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GSE59288

GSE GEO
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Disruption of human-specific synaptogenesis program in autism [RNA-seq]

Organism: 9598
Platform: GPL11154
Samples: 73
Experiment Types:
Expression profiling by high throughput sequencing
Submitted: Jul 10 2014
Last Updated: May 15 2019
Status: Public on Aug 12 2016
Contact: Xiling,,Liu (Partner Institute for Computational Biology)

Relations

BioProject: https://www.ncbi.nlm.nih.gov/bioproject/PRJNA254971 SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRP044228

Summary

To test the connection between the molecular mechanisms underlying autistic disorder and human cognitive evolution, we analyzed the gene expression changes taking place during prefrontal cortex development in autism patients and healthy controls, as well as non-human primates. We found the genes with expression changes in autism are significantly overlapped with genes showing human-specific developmental profile. A major pattern of the overlapped genes reflects the aberrant acceleration of synaptogenesis and synaptic maturation followed by premature synaptic pruning in the prefrontal cortex of autism patients. This pattern involves the same developmental program that controls human-specific extension of cortical synaptogenesis in healthy individuals. Taken together, these findings shed light on the molecular mechanisms underlying autistic phenotype and provide potential targets for clinical intervention.

Overall Design

Compare the gene expression change in autism and the gene expression specificly changed in human.

Analysis (3 steps)

View Data Processing
Processing steps for GSE59288
  1. The raw sequencing reads were mapped to each species’ reference genome and the splice junctions using Bowtie, allowing up to three mismatches.
  2. Only uniquely mapped reads were used to calculate the gene expression levels.
  3. Gene expression levels were calculated using the read coverage normalized by gene length and the total number of reads mapped to genes in a sample.

Supplementary Files (1)

GSE59288_exp_mRNA.txt.gz Download
GEO Samples (73)
GSM1432812 GSM1432813 GSM1432814 GSM1432815 GSM1432816 GSM1432817 GSM1432818 GSM1432819 GSM1432820 GSM1432821 GSM1432822 GSM1432823 GSM1432824 GSM1432825 GSM1432826 GSM1432827 GSM1432828 GSM1432829 GSM1432830 GSM1432831 GSM1432832 GSM1432833 GSM1432834 GSM1432835 GSM1432836 GSM1432837 GSM1432838 GSM1432839 GSM1432840 GSM1432841 GSM1432842 GSM1432843 GSM1432844 GSM1432845 GSM1432846 GSM1432847 GSM1432848 GSM1432849 GSM1432850 GSM1432851 GSM1432852 GSM1432853 GSM1432854 GSM1432855 GSM1432856 GSM1432857 GSM1432858 GSM1432859 GSM1432860 GSM1432861 GSM1432862 GSM1432863 GSM1432864 GSM1432865 GSM1432866 GSM1432867 GSM1432868 GSM1432869 GSM1432870 GSM1432872 GSM1432874 GSM1432878 GSM1432880 GSM1432883 GSM1432886 GSM1432887 GSM1432888 GSM1432889 GSM1432890 GSM1432891 GSM1432892 GSM1432893 GSM1432894

Dataset Citations (1)

PubMed citation (PMID 27685936)

SRA Experiments (73) and Runs (73)

