GSE1133

GSE GEO

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tissue-specific pattern of mRNA expression

Organism: Mus musculus

Platform: GPL96

Samples: 438

Experiment Types:

Expression profiling by array

Submitted: Mar 19 2004

Last Updated: Aug 10 2018

Status: Public on Mar 19 2004

Contact: John,R,Walker (Genomics Institute of the Novartis Research Foundation)

Relations

BioProject: https://www.ncbi.nlm.nih.gov/bioproject/PRJNA87249

Summary

The tissue-specific pattern of mRNA expression can indicate important clues about gene function. High-density oligonucleotide arrays offer the opportunity to examine patterns of gene expression on a genome scale. Toward this end, we have designed custom arrays that interrogate the expression of the vast majority of protein-encoding human and mouse genes and have used them to profile a panel of 79 human and 61 mouse tissues. The resulting data set provides the expression patterns for thousands of predicted genes, as well as known and poorly characterized genes, from mice and humans. We have explored this data set for global trends in gene expression, evaluated commonly used lines of evidence in gene prediction methodologies, and investigated patterns indicative of chromosomal organization of transcription. We describe hundreds of regions of correlated transcription and show that some are subject to both tissue and parental allele-specific expression, suggesting a link between spatial expression and imprinting. Keywords: different tissues

Overall Design

baseline gene expression was taken from various human and mouse tissues

Analysis

View Data Processing

Analysis page is available for GSE1133.

Supplementary Files (1)

GSE1133_RAW.tar Download

GEO Samples (438)

