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GSE138197

GSE GEO
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Alternative polyadenylation mediates genetic regulation of gene expression

Organism: Homo sapiens
Platform: GPL18573
Samples: 104
Experiment Types:
Other
Submitted: Sep 30 2019
Last Updated: Jul 20 2020
Status: Public on Jun 23 2020
Contact: Yoav,,GiladLi (University of Chicago)

Relations

BioProject: https://www.ncbi.nlm.nih.gov/bioproject/PRJNA575018 SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRP223759

Summary

Little is known about co-transcriptional or post-transcriptional regulatory mechanisms linking noncoding variation to variation in organismal traits. To begin addressing this gap, we used 3' Seq to study the impact of genetic variation on alternative polyadenylation (APA) in the nuclear and total mRNA fractions of 52 HapMap Yoruba human lymphoblastoid cell lines. We mapped 602 APA quantitative trait loci (apaQTLs) at 10% FDR, of which 152 were nuclear specific. Effect sizes at intronic apaQTLs are negatively correlated with eQTL effect sizes. These observations suggest genetic variants can decrease mRNA expression levels by increasing usage of intronic PAS. We also identified 24 apaQTLs associated with protein levels, but not mRNA expression. Finally, we found that 19% of apaQTLs can be associated with disease. Thus, our work demonstrates that APA links genetic variation to variation in gene expression, protein expression, and disease risk, and reveals uncharted modes of genetic regulation.

Overall Design

We extracted whole cell and nuclear mRNA from 52 human LCLs and submitted them for 3' high throughput sequencing.

Analysis (6 steps)

View Data Processing
Processing steps for GSE138197
  1. map to HG19 with WASP output mode.
  2. Remove reads not passing WASP multimapping.
  3. Clean for mispriming by removing reads with 6 A's upstream of 7 of 10 As in upstream sequence.
  4. Merge all BAM files and call peaks with inhouse scripts (avaialbe on github)
  5. Assign PAS to genes using RefSeq annoations
  6. Remove PAS used on average <5% in total or nuclear individuals

Supplementary Files (2)

GSE138197_APAPAS_GeneLocAnno.5perc.bed.gz Download
GSE138197_MetaDataSequencing.txt.gz Download
GEO Samples (104)
GSM4101645 GSM4101646 GSM4101647 GSM4101648 GSM4101649 GSM4101650 GSM4101651 GSM4101652 GSM4101653 GSM4101654 GSM4101655 GSM4101656 GSM4101657 GSM4101658 GSM4101659 GSM4101660 GSM4101661 GSM4101662 GSM4101663 GSM4101664 GSM4101665 GSM4101666 GSM4101667 GSM4101668 GSM4101669 GSM4101670 GSM4101671 GSM4101672 GSM4101673 GSM4101674 GSM4101675 GSM4101676 GSM4101677 GSM4101678 GSM4101679 GSM4101680 GSM4101681 GSM4101682 GSM4101683 GSM4101684 GSM4101685 GSM4101686 GSM4101687 GSM4101688 GSM4101689 GSM4101690 GSM4101691 GSM4101692 GSM4101693 GSM4101694 GSM4101695 GSM4101696 GSM4101697 GSM4101698 GSM4101699 GSM4101700 GSM4101701 GSM4101702 GSM4101703 GSM4101704 GSM4101705 GSM4101706 GSM4101707 GSM4101708 GSM4101709 GSM4101710 GSM4101711 GSM4101712 GSM4101713 GSM4101714 GSM4101715 GSM4101716 GSM4101717 GSM4101718 GSM4101719 GSM4101720 GSM4101721 GSM4101722 GSM4101723 GSM4101724 GSM4101725 GSM4101726 GSM4101727 GSM4101728 GSM4101729 GSM4101730 GSM4101731 GSM4101732 GSM4101733 GSM4101734 GSM4101735 GSM4101736 GSM4101737 GSM4101738 GSM4101739 GSM4101740 GSM4101741 GSM4101742 GSM4101743 GSM4101744 GSM4101745 GSM4101746 GSM4101747 GSM4101748

Dataset Citations (1)

PubMed citation (PMID 32584258)

SRA Experiments (104) and Runs (104)