Total: 45580 MB
SRX648827 SRP044228 RNA-Seq SINGLE
GSM1432812: autism-PFC-730d [aut1]; Homo sapiens; RNA-Seq
Sample: SRS656135
BioProject: PRJNA254971
BioSample: SAMN02906827
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: male
age: 730 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510124 10341810 1034181000 691.61 SRR1510124, SRR1510124.sralite, aut1.fastq.gz SRA
SRX648828 SRP044228 RNA-Seq SINGLE
GSM1432813: autism-PFC-1625d [aut2]; Homo sapiens; RNA-Seq
Sample: SRS656136
BioProject: PRJNA254971
BioSample: SAMN02906828
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: female
age: 1625 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510125 11251222 1125122200 747.92 SRR1510125, SRR1510125.sralite, aut2.fastq.gz SRA
SRX648829 SRP044228 RNA-Seq SINGLE
GSM1432814: autism-PFC-1825d [aut3]; Homo sapiens; RNA-Seq
Sample: SRS656137
BioProject: PRJNA254971
BioSample: SAMN02906830
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: male
age: 1825 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510126 9365139 936513900 624.73 SRR1510126, SRR1510126.sralite, aut3.fastq.gz SRA
SRX648830 SRP044228 RNA-Seq SINGLE
GSM1432815: autism-PFC-1825d [aut4]; Homo sapiens; RNA-Seq
Sample: SRS656139
BioProject: PRJNA254971
BioSample: SAMN02906831
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: female
age: 1825 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510127 10129699 1012969900 671.91 SRR1510127, SRR1510127.sralite, aut4.fastq.gz SRA
SRX648831 SRP044228 RNA-Seq SINGLE
GSM1432816: autism-PFC-2045d [aut5]; Homo sapiens; RNA-Seq
Sample: SRS656138
BioProject: PRJNA254971
BioSample: SAMN02906832
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: male
age: 2045 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510128 11576594 1157659400 764.74 aut5.fastq.gz, SRR1510128, SRR1510128.sralite SRA
SRX648832 SRP044228 RNA-Seq SINGLE
GSM1432817: autism-PFC-2610d [aut6]; Homo sapiens; RNA-Seq
Sample: SRS656140
BioProject: PRJNA254971
BioSample: SAMN02906833
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: male
age: 2610 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510129 5650860 565086000 375.28 SRR1510129, SRR1510129.sralite, aut6.fastq.gz SRA
SRX648833 SRP044228 RNA-Seq SINGLE
GSM1432818: autism-PFC-2838d [aut7]; Homo sapiens; RNA-Seq
Sample: SRS656141
BioProject: PRJNA254971
BioSample: SAMN02906834
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: female
age: 2838 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510130 9821150 982115000 649.12 aut7.fastq.gz, SRR1510130, SRR1510130.sralite SRA
SRX648834 SRP044228 RNA-Seq SINGLE
GSM1432819: autism-PFC-2920d [aut8]; Homo sapiens; RNA-Seq
Sample: SRS656142
BioProject: PRJNA254971
BioSample: SAMN02906829
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: male
age: 2920 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510131 10567561 1056756100 705.35 SRR1510131, SRR1510131.sralite, aut8.fastq.gz SRA
SRX648835 SRP044228 RNA-Seq SINGLE
GSM1432820: autism-PFC-3224d [aut9]; Homo sapiens; RNA-Seq
Sample: SRS656143
BioProject: PRJNA254971
BioSample: SAMN02906835
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: male
age: 3224 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510132 9404085 940408500 631.34 SRR1510132, SRR1510132.sralite, aut9.fastq.gz SRA
SRX648836 SRP044228 RNA-Seq SINGLE
GSM1432821: autism-PFC-3285d [aut10]; Homo sapiens; RNA-Seq
Sample: SRS656144
BioProject: PRJNA254971
BioSample: SAMN02906836
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: male
age: 3285 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510133 9581455 958145500 633.04 aut10.fastq.gz, SRR1510133, SRR1510133.sralite SRA
SRX648837 SRP044228 RNA-Seq SINGLE
GSM1432822: autism-PFC-3650d [aut11]; Homo sapiens; RNA-Seq
Sample: SRS656145
BioProject: PRJNA254971
BioSample: SAMN02906837
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: male
age: 3650 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510134 10093305 1009330500 659.16 SRR1510134, SRR1510134.sralite, aut11.fastq.gz SRA
SRX648838 SRP044228 RNA-Seq SINGLE
GSM1432823: autism-PFC-3650d [aut12]; Homo sapiens; RNA-Seq
Sample: SRS656146
BioProject: PRJNA254971
BioSample: SAMN02906838
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: female
age: 3650 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510135 9505124 950512400 628.76 SRR1510135, SRR1510135.sralite, aut12.fastq.gz SRA
SRX648839 SRP044228 RNA-Seq SINGLE
GSM1432824: autism-PFC-4015d [aut13]; Homo sapiens; RNA-Seq
Sample: SRS656147
BioProject: PRJNA254971
BioSample: SAMN02906839
