_if_exists 'SRR19039311_2' || true)"
gzs="$(_compress_if_exists 'SRR19039311' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_21_MGHR9_channel1_S10_L003_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_21_MGHR9_channel1_S10_L003_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039312"
gz1="$(_compress_if_exists 'SRR19039312_1' || true)"
gz2="$(_compress_if_exists 'SRR19039312_2' || true)"
gzs="$(_compress_if_exists 'SRR19039312' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_20_treated-NSTnPo-PDAC_channel1_S6_L005_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_20_treated-NSTnPo-PDAC_channel1_S6_L005_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039313"
gz1="$(_compress_if_exists 'SRR19039313_1' || true)"
gz2="$(_compress_if_exists 'SRR19039313_2' || true)"
gzs="$(_compress_if_exists 'SRR19039313' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_19v2_MGH2381v2_channel1_S18_L007_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_19v2_MGH2381v2_channel1_S18_L007_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039314"
gz1="$(_compress_if_exists 'SRR19039314_1' || true)"
gz2="$(_compress_if_exists 'SRR19039314_2' || true)"
gzs="$(_compress_if_exists 'SRR19039314' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_19_MGH2381_channel1_S2_L001_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_19_MGH2381_channel1_S2_L001_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039315"
gz1="$(_compress_if_exists 'SRR19039315_1' || true)"
gz2="$(_compress_if_exists 'SRR19039315_2' || true)"
gzs="$(_compress_if_exists 'SRR19039315' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_17_untreated-NSTnPo-PDAC_channel1_S1_L006_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_17_untreated-NSTnPo-PDAC_channel1_S1_L006_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039316"
gz1="$(_compress_if_exists 'SRR19039316_1' || true)"
gz2="$(_compress_if_exists 'SRR19039316_2' || true)"
gzs="$(_compress_if_exists 'SRR19039316' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_16_treated-NSTnPo-PDAC_channel1_S4_L006_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_16_treated-NSTnPo-PDAC_channel1_S4_L006_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039317"
gz1="$(_compress_if_exists 'SRR19039317_1' || true)"
gz2="$(_compress_if_exists 'SRR19039317_2' || true)"
gzs="$(_compress_if_exists 'SRR19039317' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_15v2_MGHR2v2_channel1_S3_L003_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_15v2_MGHR2v2_channel1_S3_L003_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039318"
gz1="$(_compress_if_exists 'SRR19039318_1' || true)"
gz2="$(_compress_if_exists 'SRR19039318_2' || true)"
gzs="$(_compress_if_exists 'SRR19039318' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_15_MGHR2_channel1_S6_L002_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_15_MGHR2_channel1_S6_L002_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039319"
gz1="$(_compress_if_exists 'SRR19039319_1' || true)"
gz2="$(_compress_if_exists 'SRR19039319_2' || true)"
gzs="$(_compress_if_exists 'SRR19039319' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_14v2_MGHR1v2_channel1_S15_L007_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_14v2_MGHR1v2_channel1_S15_L007_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039320"
gz1="$(_compress_if_exists 'SRR19039320_1' || true)"
gz2="$(_compress_if_exists 'SRR19039320_2' || true)"
gzs="$(_compress_if_exists 'SRR19039320' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_14_MGHR1_channel1_S5_L002_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_14_MGHR1_channel1_S5_L002_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039321"
gz1="$(_compress_if_exists 'SRR19039321_1' || true)"
gz2="$(_compress_if_exists 'SRR19039321_2' || true)"
gzs="$(_compress_if_exists 'SRR19039321' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_13v2_MGH2675v2_channel1_S10_L005_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_13v2_MGH2675v2_channel1_S10_L005_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039322"
gz1="$(_compress_if_exists 'SRR19039322_1' || true)"
gz2="$(_compress_if_exists 'SRR19039322_2' || true)"
gzs="$(_compress_if_exists 'SRR19039322' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_13redo_MGH2675redo_channel1_S3_L001_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_13redo_MGH2675redo_channel1_S3_L001_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039323"
gz1="$(_compress_if_exists 'SRR19039323_1' || true)"
gz2="$(_compress_if_exists 'SRR19039323_2' || true)"
gzs="$(_compress_if_exists 'SRR19039323' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_13_treated-NSTnPo-PDAC_channel1_S10_L004_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_13_treated-NSTnPo-PDAC_channel1_S10_L004_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039324"
gz1="$(_compress_if_exists 'SRR19039324_1' || true)"
gz2="$(_compress_if_exists 'SRR19039324_2' || true)"
gzs="$(_compress_if_exists 'SRR19039324' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_12v2_MGHR7v2_channel1_S11_L006_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_12v2_MGHR7v2_channel1_S11_L006_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039325"
gz1="$(_compress_if_exists 'SRR19039325_1' || true)"