Total: 89330 MB
SRX6925878 SRP223759 RNA-Seq SINGLE
GSM4101645: 18486_N; Homo sapiens; RNA-Seq
Sample: SRS5456725
BioProject: PRJNA575018
BioSample: SAMN12875567
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18486
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205923 16151612 1340583796 660.18 YL-SP-18486-N-combined.fastq.gz, SRR10205923, SRR10205923.lite SRA
SRX6925879 SRP223759 RNA-Seq SINGLE
GSM4101646: 18486_T; Homo sapiens; RNA-Seq
Sample: SRS5456726
BioProject: PRJNA575018
BioSample: SAMN12875566
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18486
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205924 15669004 1300527332 638.59 YL-SP-18486-T-combined.fastq.gz, SRR10205924, SRR10205924.lite SRA
SRX6925880 SRP223759 RNA-Seq SINGLE
GSM4101647: 18499_N; Homo sapiens; RNA-Seq
Sample: SRS5456727
BioProject: PRJNA575018
BioSample: SAMN12875565
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18499
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205925 18165650 1507748950 744.49 YL-SP-18499-N-combined.fastq.gz, SRR10205925, SRR10205925.lite SRA
SRX6925881 SRP223759 RNA-Seq SINGLE
GSM4101672: 19239_T; Homo sapiens; RNA-Seq
Sample: SRS5456728
BioProject: PRJNA575018
BioSample: SAMN12875656
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19239
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205950 16529402 1371940366 675.64 YL-SP-19239-T-combined.fastq.gz, SRR10205950.lite, SRR10205950 SRA
SRX6925882 SRP223759 RNA-Seq SINGLE
GSM4101673: 19257_N; Homo sapiens; RNA-Seq
Sample: SRS5456729
BioProject: PRJNA575018
BioSample: SAMN12875654
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19257
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205951 16105684 1336771772 659.92 YL-SP-19257-N-combined.fastq.gz, SRR10205951, SRR10205951.lite SRA
SRX6925883 SRP223759 RNA-Seq SINGLE
GSM4101674: 19257_T; Homo sapiens; RNA-Seq
Sample: SRS5456730
BioProject: PRJNA575018
BioSample: SAMN12875652
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19257
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205952 17296428 1435603524 704.89 YL-SP-19257-T-combined.fastq.gz, SRR10205952, SRR10205952.lite SRA
SRX6925884 SRP223759 RNA-Seq SINGLE
GSM4101675: 18511_T; Homo sapiens; RNA-Seq
Sample: SRS5456731
BioProject: PRJNA575018
BioSample: SAMN12875651
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18511
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205953 19258274 1598436742 777.53 YL-SP-18511-T-combined.fastq.gz, SRR10205953, SRR10205953.lite SRA
SRX6925885 SRP223759 RNA-Seq SINGLE
GSM4101676: 18511_N; Homo sapiens; RNA-Seq
Sample: SRS5456732
BioProject: PRJNA575018
BioSample: SAMN12875649
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18511
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205954 19737472 1638210176 797.24 YL-SP-18511-N-combined.fastq.gz, SRR10205954.lite, SRR10205954 SRA
SRX6925886 SRP223759 RNA-Seq SINGLE
GSM4101677: 18519_T; Homo sapiens; RNA-Seq
Sample: SRS5456733
BioProject: PRJNA575018
BioSample: SAMN12875648
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18519
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205955 18859404 1565330532 760.65 YL-SP-18519-T-combined.fastq.gz, SRR10205955, SRR10205955.lite SRA
SRX6925887 SRP223759 RNA-Seq SINGLE
GSM4101678: 18519_N; Homo sapiens; RNA-Seq
Sample: SRS5456734
BioProject: PRJNA575018
BioSample: SAMN12875646
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18519
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205956 19614565 1628008895 792.19 YL-SP-18519-N-combined.fastq.gz, SRR10205956, SRR10205956.lite SRA
SRX6925888 SRP223759 RNA-Seq SINGLE
GSM4101679: 18520_T; Homo sapiens; RNA-Seq
Sample: SRS5456735
BioProject: PRJNA575018
BioSample: SAMN12875645
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18520
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205957 20697371 1717881793 835.9 YL-SP-18520-T-combined.fastq.gz, SRR10205957.lite, SRR10205957 SRA
SRX6925889 SRP223759 RNA-Seq SINGLE
GSM4101680: 18520_N; Homo sapiens; RNA-Seq
Sample: SRS5456736
BioProject: PRJNA575018
BioSample: SAMN12875643
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18520
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205958 19218158 1595107114 777.56 YL-SP-18520-N-combined.fastq.gz, SRR10205958, SRR10205958.lite SRA
SRX6925890 SRP223759 RNA-Seq SINGLE
GSM4101681: 19092_T; Homo sapiens; RNA-Seq
Sample: SRS5456737
BioProject: PRJNA575018
BioSample: SAMN12875641
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19092
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205959 20438802 1696420566 823.11 YL-SP-19092-T-combined.fastq.gz, SRR10205959, SRR10205959.lite SRA
SRX6925891 SRP223759 RNA-Seq SINGLE
GSM4101682: 19092_N; Homo sapiens; RNA-Seq
Sample: SRS5456738
BioProject: PRJNA575018
BioSample: SAMN12875640
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19092
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205960 19589313 1625912979 793.08 YL-SP-19092-N-combined.fastq.gz, SRR10205960.lite, SRR10205960 SRA
SRX6925892 SRP223759 RNA-Seq SINGLE
GSM4101683: 18858_T; Homo sapiens; RNA-Seq
Sample: SRS5456739
BioProject: PRJNA575018
BioSample: SAMN12875638
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18858
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205961 20066083 1665484889 809.44 SRR10205961, SRR10205961.lite, YL-SP-18858-T-combined.fastq.gz SRA
SRX6925893 SRP223759 RNA-Seq SINGLE
GSM4101684: 18858_N; Homo sapiens; RNA-Seq
Sample: SRS5456740
BioProject: PRJNA575018
BioSample: SAMN12875636
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18858
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205962 18462091 1532353553 747.42 YL-SP-18858-N-combined.fastq.gz, SRR10205962, SRR10205962.lite SRA
SRX6925894 SRP223759 RNA-Seq SINGLE
GSM4101685: 18861_T; Homo sapiens; RNA-Seq
Sample: SRS5456741
BioProject: PRJNA575018
BioSample: SAMN12875634
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18861
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205963 23406290 1942722070 942.49 YL-SP-18861-T-combined.fastq.gz, SRR10205963, SRR10205963.lite SRA
SRX6925895 SRP223759 RNA-Seq SINGLE
GSM4101686: 18861_N; Homo sapiens; RNA-Seq
Sample: SRS5456742
BioProject: PRJNA575018
BioSample: SAMN12875633