GSM18584 GSM18585 GSM18586 GSM18587 GSM18588 GSM18589 GSM18590 GSM18591 GSM18592 GSM18593 GSM18594 GSM18595 GSM18596 GSM18597 GSM18598 GSM18599 GSM18600 GSM18601 GSM18602 GSM18603 GSM18604 GSM18605 GSM18606 GSM18607 GSM18608 GSM18609 GSM18610 GSM18611 GSM18612 GSM18613 GSM18614 GSM18615 GSM18616 GSM18617 GSM18618 GSM18619 GSM18620 GSM18621 GSM18622 GSM18623 GSM18624 GSM18625 GSM18626 GSM18627 GSM18628 GSM18629 GSM18630 GSM18631 GSM18632 GSM18633 GSM18634 GSM18635 GSM18636 GSM18637 GSM18638 GSM18639 GSM18640 GSM18641 GSM18642 GSM18643 GSM18644 GSM18645 GSM18646 GSM18647 GSM18648 GSM18649 GSM18650 GSM18651 GSM18652 GSM18653 GSM18654 GSM18655 GSM18656 GSM18657 GSM18658 GSM18659 GSM18660 GSM18661 GSM18662 GSM18663 GSM18664 GSM18665 GSM18666 GSM18667 GSM18668 GSM18669 GSM18670 GSM18671 GSM18672 GSM18673 GSM18674 GSM18675 GSM18676 GSM18677 GSM18678 GSM18679 GSM18680 GSM18681 GSM18682 GSM18683 GSM18684 GSM18685 GSM18686 GSM18687 GSM18688 GSM18689 GSM18690 GSM18691 GSM18692 GSM18693 GSM18694 GSM18695 GSM18696 GSM18697 GSM18698 GSM18699 GSM18700 GSM18701 GSM18702 GSM18703 GSM18704 GSM18705 GSM18706 GSM18707 GSM18708 GSM18709 GSM18710 GSM18711 GSM18712 GSM18713 GSM18714 GSM18715 GSM18716 GSM18717 GSM18718 GSM18719 GSM18720 GSM18721 GSM18722 GSM18723 GSM18724 GSM18725 GSM18726 GSM18727 GSM18728 GSM18729 GSM18730 GSM18731 GSM18732 GSM18733 GSM18734 GSM18735 GSM18736 GSM18737 GSM18738 GSM18739 GSM18740 GSM18741 GSM18742 GSM18743 GSM18744 GSM18745 GSM18746 GSM18747 GSM18748 GSM18749 GSM18750 GSM18751 GSM18752 GSM18753 GSM18754 GSM18755 GSM18756 GSM18757 GSM18758 GSM18759 GSM18760 GSM18761 GSM18762 GSM18763 GSM18764 GSM18765 GSM18766 GSM18767 GSM18768 GSM18769 GSM18770 GSM18771 GSM18772 GSM18773 GSM18774 GSM18775 GSM18776 GSM18777 GSM18778 GSM18779 GSM18780 GSM18781 GSM18782 GSM18783 GSM18784 GSM18785 GSM18786 GSM18787 GSM18788 GSM18789 GSM18790 GSM18791 GSM18792 GSM18793 GSM18794 GSM18795 GSM18796 GSM18797 GSM18798 GSM18799 GSM18800 GSM18801 GSM18802 GSM18803 GSM18804 GSM18805 GSM18806 GSM18807 GSM18808 GSM18809 GSM18810 GSM18811 GSM18812 GSM18813 GSM18814 GSM18815 GSM18816 GSM18817 GSM18818 GSM18819 GSM18820 GSM18821 GSM18822 GSM18823 GSM18824 GSM18825 GSM18826 GSM18827 GSM18828 GSM18829 GSM18830 GSM18831 GSM18832 GSM18833 GSM18834 GSM18835 GSM18836 GSM18837 GSM18838 GSM18839 GSM18840 GSM18841 GSM18842 GSM18843 GSM18844 GSM18845 GSM18846 GSM18847 GSM18848 GSM18849 GSM18850 GSM18851 GSM18852 GSM18853 GSM18854 GSM18855 GSM18856 GSM18857 GSM18858 GSM18859 GSM18860 GSM18861 GSM18862 GSM18863 GSM18865 GSM18866 GSM18867 GSM18868 GSM18869 GSM18870 GSM18871 GSM18872 GSM18873 GSM18874 GSM18875 GSM18876 GSM18877 GSM18878 GSM18879 GSM18880 GSM18881 GSM18882 GSM18883 GSM18884 GSM18885 GSM18886 GSM18887 GSM18888 GSM18889 GSM18890 GSM18891 GSM18892 GSM18893 GSM18894 GSM18895 GSM18896 GSM18897 GSM18898 GSM18899 GSM18900 GSM18901 GSM18902 GSM18903 GSM18904 GSM18905 GSM18906 GSM18907 GSM18908 GSM18909 GSM18910 GSM18911 GSM18912 GSM18913 GSM18914 GSM18915 GSM18916 GSM18917 GSM18918 GSM18919 GSM18920 GSM18921 GSM18922 GSM18923 GSM18924 GSM18925 GSM18926 GSM18927 GSM18928 GSM18929 GSM18930 GSM18931 GSM18932 GSM18933 GSM18934 GSM18935 GSM18936 GSM18937 GSM18938 GSM18939 GSM18940 GSM18941 GSM18942 GSM18943 GSM18944 GSM18945 GSM18946 GSM18947 GSM18948 GSM18949 GSM18950 GSM18951 GSM18952 GSM18953 GSM18954 GSM18955 GSM18956 GSM18957 GSM18958 GSM18959 GSM18960 GSM18961 GSM18962 GSM18963 GSM18964 GSM18965 GSM18966 GSM18967 GSM18968 GSM18969 GSM18970 GSM18971 GSM18972 GSM18973 GSM18974 GSM18975 GSM18976 GSM18977 GSM18978 GSM18979 GSM18980 GSM18981 GSM18982 GSM18983 GSM18984 GSM18985 GSM18986 GSM18987 GSM18988 GSM18989 GSM18990 GSM18991 GSM18992 GSM18993 GSM18994 GSM18995 GSM18996 GSM18997 GSM18998 GSM18999 GSM19000 GSM19001 GSM19002 GSM19003 GSM19004 GSM19005 GSM19006 GSM19007 GSM19008 GSM19009 GSM19010 GSM19011 GSM19012 GSM19013 GSM19014 GSM19015 GSM19016 GSM19017 GSM19018 GSM19019 GSM19020 GSM19021 GSM19022

Dataset Citations (1)

PubMed citation (PMID 15075390)

Linked Publications (1)

Long pre-mRNA depletion and RNA missplicing contribute to neuronal vulnerability from loss of TDP-43.

Nature neuroscience · 2011