gz2="$(_compress_if_exists 'SRR19039325_2' || true)"
gzs="$(_compress_if_exists 'SRR19039325' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_12_MGHR7_channel1_S1_L001_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_12_MGHR7_channel1_S1_L001_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039326"
gz1="$(_compress_if_exists 'SRR19039326_1' || true)"
gz2="$(_compress_if_exists 'SRR19039326_2' || true)"
gzs="$(_compress_if_exists 'SRR19039326' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_11v2_MGHR11v2_channel1_S21_L008_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_11v2_MGHR11v2_channel1_S21_L008_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039327"
gz1="$(_compress_if_exists 'SRR19039327_1' || true)"
gz2="$(_compress_if_exists 'SRR19039327_2' || true)"
gzs="$(_compress_if_exists 'SRR19039327' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_11_MGHR11_channel1_S12_L003_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_11_MGHR11_channel1_S12_L003_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039328"
gz1="$(_compress_if_exists 'SRR19039328_1' || true)"
gz2="$(_compress_if_exists 'SRR19039328_2' || true)"
gzs="$(_compress_if_exists 'SRR19039328' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_10v2_MGHR6v2_channel1_S12_L006_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_10v2_MGHR6v2_channel1_S12_L006_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039329"
gz1="$(_compress_if_exists 'SRR19039329_1' || true)"
gz2="$(_compress_if_exists 'SRR19039329_2' || true)"
gzs="$(_compress_if_exists 'SRR19039329' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_10_MGHR6_channel1_S4_L001_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_10_MGHR6_channel1_S4_L001_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039330"
gz1="$(_compress_if_exists 'SRR19039330_1' || true)"
gz2="$(_compress_if_exists 'SRR19039330_2' || true)"
gzs="$(_compress_if_exists 'SRR19039330' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_9v2_MGH2076v2_channel1_S9_L005_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_9v2_MGH2076v2_channel1_S9_L005_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039331"
gz1="$(_compress_if_exists 'SRR19039331_1' || true)"
gz2="$(_compress_if_exists 'SRR19039331_2' || true)"
gzs="$(_compress_if_exists 'SRR19039331' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_9_MGH2076_channel1_S1_L001_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_9_MGH2076_channel1_S1_L001_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039332"
gz1="$(_compress_if_exists 'SRR19039332_1' || true)"
gz2="$(_compress_if_exists 'SRR19039332_2' || true)"
gzs="$(_compress_if_exists 'SRR19039332' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_8v2_MGH2101v2_channel1_S6_L004_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_8v2_MGH2101v2_channel1_S6_L004_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039333"
gz1="$(_compress_if_exists 'SRR19039333_1' || true)"
gz2="$(_compress_if_exists 'SRR19039333_2' || true)"
gzs="$(_compress_if_exists 'SRR19039333' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_8redo_MGH2101redo_channel1_S4_L001_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_8redo_MGH2101redo_channel1_S4_L001_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039334"
gz1="$(_compress_if_exists 'SRR19039334_1' || true)"
gz2="$(_compress_if_exists 'SRR19039334_2' || true)"
gzs="$(_compress_if_exists 'SRR19039334' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_8_treated-NSTnPo-PDAC_channel1_S2_L006_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_8_treated-NSTnPo-PDAC_channel1_S2_L006_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039335"
gz1="$(_compress_if_exists 'SRR19039335_1' || true)"
gz2="$(_compress_if_exists 'SRR19039335_2' || true)"
gzs="$(_compress_if_exists 'SRR19039335' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_7_treated-NSTnPo-PDAC_channel1_S2_L007_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_7_treated-NSTnPo-PDAC_channel1_S2_L007_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039336"
gz1="$(_compress_if_exists 'SRR19039336_1' || true)"
gz2="$(_compress_if_exists 'SRR19039336_2' || true)"
gzs="$(_compress_if_exists 'SRR19039336' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_6_treated-CST-PDAC_channel1_S2_L001_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_6_treated-CST-PDAC_channel1_S2_L001_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039337"
gz1="$(_compress_if_exists 'SRR19039337_1' || true)"
gz2="$(_compress_if_exists 'SRR19039337_2' || true)"
gzs="$(_compress_if_exists 'SRR19039337' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_6_treated-NSTnPo-PDAC_channel1_S1_L001_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_6_treated-NSTnPo-PDAC_channel1_S1_L001_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039338"
gz1="$(_compress_if_exists 'SRR19039338_1' || true)"
gz2="$(_compress_if_exists 'SRR19039338_2' || true)"
gzs="$(_compress_if_exists 'SRR19039338' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_5_treated-NSTnPo-PDAC_channel1_S3_L007_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_5_treated-NSTnPo-PDAC_channel1_S3_L007_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039339"