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18861
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205964 16594384 1377333872 674.57 YL-SP-18861-N-combined.fastq.gz, SRR10205964, SRR10205964.lite SRA
SRX6925896 SRP223759 RNA-Seq SINGLE
GSM4101687: 19119_T; Homo sapiens; RNA-Seq
Sample: SRS5456743
BioProject: PRJNA575018
BioSample: SAMN12875631
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19119
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205965 20413813 1694346479 822.64 YL-SP-19119-T-combined.fastq.gz, SRR10205965, SRR10205965.lite SRA
SRX6925897 SRP223759 RNA-Seq SINGLE
GSM4101688: 19119_N; Homo sapiens; RNA-Seq
Sample: SRS5456744
BioProject: PRJNA575018
BioSample: SAMN12875630
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19119
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205966 19429210 1612624430 785.41 YL-SP-19119-N-combined.fastq.gz, SRR10205966, SRR10205966.lite SRA
SRX6925898 SRP223759 RNA-Seq SINGLE
GSM4101689: 19130_T; Homo sapiens; RNA-Seq
Sample: SRS5456745
BioProject: PRJNA575018
BioSample: SAMN12875628
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19130
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205967 19577897 1624965451 789.82 YL-SP-19130-T-combined.fastq.gz, SRR10205967, SRR10205967.lite SRA
SRX6925899 SRP223759 RNA-Seq SINGLE
GSM4101690: 19130_N; Homo sapiens; RNA-Seq
Sample: SRS5456746
BioProject: PRJNA575018
BioSample: SAMN12875627
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19130
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205968 18190150 1509782450 737.12 YL-SP-19130-N-combined.fastq.gz, SRR10205968, SRR10205968.lite SRA
SRX6925900 SRP223759 RNA-Seq SINGLE
GSM4101691: 19210_T; Homo sapiens; RNA-Seq
Sample: SRS5456747
BioProject: PRJNA575018
BioSample: SAMN12875626
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19210
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205969 19794669 1642957527 798.63 YL-SP-19210-T-combined.fastq.gz, SRR10205969, SRR10205969.lite SRA
SRX6925901 SRP223759 RNA-Seq SINGLE
GSM4101692: 19210_N; Homo sapiens; RNA-Seq
Sample: SRS5456748
BioProject: PRJNA575018
BioSample: SAMN12875625
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19210
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205970 18940868 1572092044 767.29 YL-SP-19210-N-combined.fastq.gz, SRR10205970, SRR10205970.lite SRA
SRX6925902 SRP223759 RNA-Seq SINGLE
GSM4101693: 18909_T; Homo sapiens; RNA-Seq
Sample: SRS5456749
BioProject: PRJNA575018
BioSample: SAMN12875680
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18909
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205971 23234305 1928447315 937.82 YL-SP-18909-T-combined.fastq.gz, SRR10205971, SRR10205971.lite SRA
SRX6925903 SRP223759 RNA-Seq SINGLE
GSM4101694: 18909_N; Homo sapiens; RNA-Seq
Sample: SRS5456750
BioProject: PRJNA575018
BioSample: SAMN12875679
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18909
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205972 7415992 615527336 303.1 YL-SP-18909-N-combined.fastq.gz, SRR10205972, SRR10205972.lite SRA
SRX6925904 SRP223759 RNA-Seq SINGLE
GSM4101695: 18916_T; Homo sapiens; RNA-Seq
Sample: SRS5456751
BioProject: PRJNA575018
BioSample: SAMN12875678
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18916
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205973 19103425 1585584275 771.88 YL-SP-18916-T-combined.fastq.gz, SRR10205973, SRR10205973.lite SRA
SRX6925905 SRP223759 RNA-Seq SINGLE
GSM4101720: 19207_N; Homo sapiens; RNA-Seq
Sample: SRS5456752
BioProject: PRJNA575018
BioSample: SAMN12875669
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19207
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205998 20785459 1725193097 854.88 YL-SP-19207-N-combined.fastq.gz, SRR10205998, SRR10205998.lite SRA
SRX6925906 SRP223759 RNA-Seq SINGLE
GSM4101721: 18498_N; Homo sapiens; RNA-Seq
Sample: SRS5456753
BioProject: PRJNA575018
BioSample: SAMN12875668
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18498
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205999 29052161 2411329363 1108.43 YL-SP-18498_N-combined.fastq.gz, SRR10205999, SRR10205999.lite SRA
SRX6925907 SRP223759 RNA-Seq SINGLE
GSM4101722: 18498_T; Homo sapiens; RNA-Seq
Sample: SRS5456754
BioProject: PRJNA575018
BioSample: SAMN12875667
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18498
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10206000 31488185 2613519355 1207.11 YL-SP-18498_T-combined.fastq.gz, SRR10206000, SRR10206000.lite SRA
SRX6925908 SRP223759 RNA-Seq SINGLE
GSM4101723: 18504_N; Homo sapiens; RNA-Seq
Sample: SRS5456755
BioProject: PRJNA575018
BioSample: SAMN12875666
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18504
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10206001 29570502 2454351666 1125.32 YL-SP-18504_N-combined.fastq.gz, SRR10206001, SRR10206001.lite SRA
SRX6925909 SRP223759 RNA-Seq SINGLE
GSM4101724: 18504_T; Homo sapiens; RNA-Seq
Sample: SRS5456756
BioProject: PRJNA575018
BioSample: SAMN12875665
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18504
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10206002 30993979 2572500257 1186.05 YL-SP-18504_T-combined.fastq.gz, SRR10206002.lite, SRR10206002 SRA
SRX6925910 SRP223759 RNA-Seq SINGLE
GSM4101725: 18510_N; Homo sapiens; RNA-Seq
Sample: SRS5456757
BioProject: PRJNA575018
BioSample: SAMN12875664
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18510
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10206003 29666571 2462325393 1130.77 YL-SP-18510_N-combined.fastq.gz, SRR10206003, SRR10206003.lite SRA
SRX6925911 SRP223759 RNA-Seq SINGLE
GSM4101726: 18510_T; Homo sapiens; RNA-Seq
Sample: SRS5456758
BioProject: PRJNA575018
BioSample: SAMN12875663
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18510
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10206004 30376296 2521232568 1154.11 YL-SP-18510_T-combined.fastq.gz, SRR10206004, SRR10206004.lite SRA
SRX6925912 SRP223759 RNA-Seq SINGLE
GSM4101727: 18516_N; Homo sapiens; RNA-Seq
Sample: SRS5456759
BioProject: PRJNA575018
BioSample: SAMN12875662
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18516
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10206005 28068157 2329657031 1072.13 YL-SP-18516_N-combined.fastq.gz, SRR10206005, SRR10206005.lite SRA
