GSE14555

GSE GEO

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Divergent Transcriptomic Responses to Aryl Hydrocarbon Receptor Agonists Between Rat and Human Primary Hepatocytes

Organism: Rattus norvegicus

Platform: GPL85

Samples: 66

Experiment Types:

Expression profiling by array

Submitted: Jan 23 2009

Last Updated: Aug 10 2018

Status: Public on Aug 19 2009

Contact: Erik,A,Carlson (General Electric)

SuperSeries of: GSE14553 SuperSeries of: GSE14554 BioProject: https://www.ncbi.nlm.nih.gov/bioproject/PRJNA111733

This SuperSeries is composed of the SubSeries listed below.

Refer to individual Series

Processing steps for GSE14555

All .CEL files (within each species) were pre-processed using the default settings of the justGCRMA function of gcrma package version 2.8.0 (Wu et al., 2004) as implemented in R.
This function background corrects perfect-match probe intensities using probe sequence information, log2-transforms the data, quantile normalizes across the arrays, and summarizes probe intensities via the robust multiarray average (RMA) method (Irizarry et al., 2003) to give an intensity value (log2 scale) for each probe set.

GSE14555_RAW.tar Download

GEO Samples (66)

GSM364049 GSM364050 GSM364051 GSM364052 GSM364053 GSM364054 GSM364055 GSM364056 GSM364057 GSM364058 GSM364059 GSM364060 GSM364061 GSM364062 GSM364063 GSM364064 GSM364065 GSM364066 GSM364067 GSM364068 GSM364069 GSM364070 GSM364071 GSM364072 GSM364073 GSM364074 GSM364075 GSM364076 GSM364077 GSM364078 GSM364079 GSM364080 GSM364081 GSM364082 GSM364083 GSM364084 GSM364085 GSM364086 GSM364087 GSM364088 GSM364089 GSM364090 GSM364091 GSM364092 GSM364093 GSM364094 GSM364095 GSM364096 GSM364097 GSM364098 GSM364099 GSM364100 GSM364101 GSM364102 GSM364103 GSM364104 GSM364105 GSM364106 GSM364107 GSM364108 GSM364109 GSM364110 GSM364111 GSM364112 GSM364113 GSM364114

PubMed citation (PMID 19692669)

Molecular cell · 2020