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: female
age: 4015 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510136 8131743 813174300 544.36 SRR1510136, SRR1510136.sralite, aut13.fastq.gz SRA
SRX648840 SRP044228 RNA-Seq SINGLE
GSM1432825: autism-PFC-4015d [aut14]; Homo sapiens; RNA-Seq
Sample: SRS656148
BioProject: PRJNA254971
BioSample: SAMN02906750
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: male
age: 4015 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510137 8532516 853251600 564.63 aut14.fastq.gz, SRR1510137, SRR1510137.sralite SRA
SRX648841 SRP044228 RNA-Seq SINGLE
GSM1432826: autism-PFC-5236d [aut15]; Homo sapiens; RNA-Seq
Sample: SRS656149
BioProject: PRJNA254971
BioSample: SAMN02906751
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: male
age: 5236 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510138 9039432 903943200 592.89 SRR1510138, SRR1510138.sralite, aut15.fastq.gz SRA
SRX648842 SRP044228 RNA-Seq SINGLE
GSM1432827: autism-PFC-5475d [aut16]; Homo sapiens; RNA-Seq
Sample: SRS656150
BioProject: PRJNA254971
BioSample: SAMN02906752
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: male
age: 5475 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510139 7155438 715543800 481.58 SRR1510139, SRR1510139.sralite, aut16.fastq.gz SRA
SRX648843 SRP044228 RNA-Seq SINGLE
GSM1432828: autism-PFC-6570d [aut17]; Homo sapiens; RNA-Seq
Sample: SRS656151
BioProject: PRJNA254971
BioSample: SAMN02906753
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: female
age: 6570 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510140 8502885 850288500 511.05 SRR1510140, SRR1510140.sralite, aut17.fastq.gz SRA
SRX648844 SRP044228 RNA-Seq SINGLE
GSM1432829: autism-PFC-6935d [aut18]; Homo sapiens; RNA-Seq
Sample: SRS656152
BioProject: PRJNA254971
BioSample: SAMN02906754
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: male
age: 6935 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510141 8858576 885857600 599.18 aut18.fastq.gz, SRR1510141, SRR1510141.sralite SRA
SRX648845 SRP044228 RNA-Seq SINGLE
GSM1432830: autism-PFC-7300d [aut19]; Homo sapiens; RNA-Seq
Sample: SRS656154
BioProject: PRJNA254971
BioSample: SAMN02906755
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: male
age: 7300 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510142 11519086 1151908600 765.09 aut19.fastq.gz, SRR1510142, SRR1510142.sralite SRA
SRX648846 SRP044228 RNA-Seq SINGLE
GSM1432831: autism-PFC-7577d [aut20]; Homo sapiens; RNA-Seq
Sample: SRS656153
BioProject: PRJNA254971
BioSample: SAMN02906756
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: female
age: 7577 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510143 10726057 1072605700 713.27 aut20.fastq.gz, SRR1510143, SRR1510143.sralite SRA
SRX648847 SRP044228 RNA-Seq SINGLE
GSM1432832: autism-PFC-8030d [aut21]; Homo sapiens; RNA-Seq
Sample: SRS656155
BioProject: PRJNA254971
BioSample: SAMN02906757
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: male
age: 8030 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510144 7847515 784751500 476.28 aut21.fastq.gz, SRR1510144, SRR1510144.sralite SRA
SRX648848 SRP044228 RNA-Seq SINGLE
GSM1432833: autism-PFC-8760d [aut22]; Homo sapiens; RNA-Seq
Sample: SRS656156
BioProject: PRJNA254971
BioSample: SAMN02906758
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: male
age: 8760 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510145 9211131 921113100 607.67 aut22.fastq.gz, SRR1510145, SRR1510145.sralite SRA
SRX648849 SRP044228 RNA-Seq SINGLE
GSM1432834: autism-PFC-9855d [aut23]; Homo sapiens; RNA-Seq
Sample: SRS656157
BioProject: PRJNA254971
BioSample: SAMN02906759
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: male
age: 9855 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510146 10929117 1092911700 731.01 aut23.fastq.gz, SRR1510146, SRR1510146.sralite SRA
SRX648850 SRP044228 RNA-Seq SINGLE
GSM1432835: autism-PFC-10585d [aut24]; Homo sapiens; RNA-Seq
Sample: SRS656158
BioProject: PRJNA254971
BioSample: SAMN02906760
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: male
age: 10585 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510147 8898070 889807000 591.08 SRR1510147, SRR1510147.sralite, aut24.fastq.gz SRA
SRX648851 SRP044228 RNA-Seq SINGLE
GSM1432836: autism-PFC-10585d [aut25]; Homo sapiens; RNA-Seq
Sample: SRS656159
BioProject: PRJNA254971
BioSample: SAMN02906761
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: female
age: 10585 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510148 9567591 956759100 633.14 aut25.fastq.gz, SRR1510148, SRR1510148.sralite SRA