SRX6925913 SRP223759 RNA-Seq SINGLE
GSM4101728: 18516_T; Homo sapiens; RNA-Seq
Sample: SRS5456760
BioProject: PRJNA575018
BioSample: SAMN12875661
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18516
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10206006 33939123 2816947209 1308.02 YL-SP-18516_T-combined.fastq.gz, SRR10206006, SRR10206006.lite SRA
SRX6925914 SRP223759 RNA-Seq SINGLE
GSM4101729: 18522_N; Homo sapiens; RNA-Seq
Sample: SRS5456761
BioProject: PRJNA575018
BioSample: SAMN12875660
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18522
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10206007 26791784 2223718072 1022.62 YL-SP-18522_N-combined.fastq.gz, SRR10206007, SRR10206007.lite SRA
SRX6925915 SRP223759 RNA-Seq SINGLE
GSM4101730: 18522_T; Homo sapiens; RNA-Seq
Sample: SRS5456762
BioProject: PRJNA575018
BioSample: SAMN12875659
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18522
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10206008 29982633 2488558539 1142.09 YL-SP-18522_T-combined.fastq.gz, SRR10206008, SRR10206008.lite SRA
SRX6925916 SRP223759 RNA-Seq SINGLE
GSM4101731: 18502_N; Homo sapiens; RNA-Seq
Sample: SRS5456763
BioProject: PRJNA575018
BioSample: SAMN12875657
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18502
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10206009 31148850 2585354550 1187.78 YL-SP-18502_N-combined.fastq.gz, SRR10206009, SRR10206009.lite SRA
SRX6925917 SRP223759 RNA-Seq SINGLE
GSM4101732: 18502_T; Homo sapiens; RNA-Seq
Sample: SRS5456764
BioProject: PRJNA575018
BioSample: SAMN12875584
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18502
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10206010 29147083 2419207889 1110.9 YL-SP-18502_T-combined.fastq.gz, SRR10206010, SRR10206010.lite SRA
SRX6925918 SRP223759 RNA-Seq SINGLE
GSM4101733: 18855_N; Homo sapiens; RNA-Seq
Sample: SRS5456765
BioProject: PRJNA575018
BioSample: SAMN12875583
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18855
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10206011 19687809 1634088147 746.27 YL-SP-18855_N-combined.fastq.gz, SRR10206011, SRR10206011.lite SRA
SRX6925919 SRP223759 RNA-Seq SINGLE
GSM4101734: 18855_T; Homo sapiens; RNA-Seq
Sample: SRS5456766
BioProject: PRJNA575018
BioSample: SAMN12875582
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18855
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10206012 29356959 2436627597 1116.57 YL-SP-18855_T-combined.fastq.gz, SRR10206012, SRR10206012.lite SRA
SRX6925920 SRP223759 RNA-Seq SINGLE
GSM4101735: 18852_N; Homo sapiens; RNA-Seq
Sample: SRS5456767
BioProject: PRJNA575018
BioSample: SAMN12875589
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18852
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10206013 29448717 2444243511 1126.8 YL-SP-18852_N-combined.fastq.gz, SRR10206013, SRR10206013.lite SRA
SRX6925921 SRP223759 RNA-Seq SINGLE
GSM4101736: 18852_T; Homo sapiens; RNA-Seq
Sample: SRS5456768
BioProject: PRJNA575018
BioSample: SAMN12875588
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18852
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10206014 31304453 2598269599 1191.48 YL-SP-18852_T-combined.fastq.gz, SRR10206014, SRR10206014.lite SRA
SRX6925922 SRP223759 RNA-Seq SINGLE
GSM4101737: 18856_N; Homo sapiens; RNA-Seq
Sample: SRS5456769
BioProject: PRJNA575018
BioSample: SAMN12875587
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18856
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10206015 30854469 2560920927 1190.36 YL-SP-18856_N-combined.fastq.gz, SRR10206015, SRR10206015.lite SRA
SRX6925923 SRP223759 RNA-Seq SINGLE
GSM4101738: 18856_T; Homo sapiens; RNA-Seq
Sample: SRS5456770
BioProject: PRJNA575018
BioSample: SAMN12875586
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18856
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10206016 28258784 2345479072 1071.28 YL-SP-18856_T-combined.fastq.gz, SRR10206016, SRR10206016.lite SRA
SRX6925924 SRP223759 RNA-Seq SINGLE
GSM4101739: 18862_N; Homo sapiens; RNA-Seq
Sample: SRS5456771
BioProject: PRJNA575018
BioSample: SAMN12875585
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18862
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10206017 31672016 2628777328 1208.46 YL-SP-18862_N-combined.fastq.gz, SRR10206017, SRR10206017.lite SRA
SRX6925925 SRP223759 RNA-Seq SINGLE
GSM4101740: 18862_T; Homo sapiens; RNA-Seq
Sample: SRS5456772
BioProject: PRJNA575018
BioSample: SAMN12875581
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18862
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10206018 31952731 2652076673 1216.81 YL-SP-18862_T-combined.fastq.gz, SRR10206018, SRR10206018.lite SRA
SRX6925926 SRP223759 RNA-Seq SINGLE
GSM4101741: 18913_N; Homo sapiens; RNA-Seq
Sample: SRS5456773
BioProject: PRJNA575018
BioSample: SAMN12875580
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18913
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10206019 29687149 2464033367 1127.61 YL-SP-18913_N-combined.fastq.gz, SRR10206019, SRR10206019.lite SRA
SRX6925927 SRP223759 RNA-Seq SINGLE
GSM4101742: 18913_T; Homo sapiens; RNA-Seq
Sample: SRS5456774
BioProject: PRJNA575018
BioSample: SAMN12875579
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18913
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10206020 30386848 2522108384 1156.52 YL-SP-18913_T-combined.fastq.gz, SRR10206020, SRR10206020.lite SRA
SRX6925928 SRP223759 RNA-Seq SINGLE
GSM4101743: 19101_N; Homo sapiens; RNA-Seq
Sample: SRS5456775
BioProject: PRJNA575018
BioSample: SAMN12875623
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19101
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10206021 31674188 2628957604 1209.46 YL-SP-19101_N-combined.fastq.gz, SRR10206021, SRR10206021.lite SRA
SRX6925929 SRP223759 RNA-Seq SINGLE
GSM4101744: 19101_T; Homo sapiens; RNA-Seq
Sample: SRS5456776
BioProject: PRJNA575018
BioSample: SAMN12875622
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19101
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10206022 32860859 2727451297 1252.71 YL-SP-19101_T-combined.fastq.gz, SRR10206022, SRR10206022.lite SRA
SRX6925930 SRP223759 RNA-Seq SINGLE
GSM4101745: 19138_N; Homo sapiens; RNA-Seq