gz1="$(_compress_if_exists 'SRR19039339_1' || true)"
gz2="$(_compress_if_exists 'SRR19039339_2' || true)"
gzs="$(_compress_if_exists 'SRR19039339' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_4_treated-NSTnPo-PDAC_channel1_S2_L001_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_4_treated-NSTnPo-PDAC_channel1_S2_L001_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039340"
gz1="$(_compress_if_exists 'SRR19039340_1' || true)"
gz2="$(_compress_if_exists 'SRR19039340_2' || true)"
gzs="$(_compress_if_exists 'SRR19039340' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_3v2_MGHR4v2_channel1_S19_L008_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_3v2_MGHR4v2_channel1_S19_L008_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039341"
gz1="$(_compress_if_exists 'SRR19039341_1' || true)"
gz2="$(_compress_if_exists 'SRR19039341_2' || true)"
gzs="$(_compress_if_exists 'SRR19039341' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_3_MGHR4_channel1_S2_L001_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_3_MGHR4_channel1_S2_L001_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039342"
gz1="$(_compress_if_exists 'SRR19039342_1' || true)"
gz2="$(_compress_if_exists 'SRR19039342_2' || true)"
gzs="$(_compress_if_exists 'SRR19039342' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_2_treated-NSTnPo-PDAC_channel1_S1_L006_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_2_treated-NSTnPo-PDAC_channel1_S1_L006_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039343"
gz1="$(_compress_if_exists 'SRR19039343_1' || true)"
gz2="$(_compress_if_exists 'SRR19039343_2' || true)"
gzs="$(_compress_if_exists 'SRR19039343' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_1v2_MGHR5v2_channel1_S8_L005_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_1v2_MGHR5v2_channel1_S8_L005_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039344"
gz1="$(_compress_if_exists 'SRR19039344_1' || true)"
gz2="$(_compress_if_exists 'SRR19039344_2' || true)"
gzs="$(_compress_if_exists 'SRR19039344' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_1_MGHR5_channel1_S3_L001_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_1_MGHR5_channel1_S3_L001_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039345"
gz1="$(_compress_if_exists 'SRR19039345_1' || true)"
gz2="$(_compress_if_exists 'SRR19039345_2' || true)"
gzs="$(_compress_if_exists 'SRR19039345' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_U_18_untreated-NSTnPo-PDAC_channel1_S11_L004_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_U_18_untreated-NSTnPo-PDAC_channel1_S11_L004_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039346"
gz1="$(_compress_if_exists 'SRR19039346_1' || true)"
gz2="$(_compress_if_exists 'SRR19039346_2' || true)"
gzs="$(_compress_if_exists 'SRR19039346' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_U_18_untreated-NSTnPo-PDAC_channel1_S4_L005_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_U_18_untreated-NSTnPo-PDAC_channel1_S4_L005_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039347"
gz1="$(_compress_if_exists 'SRR19039347_1' || true)"
gz2="$(_compress_if_exists 'SRR19039347_2' || true)"
gzs="$(_compress_if_exists 'SRR19039347' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_U_17v2_MGHR16v2_channel1_S4_L003_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_U_17v2_MGHR16v2_channel1_S4_L003_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039348"
gz1="$(_compress_if_exists 'SRR19039348_1' || true)"
gz2="$(_compress_if_exists 'SRR19039348_2' || true)"
gzs="$(_compress_if_exists 'SRR19039348' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_U_17_MGHR16_channel1_S8_L002_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_U_17_MGHR16_channel1_S8_L002_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039349"
gz1="$(_compress_if_exists 'SRR19039349_1' || true)"
gz2="$(_compress_if_exists 'SRR19039349_2' || true)"
gzs="$(_compress_if_exists 'SRR19039349' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_U_16_untreated-NSTnPo-PDAC_channel1_S1_L001_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_U_16_untreated-NSTnPo-PDAC_channel1_S1_L001_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039350"
gz1="$(_compress_if_exists 'SRR19039350_1' || true)"
gz2="$(_compress_if_exists 'SRR19039350_2' || true)"
gzs="$(_compress_if_exists 'SRR19039350' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_U_15_untreated-NSTnPo-PDAC_channel1_S3_L005_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_U_15_untreated-NSTnPo-PDAC_channel1_S3_L005_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039351"
gz1="$(_compress_if_exists 'SRR19039351_1' || true)"
gz2="$(_compress_if_exists 'SRR19039351_2' || true)"
gzs="$(_compress_if_exists 'SRR19039351' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_T_18_treated-NSTnPo-PDAC_channel1_S3_L001_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_T_18_treated-NSTnPo-PDAC_channel1_S3_L001_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039352"
gz1="$(_compress_if_exists 'SRR19039352_1' || true)"
gz2="$(_compress_if_exists 'SRR19039352_2' || true)"
gzs="$(_compress_if_exists 'SRR19039352' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_U_14_untreated-NSTnPo-PDAC_channel1_S9_L003_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_U_14_untreated-NSTnPo-PDAC_channel1_S9_L003_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039353"