SRX648852 SRP044228 RNA-Seq SINGLE
GSM1432837: autism-PFC-10950d [aut26]; Homo sapiens; RNA-Seq
Sample: SRS656160
BioProject: PRJNA254971
BioSample: SAMN02906762
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: male
age: 10950 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510149 10198139 1019813900 679.45 aut26.fastq.gz, SRR1510149, SRR1510149.sralite SRA
SRX648853 SRP044228 RNA-Seq SINGLE
GSM1432838: autism-PFC-10950d [aut27]; Homo sapiens; RNA-Seq
Sample: SRS656161
BioProject: PRJNA254971
BioSample: SAMN02906763
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: male
age: 10950 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510150 8076204 807620400 534.69 aut27.fastq.gz, SRR1510150, SRR1510150.sralite SRA
SRX648854 SRP044228 RNA-Seq SINGLE
GSM1432839: autism-PFC-10950d [aut28]; Homo sapiens; RNA-Seq
Sample: SRS656166
BioProject: PRJNA254971
BioSample: SAMN02906764
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: male
age: 10950 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510151 10179488 1017948800 681.21 SRR1510151, SRR1510151.sralite, aut28.fastq.gz SRA
SRX648855 SRP044228 RNA-Seq SINGLE
GSM1432840: autism-PFC-14235d [aut29]; Homo sapiens; RNA-Seq
Sample: SRS656162
BioProject: PRJNA254971
BioSample: SAMN02906765
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: male
age: 14235 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510152 9448086 944808600 566.47 aut29.fastq.gz, SRR1510152, SRR1510152.sralite SRA
SRX648856 SRP044228 RNA-Seq SINGLE
GSM1432841: autism-PFC-14235d [aut30]; Homo sapiens; RNA-Seq
Sample: SRS656163
BioProject: PRJNA254971
BioSample: SAMN02906766
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: male
age: 14235 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510153 7923118 792311800 536.38 SRR1510153, SRR1510153.sralite, aut30.fastq.gz SRA
SRX648857 SRP044228 RNA-Seq SINGLE
GSM1432842: autism-PFC-17885d [aut31]; Homo sapiens; RNA-Seq
Sample: SRS656164
BioProject: PRJNA254971
BioSample: SAMN02906767
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: female
age: 17885 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510154 10662256 1066225600 705.1 SRR1510154, SRR1510154.sralite, aut31.fastq.gz SRA
SRX648858 SRP044228 RNA-Seq SINGLE
GSM1432843: autism-PFC-18250d [aut32]; Homo sapiens; RNA-Seq
Sample: SRS656167
BioProject: PRJNA254971
BioSample: SAMN02906768
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: male
age: 18250 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510155 8171231 817123100 540.63 SRR1510155, SRR1510155.sralite, aut32.fastq.gz SRA
SRX648859 SRP044228 RNA-Seq SINGLE
GSM1432844: autism-PFC-18980d [aut33]; Homo sapiens; RNA-Seq
Sample: SRS656165
BioProject: PRJNA254971
BioSample: SAMN02906769
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: female
age: 18980 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510156 10811206 1081120600 719.57 aut33.fastq.gz, SRR1510156, SRR1510156.sralite SRA
SRX648860 SRP044228 RNA-Seq SINGLE
GSM1432845: autism-PFC-21900d [aut34]; Homo sapiens; RNA-Seq
Sample: SRS656169
BioProject: PRJNA254971
BioSample: SAMN02906770
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Homo sapiens
Sample attributes
source_name: dissected human post-mortem superior frontal gyrus
sample group: autistic patient
gender: male
age: 21900 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected human post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510157 8770747 877074700 581.31 SRR1510157, SRR1510157.sralite, aut34.fastq.gz SRA
SRX648861 SRP044228 RNA-Seq SINGLE
GSM1432846: chimpanzee-PFC-0d [ptr1]; Pan troglodytes; RNA-Seq
Sample: SRS656168
BioProject: PRJNA254971
BioSample: SAMN02906771
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: male
age: 0 day
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510158 8827503 882750300 589.55 SRR1510158, SRR1510158.sralite, ptr1.fastq.gz SRA
SRX648862 SRP044228 RNA-Seq SINGLE
GSM1432847: chimpanzee-PFC-1d [ptr2]; Pan troglodytes; RNA-Seq
Sample: SRS656170
BioProject: PRJNA254971
BioSample: SAMN02906773
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: female
age: 1 day
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510159 10521488 1052148800 693.16 SRR1510159, SRR1510159.sralite, ptr2.fastq.gz SRA
SRX648863 SRP044228 RNA-Seq SINGLE
GSM1432848: chimpanzee-PFC-7d [ptr3]; Pan troglodytes; RNA-Seq
Sample: SRS656171
BioProject: PRJNA254971
BioSample: SAMN02906774
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: female
age: 7 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510160 9989855 998985500 654.86 ptr3.fastq.gz, SRR1510160, SRR1510160.sralite SRA