Sample: SRS5456777
BioProject: PRJNA575018
BioSample: SAMN12875621
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19138
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10206023 27298844 2265804052 1037.02 YL-SP-19138_N-combined.fastq.gz, SRR10206023, SRR10206023.lite SRA
SRX6925931 SRP223759 RNA-Seq SINGLE
GSM4101746: 19138_T; Homo sapiens; RNA-Seq
Sample: SRS5456778
BioProject: PRJNA575018
BioSample: SAMN12875620
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19138
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10206024 32958506 2735555998 1259.6 YL-SP-19138_T-combined.fastq.gz, SRR10206024, SRR10206024.lite SRA
SRX6925932 SRP223759 RNA-Seq SINGLE
GSM4101747: 18907_N; Homo sapiens; RNA-Seq
Sample: SRS5456779
BioProject: PRJNA575018
BioSample: SAMN12875619
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18907
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10206025 29747881 2469074123 1133.06 YL-SP-18907_N-combined.fastq.gz, SRR10206025, SRR10206025.lite SRA
SRX6925933 SRP223759 RNA-Seq SINGLE
GSM4101748: 18907_T; Homo sapiens; RNA-Seq
Sample: SRS5456780
BioProject: PRJNA575018
BioSample: SAMN12875618
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18907
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10206026 30089508 2497429164 1150.07 YL-SP-18907_T-combined.fastq.gz, SRR10206026, SRR10206026.lite SRA
SRX6925934 SRP223759 RNA-Seq SINGLE
GSM4101696: 18916_N; Homo sapiens; RNA-Seq
Sample: SRS5456781
BioProject: PRJNA575018
BioSample: SAMN12875677
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18916
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205974 18538502 1538695666 752.36 YL-SP-18916-N-combined.fastq.gz, SRR10205974, SRR10205974.lite SRA
SRX6925935 SRP223759 RNA-Seq SINGLE
GSM4101697: 19160_T; Homo sapiens; RNA-Seq
Sample: SRS5456782
BioProject: PRJNA575018
BioSample: SAMN12875676
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19160
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205975 7579980 629138340 308.06 YL-SP-19160-T-combined.fastq.gz, SRR10205975, SRR10205975.lite SRA
SRX6925936 SRP223759 RNA-Seq SINGLE
GSM4101698: 19160_N; Homo sapiens; RNA-Seq
Sample: SRS5456783
BioProject: PRJNA575018
BioSample: SAMN12875675
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19160
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205976 18302461 1519104263 741.4 YL-SP-19160-N-combined.fastq.gz, SRR10205976, SRR10205976.lite SRA
SRX6925937 SRP223759 RNA-Seq SINGLE
GSM4101699: 19171_T; Homo sapiens; RNA-Seq
Sample: SRS5456784
BioProject: PRJNA575018
BioSample: SAMN12875674
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19171
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205977 18840617 1563771211 778.69 YL-SP-19171-T-combined.fastq.gz, SRR10205977, SRR10205977.lite SRA
SRX6925938 SRP223759 RNA-Seq SINGLE
GSM4101700: 19171_N; Homo sapiens; RNA-Seq
Sample: SRS5456785
BioProject: PRJNA575018
BioSample: SAMN12875673
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19171
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205978 18972819 1574743977 783.78 YL-SP-19171-N-combined.fastq.gz, SRR10205978, SRR10205978.lite SRA
SRX6925939 SRP223759 RNA-Seq SINGLE
GSM4101701: 19200_T; Homo sapiens; RNA-Seq
Sample: SRS5456786
BioProject: PRJNA575018
BioSample: SAMN12875672
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19200
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205979 19705167 1635528861 810.88 YL-SP-19200-T-combined.fastq.gz, SRR10205979, SRR10205979.lite SRA
SRX6925940 SRP223759 RNA-Seq SINGLE
GSM4101702: 19200_N; Homo sapiens; RNA-Seq
Sample: SRS5456787
BioProject: PRJNA575018
BioSample: SAMN12875617
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19200
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205980 20145930 1672112190 829.04 YL-SP-19200-N-combined.fastq.gz, SRR10205980, SRR10205980.lite SRA
SRX6925941 SRP223759 RNA-Seq SINGLE
GSM4101703: 19137_T; Homo sapiens; RNA-Seq
Sample: SRS5456788
BioProject: PRJNA575018
BioSample: SAMN12875616
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19137
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205981 18716870 1553500210 771.99 YL-SP-19137-T-combined.fastq.gz, SRR10205981, SRR10205981.lite SRA
SRX6925942 SRP223759 RNA-Seq SINGLE
GSM4101704: 19137_N; Homo sapiens; RNA-Seq
Sample: SRS5456789
BioProject: PRJNA575018
BioSample: SAMN12875615
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19137
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205982 18422473 1529065259 766.74 YL-SP-19137-N-combined.fastq.gz, SRR10205982, SRR10205982.lite SRA
SRX6925943 SRP223759 RNA-Seq SINGLE
GSM4101705: 19152_T; Homo sapiens; RNA-Seq
Sample: SRS5456790
BioProject: PRJNA575018
BioSample: SAMN12875614
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19152
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205983 18161577 1507410891 754.79 YL-SP-19152-T-combined.fastq.gz, SRR10205983, SRR10205983.lite SRA
SRX6925944 SRP223759 RNA-Seq SINGLE
GSM4101706: 19152_N; Homo sapiens; RNA-Seq
Sample: SRS5456791
BioProject: PRJNA575018
BioSample: SAMN12875613
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19152
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205984 32349650 2685020950 1328.94 YL-SP-19152-N-combined.fastq.gz, SRR10205984, SRR10205984.lite SRA
SRX6925945 SRP223759 RNA-Seq SINGLE
GSM4101707: 19153_T; Homo sapiens; RNA-Seq
Sample: SRS5456792
BioProject: PRJNA575018
BioSample: SAMN12875612
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19153
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205985 18729011 1554507913 772.43 YL-SP-19153-T-combined.fastq.gz, SRR10205985, SRR10205985.lite SRA
SRX6925946 SRP223759 RNA-Seq SINGLE
GSM4101708: 19153_N; Homo sapiens; RNA-Seq
Sample: SRS5456793
BioProject: PRJNA575018
BioSample: SAMN12875611
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19153
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205986 19908899 1652438617 824.44 YL-SP-19153-N-combined.fastq.gz, SRR10205986, SRR10205986.lite SRA
SRX6925947 SRP223759 RNA-Seq SINGLE
GSM4101709: 19093_T; Homo sapiens; RNA-Seq
Sample: SRS5456794
BioProject: PRJNA575018
BioSample: SAMN12875610
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19093