gz1="$(_compress_if_exists 'SRR19039353_1' || true)"
gz2="$(_compress_if_exists 'SRR19039353_2' || true)"
gzs="$(_compress_if_exists 'SRR19039353' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_U_1_untreated-NSTnPo-PDAC_channel1_S1_L001_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_U_1_untreated-NSTnPo-PDAC_channel1_S1_L001_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039354"
gz1="$(_compress_if_exists 'SRR19039354_1' || true)"
gz2="$(_compress_if_exists 'SRR19039354_2' || true)"
gzs="$(_compress_if_exists 'SRR19039354' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "010nuc_untreated-NSTnPo-PDAC_channel1_S8_L004_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "010nuc_untreated-NSTnPo-PDAC_channel1_S8_L004_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039355"
gz1="$(_compress_if_exists 'SRR19039355_1' || true)"
gz2="$(_compress_if_exists 'SRR19039355_2' || true)"
gzs="$(_compress_if_exists 'SRR19039355' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "010orgCRT_treated-NSTnPo-PDAC_channel1_S5_L007_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "010orgCRT_treated-NSTnPo-PDAC_channel1_S5_L007_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039356"
gz1="$(_compress_if_exists 'SRR19039356_1' || true)"
gz2="$(_compress_if_exists 'SRR19039356_2' || true)"
gzs="$(_compress_if_exists 'SRR19039356' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "Normal_010N_untreated-NSTnPo-PDAC_channel1_S10_L004_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "Normal_010N_untreated-NSTnPo-PDAC_channel1_S10_L004_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039357"
gz1="$(_compress_if_exists 'SRR19039357_1' || true)"
gz2="$(_compress_if_exists 'SRR19039357_2' || true)"
gzs="$(_compress_if_exists 'SRR19039357' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "Normal_2517_untreated-CST-pancreas_channel1_S1_L008_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "Normal_2517_untreated-CST-pancreas_channel1_S1_L008_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039358"
gz1="$(_compress_if_exists 'SRR19039358_1' || true)"
gz2="$(_compress_if_exists 'SRR19039358_2' || true)"
gzs="$(_compress_if_exists 'SRR19039358' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "Normal_2517_untreated-NSTnPo-pancreas_channel1_S3_L008_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "Normal_2517_untreated-NSTnPo-pancreas_channel1_S3_L008_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039359"
gz1="$(_compress_if_exists 'SRR19039359_1' || true)"
gz2="$(_compress_if_exists 'SRR19039359_2' || true)"
gzs="$(_compress_if_exists 'SRR19039359' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "Normal_2517_untreated-TST-pancreas_channel1_S2_L008_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "Normal_2517_untreated-TST-pancreas_channel1_S2_L008_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039360"
gz1="$(_compress_if_exists 'SRR19039360_1' || true)"
gz2="$(_compress_if_exists 'SRR19039360_2' || true)"
gzs="$(_compress_if_exists 'SRR19039360' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "Normal_2540N_untreated-NSTnPo-PDAC_channel1_S3_L007_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "Normal_2540N_untreated-NSTnPo-PDAC_channel1_S3_L007_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039361"
gz1="$(_compress_if_exists 'SRR19039361_1' || true)"
gz2="$(_compress_if_exists 'SRR19039361_2' || true)"
gzs="$(_compress_if_exists 'SRR19039361' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "Normal_2548_untreated-NSTnPo-PDAC_channel1_S1_L007_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "Normal_2548_untreated-NSTnPo-PDAC_channel1_S1_L007_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039362"
gz1="$(_compress_if_exists 'SRR19039362_1' || true)"
gz2="$(_compress_if_exists 'SRR19039362_2' || true)"
gzs="$(_compress_if_exists 'SRR19039362' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "Normal_2675N_untreated-NSTnPo-PDAC_channel1_S4_L007_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "Normal_2675N_untreated-NSTnPo-PDAC_channel1_S4_L007_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039363"
gz1="$(_compress_if_exists 'SRR19039363_1' || true)"
gz2="$(_compress_if_exists 'SRR19039363_2' || true)"
gzs="$(_compress_if_exists 'SRR19039363' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "Normal_MGHR13v2_MGHR13v2_channel1_S13_L006_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "Normal_MGHR13v2_MGHR13v2_channel1_S13_L006_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039364"
gz1="$(_compress_if_exists 'SRR19039364_1' || true)"
gz2="$(_compress_if_exists 'SRR19039364_2' || true)"
gzs="$(_compress_if_exists 'SRR19039364' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "Normal_MGHR13_MGHR13_channel1_S14_L004_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "Normal_MGHR13_MGHR13_channel1_S14_L004_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039365"
gz1="$(_compress_if_exists 'SRR19039365_1' || true)"
gz2="$(_compress_if_exists 'SRR19039365_2' || true)"