SRX648864 SRP044228 RNA-Seq SINGLE
GSM1432849: chimpanzee-PFC-7d [ptr4]; Pan troglodytes; RNA-Seq
Sample: SRS656178
BioProject: PRJNA254971
BioSample: SAMN02906772
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: male
age: 7 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510161 8976485 897648500 585.21 ptr4.fastq.gz, SRR1510161, SRR1510161.sralite SRA
SRX648865 SRP044228 RNA-Seq SINGLE
GSM1432850: chimpanzee-PFC-8d [ptr5]; Pan troglodytes; RNA-Seq
Sample: SRS656172
BioProject: PRJNA254971
BioSample: SAMN02906775
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: male
age: 8 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510162 10713100 1071310000 709.23 SRR1510162, SRR1510162.sralite, ptr5.fastq.gz SRA
SRX648866 SRP044228 RNA-Seq SINGLE
GSM1432851: chimpanzee-PFC-32d [ptr6]; Pan troglodytes; RNA-Seq
Sample: SRS656173
BioProject: PRJNA254971
BioSample: SAMN02906776
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: female
age: 32 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510163 6987426 698742600 458.72 SRR1510163, SRR1510163.sralite, ptr6.fastq.gz SRA
SRX648867 SRP044228 RNA-Seq SINGLE
GSM1432852: chimpanzee-PFC-34d [ptr7]; Pan troglodytes; RNA-Seq
Sample: SRS656174
BioProject: PRJNA254971
BioSample: SAMN02906777
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: male
age: 34 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510164 11340002 1134000200 750.23 SRR1510164, SRR1510164.sralite, ptr7.fastq.gz SRA
SRX648868 SRP044228 RNA-Seq SINGLE
GSM1432853: chimpanzee-PFC-39d [ptr8]; Pan troglodytes; RNA-Seq
Sample: SRS656175
BioProject: PRJNA254971
BioSample: SAMN02906778
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: male
age: 39 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510165 8351209 835120900 499.97 SRR1510165, SRR1510165.sralite, ptr8.fastq.gz SRA
SRX648869 SRP044228 RNA-Seq SINGLE
GSM1432854: chimpanzee-PFC-45d [ptr9]; Pan troglodytes; RNA-Seq
Sample: SRS656176
BioProject: PRJNA254971
BioSample: SAMN02906779
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: female
age: 45 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510166 8029644 802964400 484.27 SRR1510166, SRR1510166.sralite, ptr9.fastq.gz SRA
SRX648870 SRP044228 RNA-Seq SINGLE
GSM1432855: chimpanzee-PFC-525d [ptr10]; Pan troglodytes; RNA-Seq
Sample: SRS656177
BioProject: PRJNA254971
BioSample: SAMN02906780
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: female
age: 525 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510167 9281689 928168900 625.15 ptr10.fastq.gz, SRR1510167, SRR1510167.sralite SRA
SRX648871 SRP044228 RNA-Seq SINGLE
GSM1432856: chimpanzee-PFC-2313d [ptr11]; Pan troglodytes; RNA-Seq
Sample: SRS656179
BioProject: PRJNA254971
BioSample: SAMN02906781
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: female
age: 2313 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510168 8597128 859712800 580.71 SRR1510168, SRR1510168.sralite, ptr11.fastq.gz SRA
SRX648872 SRP044228 RNA-Seq SINGLE
GSM1432857: chimpanzee-PFC-3796d [ptr12]; Pan troglodytes; RNA-Seq
Sample: SRS656180
BioProject: PRJNA254971
BioSample: SAMN02906782
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: male
age: 3796 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510169 11226560 1122656000 750.32 SRR1510169, SRR1510169.sralite, ptr12.fastq.gz SRA
SRX648873 SRP044228 RNA-Seq SINGLE
GSM1432858: chimpanzee-PFC-3978d [ptr13]; Pan troglodytes; RNA-Seq
Sample: SRS656181
BioProject: PRJNA254971
BioSample: SAMN02906783
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: male
age: 3978 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510170 8717372 871737200 569.39 ptr13.fastq.gz, SRR1510170, SRR1510170.sralite SRA
SRX648874 SRP044228 RNA-Seq SINGLE
GSM1432859: chimpanzee-PFC-4415d [ptr14]; Pan troglodytes; RNA-Seq
Sample: SRS656182
BioProject: PRJNA254971
BioSample: SAMN02906784
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: male
age: 4415 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510171 9231851 923185100 552.57 ptr14.fastq.gz, SRR1510171.sralite, SRR1510171 SRA
SRX648875 SRP044228 RNA-Seq SINGLE
GSM1432860: chimpanzee-PFC-6059d [ptr15]; Pan troglodytes; RNA-Seq
Sample: SRS656183
BioProject: PRJNA254971
BioSample: SAMN02906785
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: female
age: 6059 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510172 8792020 879202000 584.63 SRR1510172, SRR1510172.sralite, ptr15.fastq.gz SRA
SRX648876 SRP044228 RNA-Seq SINGLE
GSM1432861: chimpanzee-PFC-6132d [ptr16]; Pan troglodytes; RNA-Seq