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205987 18975795 1574990985 783.18 YL-SP-19093-T-combined.fastq.gz, SRR10205987, SRR10205987.lite SRA
SRX6925948 SRP223759 RNA-Seq SINGLE
GSM4101710: 19093_N; Homo sapiens; RNA-Seq
Sample: SRS5456795
BioProject: PRJNA575018
BioSample: SAMN12875609
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19093
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205988 19643156 1630381948 809.12 YL-SP-19093-N-combined.fastq.gz, SRR10205988, SRR10205988.lite SRA
SRX6925949 SRP223759 RNA-Seq SINGLE
GSM4101711: 18912_T; Homo sapiens; RNA-Seq
Sample: SRS5456796
BioProject: PRJNA575018
BioSample: SAMN12875607
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18912
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205989 19401607 1610333381 797.39 YL-SP-18912-T-combined.fastq.gz, SRR10205989, SRR10205989.lite SRA
SRX6925950 SRP223759 RNA-Seq SINGLE
GSM4101712: 18912_N; Homo sapiens; RNA-Seq
Sample: SRS5456797
BioProject: PRJNA575018
BioSample: SAMN12875606
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18912
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205990 19249574 1597714642 796.87 YL-SP-18912-N-combined.fastq.gz, SRR10205990, SRR10205990.lite SRA
SRX6925951 SRP223759 RNA-Seq SINGLE
GSM4101713: 19144_T; Homo sapiens; RNA-Seq
Sample: SRS5456798
BioProject: PRJNA575018
BioSample: SAMN12875605
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19144
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205991 20063223 1665247509 824.34 YL-SP-19144-T-combined.fastq.gz, SRR10205991, SRR10205991.lite SRA
SRX6925952 SRP223759 RNA-Seq SINGLE
GSM4101714: 19144_N; Homo sapiens; RNA-Seq
Sample: SRS5456799
BioProject: PRJNA575018
BioSample: SAMN12875604
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19144
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205992 20316658 1686282614 836.12 YL-SP-19144-N-combined.fastq.gz, SRR10205992, SRR10205992.lite SRA
SRX6925953 SRP223759 RNA-Seq SINGLE
GSM4101715: 19140_T; Homo sapiens; RNA-Seq
Sample: SRS5456800
BioProject: PRJNA575018
BioSample: SAMN12875603
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19140
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205993 18959678 1573653274 780.91 YL-SP-19140-T-combined.fastq.gz, SRR10205993, SRR10205993.lite SRA
SRX6925954 SRP223759 RNA-Seq SINGLE
GSM4101716: 19140_N; Homo sapiens; RNA-Seq
Sample: SRS5456801
BioProject: PRJNA575018
BioSample: SAMN12875602
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19140
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205994 20560018 1706481494 844.74 YL-SP-19140-N-combined.fastq.gz, SRR10205994, SRR10205994.lite SRA
SRX6925955 SRP223759 RNA-Seq SINGLE
GSM4101717: 19131_T; Homo sapiens; RNA-Seq
Sample: SRS5456802
BioProject: PRJNA575018
BioSample: SAMN12875601
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19131
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205995 19956644 1656401452 820.7 YL-SP-19131-T-combined.fastq.gz, SRR10205995, SRR10205995.lite SRA
SRX6925956 SRP223759 RNA-Seq SINGLE
GSM4101718: 19131_N; Homo sapiens; RNA-Seq
Sample: SRS5456803
BioProject: PRJNA575018
BioSample: SAMN12875671
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19131
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205996 20042325 1663512975 821.98 YL-SP-19131-N-combined.fastq.gz, SRR10205996, SRR10205996.lite SRA
SRX6925957 SRP223759 RNA-Seq SINGLE
GSM4101719: 19207_T; Homo sapiens; RNA-Seq
Sample: SRS5456804
BioProject: PRJNA575018
BioSample: SAMN12875670
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19207
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205997 19247212 1597518596 793.2 YL-SP-19207-T-combined.fastq.gz, SRR10205997, SRR10205997.lite SRA
SRX6925958 SRP223759 RNA-Seq SINGLE
GSM4101648: 18499_T; Homo sapiens; RNA-Seq
Sample: SRS5456805
BioProject: PRJNA575018
BioSample: SAMN12875564
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18499
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205926 17035318 1413931394 693.32 YL-SP-18499-T-combined.fastq.gz, SRR10205926, SRR10205926.lite SRA
SRX6925959 SRP223759 RNA-Seq SINGLE
GSM4101649: 18501_N; Homo sapiens; RNA-Seq
Sample: SRS5456806
BioProject: PRJNA575018
BioSample: SAMN12875563
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18501
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205927 18267778 1516225574 745.86 YL-SP-18501-N-combined.fastq.gz, SRR10205927, SRR10205927.lite SRA
SRX6925960 SRP223759 RNA-Seq SINGLE
GSM4101650: 18501_T; Homo sapiens; RNA-Seq
Sample: SRS5456807
BioProject: PRJNA575018
BioSample: SAMN12875562
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18501
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205928 18478979 1533755257 754.97 YL-SP-18501-T-combined.fastq.gz, SRR10205928, SRR10205928.lite SRA
SRX6925961 SRP223759 RNA-Seq SINGLE
GSM4101651: 18505_N; Homo sapiens; RNA-Seq
Sample: SRS5456808
BioProject: PRJNA575018
BioSample: SAMN12875561
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18505
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205929 16611619 1378764377 677.5 YL-SP-18505-N-combined.fastq.gz, SRR10205929, SRR10205929.lite SRA
SRX6925962 SRP223759 RNA-Seq SINGLE
GSM4101652: 18505_T; Homo sapiens; RNA-Seq
Sample: SRS5456809
BioProject: PRJNA575018
BioSample: SAMN12875560
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18505
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205930 14515719 1204804677 589.65 SRR10205930, SRR10205930.lite, YL-SP-18505-T-combined.fastq.gz SRA
SRX6925963 SRP223759 RNA-Seq SINGLE
GSM4101653: 18508_N; Homo sapiens; RNA-Seq
Sample: SRS5456810
BioProject: PRJNA575018
BioSample: SAMN12875559
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18508
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205931 15342432 1273421856 626.23 YL-SP-18508-N-combined.fastq.gz, SRR10205931, SRR10205931.lite SRA
SRX6925964 SRP223759 RNA-Seq SINGLE
GSM4101654: 18508_T; Homo sapiens; RNA-Seq
Sample: SRS5456811
BioProject: PRJNA575018
BioSample: SAMN12875558
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18508
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205932 15949984 1323848672 652.35 YL-SP-18508-T-combined.fastq.gz, SRR10205932, SRR10205932.lite SRA
SRX6925965 SRP223759 RNA-Seq SINGLE