gzs="$(_compress_if_exists 'SRR19039365' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_U_13_untreated-NSTnPo-PDAC_channel1_S1_L005_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_U_13_untreated-NSTnPo-PDAC_channel1_S1_L005_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039366"
gz1="$(_compress_if_exists 'SRR19039366_1' || true)"
gz2="$(_compress_if_exists 'SRR19039366_2' || true)"
gzs="$(_compress_if_exists 'SRR19039366' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_U_11_untreated-NSTnPo-PDAC_channel1_S4_L002_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_U_11_untreated-NSTnPo-PDAC_channel1_S4_L002_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039367"
gz1="$(_compress_if_exists 'SRR19039367_1' || true)"
gz2="$(_compress_if_exists 'SRR19039367_2' || true)"
gzs="$(_compress_if_exists 'SRR19039367' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_U_10redo_untreated-NSTnPo-PDAC_channel1_S1_L003_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_U_10redo_untreated-NSTnPo-PDAC_channel1_S1_L003_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039368"
gz1="$(_compress_if_exists 'SRR19039368_1' || true)"
gz2="$(_compress_if_exists 'SRR19039368_2' || true)"
gzs="$(_compress_if_exists 'SRR19039368' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_U_12_untreated-NSTnPo-PDAC_channel1_S9_L004_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_U_12_untreated-NSTnPo-PDAC_channel1_S9_L004_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039369"
gz1="$(_compress_if_exists 'SRR19039369_1' || true)"
gz2="$(_compress_if_exists 'SRR19039369_2' || true)"
gzs="$(_compress_if_exists 'SRR19039369' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_U_10_untreated-NSTnPo-PDAC_channel1_S2_L001_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_U_10_untreated-NSTnPo-PDAC_channel1_S2_L001_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039370"
gz1="$(_compress_if_exists 'SRR19039370_1' || true)"
gz2="$(_compress_if_exists 'SRR19039370_2' || true)"
gzs="$(_compress_if_exists 'SRR19039370' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_U_9_treated-NSTnPo-PDAC_channel1_S2_L006_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_U_9_treated-NSTnPo-PDAC_channel1_S2_L006_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039371"
gz1="$(_compress_if_exists 'SRR19039371_1' || true)"
gz2="$(_compress_if_exists 'SRR19039371_2' || true)"
gzs="$(_compress_if_exists 'SRR19039371' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_U_8v2_MGHR17v2_channel1_S16_L007_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_U_8v2_MGHR17v2_channel1_S16_L007_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039372"
gz1="$(_compress_if_exists 'SRR19039372_1' || true)"
gz2="$(_compress_if_exists 'SRR19039372_2' || true)"
gzs="$(_compress_if_exists 'SRR19039372' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_U_8_MGHR17_channel1_S9_L003_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_U_8_MGHR17_channel1_S9_L003_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039373"
gz1="$(_compress_if_exists 'SRR19039373_1' || true)"
gz2="$(_compress_if_exists 'SRR19039373_2' || true)"
gzs="$(_compress_if_exists 'SRR19039373' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_U_7_untreated-NSTnPo-PDAC_channel1_S12_L004_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_U_7_untreated-NSTnPo-PDAC_channel1_S12_L004_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039374"
gz1="$(_compress_if_exists 'SRR19039374_1' || true)"
gz2="$(_compress_if_exists 'SRR19039374_2' || true)"
gzs="$(_compress_if_exists 'SRR19039374' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_U_6_untreated-NSTnPo-PDAC_channel1_S5_L002_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_U_6_untreated-NSTnPo-PDAC_channel1_S5_L002_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039375"
gz1="$(_compress_if_exists 'SRR19039375_1' || true)"
gz2="$(_compress_if_exists 'SRR19039375_2' || true)"
gzs="$(_compress_if_exists 'SRR19039375' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_U_4_untreated-NSTnPo-PDAC_channel1_S5_L005_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_U_4_untreated-NSTnPo-PDAC_channel1_S5_L005_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039376"
gz1="$(_compress_if_exists 'SRR19039376_1' || true)"
gz2="$(_compress_if_exists 'SRR19039376_2' || true)"
gzs="$(_compress_if_exists 'SRR19039376' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_U_3_untreated-NSTnPo-PDAC_channel1_S7_L003_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_U_3_untreated-NSTnPo-PDAC_channel1_S7_L003_R2_001.fastq.gz"
fi

fasterq-dump --split-files "SRR19039377"
gz1="$(_compress_if_exists 'SRR19039377_1' || true)"
gz2="$(_compress_if_exists 'SRR19039377_2' || true)"
gzs="$(_compress_if_exists 'SRR19039377' || true)"
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz1" ]; then
  mv -f "$gz1" "PDAC_U_5_untreated-NSTnPo-PDAC_channel1_S4_L001_R1_001.fastq.gz"
fi
if [ "$RENAME_SRA_TO_ORIGINAL" = "1" ] && [ -n "$gz2" ]; then
  mv -f "$gz2" "PDAC_U_5_untreated-NSTnPo-PDAC_channel1_S4_L001_R2_001.fastq.gz"
fi