Sample: SRS656185
BioProject: PRJNA254971
BioSample: SAMN02906786
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: female
age: 6132 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510173 8185238 818523800 493.41 ptr16.fastq.gz, SRR1510173, SRR1510173.sralite SRA
SRX648877 SRP044228 RNA-Seq SINGLE
GSM1432862: chimpanzee-PFC-6497d [ptr17]; Pan troglodytes; RNA-Seq
Sample: SRS656184
BioProject: PRJNA254971
BioSample: SAMN02906787
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: female
age: 6497 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510174 13079392 1307939200 862.2 SRR1510174, SRR1510174.sralite, ptr17.fastq.gz SRA
SRX648878 SRP044228 RNA-Seq SINGLE
GSM1432863: chimpanzee-PFC-6570d [ptr18]; Pan troglodytes; RNA-Seq
Sample: SRS656186
BioProject: PRJNA254971
BioSample: SAMN02906788
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: female
age: 6570 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510175 8501118 850111800 513.86 SRR1510175, SRR1510175.sralite, ptr18.fastq.gz SRA
SRX648879 SRP044228 RNA-Seq SINGLE
GSM1432864: chimpanzee-PFC-6752d [ptr19]; Pan troglodytes; RNA-Seq
Sample: SRS656187
BioProject: PRJNA254971
BioSample: SAMN02906789
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: female
age: 6752 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510176 9747361 974736100 637.83 SRR1510176, SRR1510176.sralite, ptr19.fastq.gz SRA
SRX648880 SRP044228 RNA-Seq SINGLE
GSM1432865: chimpanzee-PFC-7373d [ptr20]; Pan troglodytes; RNA-Seq
Sample: SRS656188
BioProject: PRJNA254971
BioSample: SAMN02906790
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: female
age: 7373 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510177 9897509 989750900 655.87 SRR1510177, SRR1510177.sralite, ptr20.fastq.gz SRA
SRX648881 SRP044228 RNA-Seq SINGLE
GSM1432866: chimpanzee-PFC-7482d [ptr21]; Pan troglodytes; RNA-Seq
Sample: SRS656189
BioProject: PRJNA254971
BioSample: SAMN02906791
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: female
age: 7482 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510178 10754703 1075470300 710.24 ptr21.fastq.gz, SRR1510178, SRR1510178.sralite SRA
SRX648882 SRP044228 RNA-Seq SINGLE
GSM1432867: chimpanzee-PFC-7774d [ptr22]; Pan troglodytes; RNA-Seq
Sample: SRS656191
BioProject: PRJNA254971
BioSample: SAMN02906792
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: male
age: 7774 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510179 10727964 1072796400 709.7 ptr22.fastq.gz, SRR1510179, SRR1510179.sralite SRA
SRX648883 SRP044228 RNA-Seq SINGLE
GSM1432868: chimpanzee-PFC-7811d [ptr23]; Pan troglodytes; RNA-Seq
Sample: SRS656190
BioProject: PRJNA254971
BioSample: SAMN02906793
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: female
age: 7811 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510180 10385964 1038596400 678.99 SRR1510180, SRR1510180.sralite, ptr23.fastq.gz SRA
SRX648884 SRP044228 RNA-Seq SINGLE
GSM1432869: chimpanzee-PFC-7848d [ptr24]; Pan troglodytes; RNA-Seq
Sample: SRS656192
BioProject: PRJNA254971
BioSample: SAMN02906794
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: female
age: 7848 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510181 10144166 1014416600 672.19 SRR1510181, SRR1510181.sralite, ptr24.fastq.gz SRA
SRX648885 SRP044228 RNA-Seq SINGLE
GSM1432870: chimpanzee-PFC-8286d [ptr25]; Pan troglodytes; RNA-Seq
Sample: SRS656193
BioProject: PRJNA254971
BioSample: SAMN02906795
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: male
age: 8286 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510182 11599628 1159962800 765.82 ptr25.fastq.gz, SRR1510182, SRR1510182.sralite SRA
SRX648886 SRP044228 RNA-Seq SINGLE
GSM1432872: chimpanzee-PFC-8724d [ptr26]; Pan troglodytes; RNA-Seq
Sample: SRS656194
BioProject: PRJNA254971
BioSample: SAMN02906796
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: male
age: 8724 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510183 8931801 893180100 540.35 SRR1510183, SRR1510183.sralite, ptr26.fastq.gz SRA
SRX648887 SRP044228 RNA-Seq SINGLE
GSM1432874: chimpanzee-PFC-8796d [ptr27]; Pan troglodytes; RNA-Seq
Sample: SRS656195
BioProject: PRJNA254971
BioSample: SAMN02906797
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: male
age: 8796 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510184 8961884 896188400 604.29 SRR1510184, SRR1510184.sralite, ptr27.fastq.gz SRA
SRX648888 SRP044228 RNA-Seq SINGLE
GSM1432878: chimpanzee-PFC-9308d [ptr28]; Pan troglodytes; RNA-Seq
Sample: SRS656196
BioProject: PRJNA254971
BioSample: SAMN02906798