GSM4101655: 18853_N; Homo sapiens; RNA-Seq
Sample: SRS5456812
BioProject: PRJNA575018
BioSample: SAMN12875557
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18853
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205933 15557696 1291288768 632.22 SRR10205933, SRR10205933.lite, YL-SP-18853-N-combined.fastq.gz SRA
SRX6925966 SRP223759 RNA-Seq SINGLE
GSM4101656: 18853_T; Homo sapiens; RNA-Seq
Sample: SRS5456813
BioProject: PRJNA575018
BioSample: SAMN12875556
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18853
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205934 22724250 1886112750 928.67 YL-SP-18853-T-combined.fastq.gz, SRR10205934, SRR10205934.lite SRA
SRX6925967 SRP223759 RNA-Seq SINGLE
GSM4101657: 18870_N; Homo sapiens; RNA-Seq
Sample: SRS5456814
BioProject: PRJNA575018
BioSample: SAMN12875555
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18870
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205935 17962471 1490885093 735.19 YL-SP-18870-N-combined.fastq.gz, SRR10205935, SRR10205935.lite SRA
SRX6925968 SRP223759 RNA-Seq SINGLE
GSM4101658: 18870_T; Homo sapiens; RNA-Seq
Sample: SRS5456815
BioProject: PRJNA575018
BioSample: SAMN12875554
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 18870
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205936 17348909 1439959447 709.92 YL-SP-18870-T-combined.fastq.gz, SRR10205936, SRR10205936.lite SRA
SRX6925969 SRP223759 RNA-Seq SINGLE
GSM4101659: 19141_N; Homo sapiens; RNA-Seq
Sample: SRS5456816
BioProject: PRJNA575018
BioSample: SAMN12875553
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19141
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205937 18631412 1546407196 761.41 YL-SP-19141-N-combined.fastq.gz, SRR10205937, SRR10205937.lite SRA
SRX6925970 SRP223759 RNA-Seq SINGLE
GSM4101660: 19141_T; Homo sapiens; RNA-Seq
Sample: SRS5456817
BioProject: PRJNA575018
BioSample: SAMN12875552
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19141
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205938 16114416 1337496528 660.02 YL-SP-19141-T-combined.fastq.gz, SRR10205938, SRR10205938.lite SRA
SRX6925971 SRP223759 RNA-Seq SINGLE
GSM4101661: 19193_N; Homo sapiens; RNA-Seq
Sample: SRS5456818
BioProject: PRJNA575018
BioSample: SAMN12875600
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19193
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205939 17489989 1451669087 717.9 YL-SP-19193-N-combined.fastq.gz, SRR10205939, SRR10205939.lite SRA
SRX6925972 SRP223759 RNA-Seq SINGLE
GSM4101662: 19193_T; Homo sapiens; RNA-Seq
Sample: SRS5456819
BioProject: PRJNA575018
BioSample: SAMN12875599
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19193
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205940 17136702 1422346266 700.68 YL-SP-19193-T-combined.fastq.gz, SRR10205940, SRR10205940.lite SRA
SRX6925973 SRP223759 RNA-Seq SINGLE
GSM4101663: 19209_N; Homo sapiens; RNA-Seq
Sample: SRS5456820
BioProject: PRJNA575018
BioSample: SAMN12875598
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19209
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205941 16875442 1400661686 689.97 YL-SP-19209-N-combined.fastq.gz, SRR10205941, SRR10205941.lite SRA
SRX6925974 SRP223759 RNA-Seq SINGLE
GSM4101664: 19209_T; Homo sapiens; RNA-Seq
Sample: SRS5456821
BioProject: PRJNA575018
BioSample: SAMN12875597
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19209
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205942 18951140 1572944620 772.92 YL-SP-19209-T-combined.fastq.gz, SRR10205942, SRR10205942.lite SRA
SRX6925975 SRP223759 RNA-Seq SINGLE
GSM4101665: 19223_N; Homo sapiens; RNA-Seq
Sample: SRS5456822
BioProject: PRJNA575018
BioSample: SAMN12875596
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19223
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205943 17961244 1490783252 732.46 YL-SP-19223-N-combined.fastq.gz, SRR10205943, SRR10205943.lite SRA
SRX6925976 SRP223759 RNA-Seq SINGLE
GSM4101666: 19223_T; Homo sapiens; RNA-Seq
Sample: SRS5456823
BioProject: PRJNA575018
BioSample: SAMN12875595
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19223
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205944 15382578 1276753974 628.69 YL-SP-19223-T-combined.fastq.gz, SRR10205944, SRR10205944.lite SRA
SRX6925977 SRP223759 RNA-Seq SINGLE
GSM4101667: 19225_N; Homo sapiens; RNA-Seq
Sample: SRS5456824
BioProject: PRJNA575018
BioSample: SAMN12875594
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19225
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205945 21159011 1756197913 862.71 YL-SP-19225-N-combined.fastq.gz, SRR10205945, SRR10205945.lite SRA
SRX6925978 SRP223759 RNA-Seq SINGLE
GSM4101668: 19225_T; Homo sapiens; RNA-Seq
Sample: SRS5456825
BioProject: PRJNA575018
BioSample: SAMN12875593
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19225
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205946 15783256 1310010248 646.26 YL-SP-19225-T-combined.fastq.gz, SRR10205946, SRR10205946.lite SRA
SRX6925979 SRP223759 RNA-Seq SINGLE
GSM4101669: 19238_N; Homo sapiens; RNA-Seq
Sample: SRS5456826
BioProject: PRJNA575018
BioSample: SAMN12875592
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19238
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205947 17167985 1424942755 699.1 YL-SP-19238-N-combined.fastq.gz, SRR10205947, SRR10205947.lite SRA
SRX6925980 SRP223759 RNA-Seq SINGLE
GSM4101670: 19238_T; Homo sapiens; RNA-Seq
Sample: SRS5456827
BioProject: PRJNA575018
BioSample: SAMN12875591
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19238
cell type: Imortalized Lymphocyte
Sex: female
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205948 16886466 1401576678 687.76 YL-SP-19238-T-combined.fastq.gz, SRR10205948, SRR10205948.lite SRA
SRX6925981 SRP223759 RNA-Seq SINGLE
GSM4101671: 19239_N; Homo sapiens; RNA-Seq
Sample: SRS5456828
BioProject: PRJNA575018
BioSample: SAMN12875590
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Sample attributes
source_name: Imortalized Lymphoblastoid cell line
individual: 19239
cell type: Imortalized Lymphocyte
Sex: male
Original files (1)
Imortalized Lymphoblastoid cell line
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR10205949 18569815 1541294645 759.11 YL-SP-19239-N-combined.fastq.gz, SRR10205949, SRR10205949.lite SRA