# Option B: Direct download (larger .sra files)
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039304/SRR19039304"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039305/SRR19039305"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039306/SRR19039306"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039307/SRR19039307"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039308/SRR19039308"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039309/SRR19039309"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039310/SRR19039310"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039311/SRR19039311"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039312/SRR19039312"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039313/SRR19039313"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039314/SRR19039314"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039315/SRR19039315"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039316/SRR19039316"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039317/SRR19039317"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039318/SRR19039318"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039319/SRR19039319"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039320/SRR19039320"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039321/SRR19039321"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039322/SRR19039322"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039323/SRR19039323"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039324/SRR19039324"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039325/SRR19039325"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039326/SRR19039326"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039327/SRR19039327"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039328/SRR19039328"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039329/SRR19039329"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039330/SRR19039330"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039331/SRR19039331"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039332/SRR19039332"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039333/SRR19039333"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039334/SRR19039334"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039335/SRR19039335"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039336/SRR19039336"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039337/SRR19039337"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039338/SRR19039338"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039339/SRR19039339"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039340/SRR19039340"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039341/SRR19039341"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039342/SRR19039342"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039343/SRR19039343"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039344/SRR19039344"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039345/SRR19039345"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039346/SRR19039346"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039347/SRR19039347"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039348/SRR19039348"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039349/SRR19039349"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039350/SRR19039350"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039351/SRR19039351"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039352/SRR19039352"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039353/SRR19039353"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039354/SRR19039354"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039355/SRR19039355"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039356/SRR19039356"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039357/SRR19039357"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039358/SRR19039358"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039359/SRR19039359"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039360/SRR19039360"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039361/SRR19039361"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039362/SRR19039362"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039363/SRR19039363"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039364/SRR19039364"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039365/SRR19039365"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039366/SRR19039366"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039367/SRR19039367"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039368/SRR19039368"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039369/SRR19039369"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039370/SRR19039370"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039371/SRR19039371"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039372/SRR19039372"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039373/SRR19039373"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039374/SRR19039374"
curl -L -O -C - "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos1/sra-pub-zq-38/SRR019/19039/SRR19039375/SRR19039375.lite.1"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039376/SRR19039376"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039377/SRR19039377"