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: male
age: 9308 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510185 8509062 850906200 559.5 SRR1510185, SRR1510185.sralite, ptr28.fastq.gz SRA
SRX648889 SRP044228 RNA-Seq SINGLE
GSM1432880: chimpanzee-PFC-9636d [ptr29]; Pan troglodytes; RNA-Seq
Sample: SRS656197
BioProject: PRJNA254971
BioSample: SAMN02906799
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: male
age: 9636 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510186 8686063 868606300 520.56 ptr29.fastq.gz, SRR1510186, SRR1510186.sralite SRA
SRX648890 SRP044228 RNA-Seq SINGLE
GSM1432883: chimpanzee-PFC-9892d [ptr30]; Pan troglodytes; RNA-Seq
Sample: SRS656198
BioProject: PRJNA254971
BioSample: SAMN02906800
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: male
age: 9892 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510187 12190487 1219048700 804.8 ptr30.fastq.gz, SRR1510187, SRR1510187.sralite SRA
SRX648891 SRP044228 RNA-Seq SINGLE
GSM1432886: chimpanzee-PFC-10548d [ptr31]; Pan troglodytes; RNA-Seq
Sample: SRS656199
BioProject: PRJNA254971
BioSample: SAMN02906801
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: male
age: 10548 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510188 8814780 881478000 595.39 SRR1510188, SRR1510188.sralite, ptr31.fastq.gz SRA
SRX648892 SRP044228 RNA-Seq SINGLE
GSM1432887: chimpanzee-PFC-10585d [ptr32]; Pan troglodytes; RNA-Seq
Sample: SRS656200
BioProject: PRJNA254971
BioSample: SAMN02906802
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: male
age: 10585 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510189 11260122 1126012200 741.73 ptr32.fastq.gz, SRR1510189, SRR1510189.sralite SRA
SRX648893 SRP044228 RNA-Seq SINGLE
GSM1432888: chimpanzee-PFC-11242d [ptr33]; Pan troglodytes; RNA-Seq
Sample: SRS656201
BioProject: PRJNA254971
BioSample: SAMN02906803
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: female
age: 11242 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510190 7975301 797530100 540.39 ptr33.fastq.gz, SRR1510190, SRR1510190.sralite SRA
SRX648894 SRP044228 RNA-Seq SINGLE
GSM1432889: chimpanzee-PFC-11388d [ptr34]; Pan troglodytes; RNA-Seq
Sample: SRS656202
BioProject: PRJNA254971
BioSample: SAMN02906804
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: male
age: 11388 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510191 8035483 803548300 541.35 ptr34.fastq.gz, SRR1510191, SRR1510191.sralite SRA
SRX648895 SRP044228 RNA-Seq SINGLE
GSM1432890: chimpanzee-PFC-11826d [ptr35]; Pan troglodytes; RNA-Seq
Sample: SRS656203
BioProject: PRJNA254971
BioSample: SAMN02906805
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: male
age: 11826 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510192 11244844 1124484400 760.13 SRR1510192, SRR1510192.sralite, ptr35.fastq.gz SRA
SRX648896 SRP044228 RNA-Seq SINGLE
GSM1432891: chimpanzee-PFC-12592d [ptr36]; Pan troglodytes; RNA-Seq
Sample: SRS656204
BioProject: PRJNA254971
BioSample: SAMN02906806
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: male
age: 12592 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510193 8426240 842624000 505.99 SRR1510193, SRR1510193.sralite, ptr36.fastq.gz SRA
SRX648897 SRP044228 RNA-Seq SINGLE
GSM1432892: chimpanzee-PFC-12784d [ptr37]; Pan troglodytes; RNA-Seq
Sample: SRS656205
BioProject: PRJNA254971
BioSample: SAMN02906807
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: male
age: 12784 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510194 9344238 934423800 632.76 SRR1510194.sralite, SRR1510194, ptr37.fastq.gz SRA
SRX648898 SRP044228 RNA-Seq SINGLE
GSM1432893: chimpanzee-PFC-14564d [ptr38]; Pan troglodytes; RNA-Seq
Sample: SRS656206
BioProject: PRJNA254971
BioSample: SAMN02906808
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: female
age: 14564 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510195 9675462 967546200 653.42 ptr38.fastq.gz, SRR1510195, SRR1510195.sralite SRA
SRX648899 SRP044228 RNA-Seq SINGLE
GSM1432894: chimpanzee-PFC-15549d [ptr39]; Pan troglodytes; RNA-Seq
Sample: SRS656207
BioProject: PRJNA254971
BioSample: SAMN02906809
Platform: ILLUMINA
Instrument: Illumina HiSeq 2000
Organism: Pan troglodytes
Sample attributes
source_name: dissected chimpanzee post-mortem superior frontal gyrus
sample group: chimpanzee; non-human primate
gender: male
age: 15549 days
tissue: superior frontal gyrus of the brain
Original files (1)
dissected chimpanzee post-mortem superior frontal gyrus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR1510196 9709081 970908100 652.58 ptr39.fastq.gz, SRR1510196, SRR1510196.sralite SRA