Linked Publications (1)

Skipper analysis of eCLIP datasets enables sensitive detection of constrained translation factor binding sites.
Cell genomics · 2023

Data Files (104)

Accession File Name Stored Type Output Type Mapping Assembly Size Download
— SRR10205930 RNA-Seq 589.6 MB link
— SRR10205933 RNA-Seq 632.2 MB link
— SRR10205961 RNA-Seq 809.4 MB link
— YL-SP-18486-N-combined.fastq.gz RNA-Seq 660.2 MB link
— YL-SP-18486-T-combined.fastq.gz RNA-Seq 638.6 MB link
— YL-SP-18498_N-combined.fastq.gz RNA-Seq 1.1 GB link
— YL-SP-18498_T-combined.fastq.gz RNA-Seq 1.2 GB link
— YL-SP-18499-N-combined.fastq.gz RNA-Seq 744.5 MB link
— YL-SP-18499-T-combined.fastq.gz RNA-Seq 693.3 MB link
— YL-SP-18501-N-combined.fastq.gz RNA-Seq 745.9 MB link
— YL-SP-18501-T-combined.fastq.gz RNA-Seq 755.0 MB link
— YL-SP-18502_N-combined.fastq.gz RNA-Seq 1.2 GB link
— YL-SP-18502_T-combined.fastq.gz RNA-Seq 1.1 GB link
— YL-SP-18504_N-combined.fastq.gz RNA-Seq 1.1 GB link
— YL-SP-18504_T-combined.fastq.gz RNA-Seq 1.2 GB link
— YL-SP-18505-N-combined.fastq.gz RNA-Seq 677.5 MB link
— YL-SP-18508-N-combined.fastq.gz RNA-Seq 626.2 MB link
— YL-SP-18508-T-combined.fastq.gz RNA-Seq 652.3 MB link
— YL-SP-18510_N-combined.fastq.gz RNA-Seq 1.1 GB link
— YL-SP-18510_T-combined.fastq.gz RNA-Seq 1.1 GB link
— YL-SP-18511-N-combined.fastq.gz RNA-Seq 797.2 MB link
— YL-SP-18511-T-combined.fastq.gz RNA-Seq 777.5 MB link
— YL-SP-18516_N-combined.fastq.gz RNA-Seq 1.0 GB link
— YL-SP-18516_T-combined.fastq.gz RNA-Seq 1.3 GB link
— YL-SP-18519-N-combined.fastq.gz RNA-Seq 792.2 MB link
— YL-SP-18519-T-combined.fastq.gz RNA-Seq 760.6 MB link
— YL-SP-18520-N-combined.fastq.gz RNA-Seq 777.6 MB link
— YL-SP-18520-T-combined.fastq.gz RNA-Seq 835.9 MB link
— YL-SP-18522_N-combined.fastq.gz RNA-Seq 1022.6 MB link
— YL-SP-18522_T-combined.fastq.gz RNA-Seq 1.1 GB link
— YL-SP-18852_N-combined.fastq.gz RNA-Seq 1.1 GB link
— YL-SP-18852_T-combined.fastq.gz RNA-Seq 1.2 GB link
— YL-SP-18853-T-combined.fastq.gz RNA-Seq 928.7 MB link
— YL-SP-18855_N-combined.fastq.gz RNA-Seq 746.3 MB link
— YL-SP-18855_T-combined.fastq.gz RNA-Seq 1.1 GB link
— YL-SP-18856_N-combined.fastq.gz RNA-Seq 1.2 GB link
— YL-SP-18856_T-combined.fastq.gz RNA-Seq 1.0 GB link
— YL-SP-18858-N-combined.fastq.gz RNA-Seq 747.4 MB link
— YL-SP-18861-N-combined.fastq.gz RNA-Seq 674.6 MB link
— YL-SP-18861-T-combined.fastq.gz RNA-Seq 942.5 MB link
— YL-SP-18862_N-combined.fastq.gz RNA-Seq 1.2 GB link
— YL-SP-18862_T-combined.fastq.gz RNA-Seq 1.2 GB link
— YL-SP-18870-N-combined.fastq.gz RNA-Seq 735.2 MB link
— YL-SP-18870-T-combined.fastq.gz RNA-Seq 709.9 MB link
— YL-SP-18907_N-combined.fastq.gz RNA-Seq 1.1 GB link
— YL-SP-18907_T-combined.fastq.gz RNA-Seq 1.1 GB link
— YL-SP-18909-N-combined.fastq.gz RNA-Seq 303.1 MB link
— YL-SP-18909-T-combined.fastq.gz RNA-Seq 937.8 MB link
— YL-SP-18912-N-combined.fastq.gz RNA-Seq 796.9 MB link
— YL-SP-18912-T-combined.fastq.gz RNA-Seq 797.4 MB link
— YL-SP-18913_N-combined.fastq.gz RNA-Seq 1.1 GB link
— YL-SP-18913_T-combined.fastq.gz RNA-Seq 1.1 GB link
— YL-SP-18916-N-combined.fastq.gz RNA-Seq 752.4 MB link
— YL-SP-18916-T-combined.fastq.gz RNA-Seq 771.9 MB link
— YL-SP-19092-N-combined.fastq.gz RNA-Seq 793.1 MB link
— YL-SP-19092-T-combined.fastq.gz RNA-Seq 823.1 MB link
— YL-SP-19093-N-combined.fastq.gz RNA-Seq 809.1 MB link
— YL-SP-19093-T-combined.fastq.gz RNA-Seq 783.2 MB link
— YL-SP-19101_N-combined.fastq.gz RNA-Seq 1.2 GB link
— YL-SP-19101_T-combined.fastq.gz RNA-Seq 1.2 GB link
— YL-SP-19119-N-combined.fastq.gz RNA-Seq 785.4 MB link
— YL-SP-19119-T-combined.fastq.gz RNA-Seq 822.6 MB link
— YL-SP-19130-N-combined.fastq.gz RNA-Seq 737.1 MB link
— YL-SP-19130-T-combined.fastq.gz RNA-Seq 789.8 MB link
— YL-SP-19131-N-combined.fastq.gz RNA-Seq 822.0 MB link
— YL-SP-19131-T-combined.fastq.gz RNA-Seq 820.7 MB link
— YL-SP-19137-N-combined.fastq.gz RNA-Seq 766.7 MB link
— YL-SP-19137-T-combined.fastq.gz RNA-Seq 772.0 MB link
— YL-SP-19138_N-combined.fastq.gz RNA-Seq 1.0 GB link
— YL-SP-19138_T-combined.fastq.gz RNA-Seq 1.2 GB link
— YL-SP-19140-N-combined.fastq.gz RNA-Seq 844.7 MB link
— YL-SP-19140-T-combined.fastq.gz RNA-Seq 780.9 MB link
— YL-SP-19141-N-combined.fastq.gz RNA-Seq 761.4 MB link
— YL-SP-19141-T-combined.fastq.gz RNA-Seq 660.0 MB link
— YL-SP-19144-N-combined.fastq.gz RNA-Seq 836.1 MB link
— YL-SP-19144-T-combined.fastq.gz RNA-Seq 824.3 MB link
— YL-SP-19152-N-combined.fastq.gz RNA-Seq 1.3 GB link
— YL-SP-19152-T-combined.fastq.gz RNA-Seq 754.8 MB link
— YL-SP-19153-N-combined.fastq.gz RNA-Seq 824.4 MB link
— YL-SP-19153-T-combined.fastq.gz RNA-Seq 772.4 MB link
— YL-SP-19160-N-combined.fastq.gz RNA-Seq 741.4 MB link
— YL-SP-19160-T-combined.fastq.gz RNA-Seq 308.1 MB link
— YL-SP-19171-N-combined.fastq.gz RNA-Seq 783.8 MB link
— YL-SP-19171-T-combined.fastq.gz RNA-Seq 778.7 MB link
— YL-SP-19193-N-combined.fastq.gz RNA-Seq 717.9 MB link
— YL-SP-19193-T-combined.fastq.gz RNA-Seq 700.7 MB link
— YL-SP-19200-N-combined.fastq.gz RNA-Seq 829.0 MB link
— YL-SP-19200-T-combined.fastq.gz RNA-Seq 810.9 MB link
— YL-SP-19207-N-combined.fastq.gz RNA-Seq 854.9 MB link
— YL-SP-19207-T-combined.fastq.gz RNA-Seq 793.2 MB link
— YL-SP-19209-N-combined.fastq.gz RNA-Seq 690.0 MB link
— YL-SP-19209-T-combined.fastq.gz RNA-Seq 772.9 MB link
— YL-SP-19210-N-combined.fastq.gz RNA-Seq 767.3 MB link
— YL-SP-19210-T-combined.fastq.gz RNA-Seq 798.6 MB link
— YL-SP-19223-N-combined.fastq.gz RNA-Seq 732.5 MB link
— YL-SP-19223-T-combined.fastq.gz RNA-Seq 628.7 MB link
— YL-SP-19225-N-combined.fastq.gz RNA-Seq 862.7 MB link
— YL-SP-19225-T-combined.fastq.gz RNA-Seq 646.3 MB link
— YL-SP-19238-N-combined.fastq.gz RNA-Seq 699.1 MB link
— YL-SP-19238-T-combined.fastq.gz RNA-Seq 687.8 MB link
— YL-SP-19239-N-combined.fastq.gz RNA-Seq 759.1 MB link
— YL-SP-19239-T-combined.fastq.gz RNA-Seq 675.6 MB link
— YL-SP-19257-N-combined.fastq.gz RNA-Seq 659.9 MB link
— YL-SP-19257-T-combined.fastq.gz RNA-Seq 704.9 MB link