# --- Additional data files ---
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039354/SRR19039354"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039355/SRR19039355"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039356/SRR19039356"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039357/SRR19039357"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039358/SRR19039358"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039359/SRR19039359"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039360/SRR19039360"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039361/SRR19039361"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039362/SRR19039362"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039364/SRR19039364"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039363/SRR19039363"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039329/SRR19039329"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039328/SRR19039328"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039327/SRR19039327"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039326/SRR19039326"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039325/SRR19039325"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039324/SRR19039324"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039322/SRR19039322"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039323/SRR19039323"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039321/SRR19039321"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039320/SRR19039320"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039319/SRR19039319"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039318/SRR19039318"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039317/SRR19039317"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039316/SRR19039316"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039315/SRR19039315"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039351/SRR19039351"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039314/SRR19039314"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039313/SRR19039313"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039344/SRR19039344"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039343/SRR19039343"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039312/SRR19039312"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039311/SRR19039311"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039310/SRR19039310"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039309/SRR19039309"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039308/SRR19039308"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039307/SRR19039307"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039305/SRR19039305"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039304/SRR19039304"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039342/SRR19039342"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039341/SRR19039341"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039340/SRR19039340"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039339/SRR19039339"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039338/SRR19039338"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039336/SRR19039336"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039337/SRR19039337"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039335/SRR19039335"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039333/SRR19039333"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039334/SRR19039334"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039332/SRR19039332"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039331/SRR19039331"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039330/SRR19039330"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039367/SRR19039367"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039369/SRR19039369"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039366/SRR19039366"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039368/SRR19039368"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039365/SRR19039365"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039352/SRR19039352"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039350/SRR19039350"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039349/SRR19039349"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039348/SRR19039348"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039347/SRR19039347"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039345/SRR19039345"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039346/SRR19039346"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039353/SRR19039353"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039306/SRR19039306"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039376/SRR19039376"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039377/SRR19039377"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039374/SRR19039374"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039373/SRR19039373"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039372/SRR19039372"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039371/SRR19039371"
curl -L -O -C - "https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR19039370/SRR19039370"
curl -L -O -C - "https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos1/sra-pub-zq-38/SRR019/19039/SRR19039375/SRR19039375.lite.1"

echo "Download complete. Files saved to $OUTDIR"