Linked Publications (1)

Widespread RNA editing dysregulation in brains from autistic individuals.
Nature neuroscience · 2019

Data Files (73)

Accession File Name Stored Type Output Type Mapping Assembly Size Download
— aut10.fastq.gz RNA-Seq 633.0 MB link
— aut14.fastq.gz RNA-Seq 564.6 MB link
— aut18.fastq.gz RNA-Seq 599.2 MB link
— aut19.fastq.gz RNA-Seq 765.1 MB link
— aut20.fastq.gz RNA-Seq 713.3 MB link
— aut21.fastq.gz RNA-Seq 476.3 MB link
— aut22.fastq.gz RNA-Seq 607.7 MB link
— aut23.fastq.gz RNA-Seq 731.0 MB link
— aut25.fastq.gz RNA-Seq 633.1 MB link
— aut26.fastq.gz RNA-Seq 679.4 MB link
— aut27.fastq.gz RNA-Seq 534.7 MB link
— aut29.fastq.gz RNA-Seq 566.5 MB link
— aut33.fastq.gz RNA-Seq 719.6 MB link
— aut5.fastq.gz RNA-Seq 764.7 MB link
— aut7.fastq.gz RNA-Seq 649.1 MB link
— ptr10.fastq.gz RNA-Seq 625.1 MB link
— ptr13.fastq.gz RNA-Seq 569.4 MB link
— ptr14.fastq.gz RNA-Seq 552.6 MB link
— ptr16.fastq.gz RNA-Seq 493.4 MB link
— ptr21.fastq.gz RNA-Seq 710.2 MB link
— ptr22.fastq.gz RNA-Seq 709.7 MB link
— ptr25.fastq.gz RNA-Seq 765.8 MB link
— ptr29.fastq.gz RNA-Seq 520.6 MB link
— ptr30.fastq.gz RNA-Seq 804.8 MB link
— ptr32.fastq.gz RNA-Seq 741.7 MB link
— ptr33.fastq.gz RNA-Seq 540.4 MB link
— ptr34.fastq.gz RNA-Seq 541.3 MB link
— ptr38.fastq.gz RNA-Seq 653.4 MB link
— ptr39.fastq.gz RNA-Seq 652.6 MB link
— ptr3.fastq.gz RNA-Seq 654.9 MB link
— ptr4.fastq.gz RNA-Seq 585.2 MB link
— SRR1510124 RNA-Seq 691.6 MB link
— SRR1510125 RNA-Seq 747.9 MB link
— SRR1510126 RNA-Seq 624.7 MB link
— SRR1510127 RNA-Seq 671.9 MB link
— SRR1510129 RNA-Seq 375.3 MB link
— SRR1510131 RNA-Seq 705.3 MB link
— SRR1510132 RNA-Seq 631.3 MB link
— SRR1510134 RNA-Seq 659.2 MB link
— SRR1510135 RNA-Seq 628.8 MB link
— SRR1510136 RNA-Seq 544.4 MB link
— SRR1510138 RNA-Seq 592.9 MB link
— SRR1510139 RNA-Seq 481.6 MB link
— SRR1510140 RNA-Seq 511.0 MB link
— SRR1510147 RNA-Seq 591.1 MB link
— SRR1510151 RNA-Seq 681.2 MB link
— SRR1510153 RNA-Seq 536.4 MB link
— SRR1510154 RNA-Seq 705.1 MB link
— SRR1510155 RNA-Seq 540.6 MB link
— SRR1510157 RNA-Seq 581.3 MB link
— SRR1510158 RNA-Seq 589.5 MB link
— SRR1510159 RNA-Seq 693.2 MB link
— SRR1510162 RNA-Seq 709.2 MB link
— SRR1510163 RNA-Seq 458.7 MB link
— SRR1510164 RNA-Seq 750.2 MB link
— SRR1510165 RNA-Seq 500.0 MB link
— SRR1510166 RNA-Seq 484.3 MB link
— SRR1510168 RNA-Seq 580.7 MB link
— SRR1510169 RNA-Seq 750.3 MB link
— SRR1510172 RNA-Seq 584.6 MB link
— SRR1510174 RNA-Seq 862.2 MB link
— SRR1510175 RNA-Seq 513.9 MB link
— SRR1510176 RNA-Seq 637.8 MB link
— SRR1510177 RNA-Seq 655.9 MB link
— SRR1510180 RNA-Seq 679.0 MB link
— SRR1510181 RNA-Seq 672.2 MB link
— SRR1510183 RNA-Seq 540.3 MB link
— SRR1510184 RNA-Seq 604.3 MB link
— SRR1510185 RNA-Seq 559.5 MB link
— SRR1510188 RNA-Seq 595.4 MB link
— SRR1510192 RNA-Seq 760.1 MB link
— SRR1510193 RNA-Seq 506.0 MB link
— SRR1510194.sralite RNA-Seq 632.8 MB link