ENCSR000AEN
ENCSR ENCODERNA Evaluation K562 Long Total from Graveley
Organism:
Homo sapiens
Experiment Types:
total RNA-seq
Status:
released
Contact:
Brenton Graveley, UConn
Summary
total RNA-seq of in Homo sapiens K562
Overall Design
RNA Evaluation K562 Long Total from Graveley
Analysis
View Data Processing
Analysis page is available for ENCSR000AEN.
ENCODE Metadata
Total file size: 305.1 GBAssay: total RNA-seq
Biosample: Homo sapiens K562
Files: 110
Unique ENC file IDs: 110
File Formats
bigWig (68)
bam (24)
tsv (14)
fastq (4)
Output types (13)
alignments (18)
minus strand signal of unique reads (16)
plus strand signal of unique reads (16)
minus strand signal of all reads (14)
plus strand signal of all reads (14)
transcript quantifications (8)
gene quantifications (6)
transcriptome alignments (6)
reads (4)
minus strand signal (2)
plus strand signal (2)
signal (2)
signal of unique reads (2)
Data Files (110)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF001RRQ | ENCFF001RRQ.bam | bam (alignments) | alignments | 11.3 GB | link | ||
| ENCFF001RRS | ENCFF001RRS.bam | bam (alignments) | alignments | 8.5 GB | link | ||
| ENCFF001RWN | ENCFF001RWN.bam | bam (alignments) | alignments | 8.5 GB | link | ||
| ENCFF001RWO | ENCFF001RWO.bam | bam (alignments) | alignments | 11.4 GB | link | ||
| ENCFF001SAS | ENCFF001SAS.bam | bam (alignments) | alignments | 8.5 GB | link | ||
| ENCFF001SAT | ENCFF001SAT.bam | bam (alignments) | alignments | 11.3 GB | link | ||
| ENCFF001SET | ENCFF001SET.bam | bam (alignments) | alignments | 8.5 GB | link | ||
| ENCFF001SFC | ENCFF001SFC.bam | bam (alignments) | alignments | 11.3 GB | link | ||
| ENCFF219JME | ENCFF219JME.bam | bam (alignments) | alignments | 12.2 GB | link | ||
| ENCFF359KTO | ENCFF359KTO.bam | bam (alignments) | alignments | 13.3 GB | link | ||
| ENCFF404AUP | ENCFF404AUP.bam | bam (alignments) | alignments | 8.6 GB | link | ||
| ENCFF472ZVZ | ENCFF472ZVZ.bam | bam (alignments) | alignments | 11.4 GB | link | ||
| ENCFF518LCC | ENCFF518LCC.bam | bam (alignments) | alignments | 9.8 GB | link | ||
| ENCFF537SDP | ENCFF537SDP.bam | bam (alignments) | alignments | 13.7 GB | link | ||
| ENCFF645XVJ | ENCFF645XVJ.bam | bam (alignments) | alignments | 10.3 GB | link | ||
| ENCFF704RNX | ENCFF704RNX.bam | bam (alignments) | alignments | 16.9 GB | link | ||
| ENCFF724QBU | ENCFF724QBU.bam | bam (alignments) | alignments | 12.1 GB | link | ||
| ENCFF967VIP | ENCFF967VIP.bam | bam (alignments) | alignments | 16.9 GB | link | ||
| ENCFF106IKO | ENCFF106IKO.bam | bam (transcriptome alignments) | transcriptome alignments | 11.2 GB | link | ||
| ENCFF251MPZ | ENCFF251MPZ.bam | bam (transcriptome alignments) | transcriptome alignments | 12.6 GB | link | ||
| ENCFF346EPF | ENCFF346EPF.bam | bam (transcriptome alignments) | transcriptome alignments | 8.3 GB | link | ||
| ENCFF497TBT | ENCFF497TBT.bam | bam (transcriptome alignments) | transcriptome alignments | 8.3 GB | link | ||
| ENCFF547HOC | ENCFF547HOC.bam | bam (transcriptome alignments) | transcriptome alignments | 9.4 GB | link | ||
| ENCFF681HJP | ENCFF681HJP.bam | bam (transcriptome alignments) | transcriptome alignments | 11.2 GB | link | ||
| ENCFF001SEO | ENCFF001SEO.bigWig | bigWig (minus strand signal) | minus strand signal | 164.5 MB | link | ||
| ENCFF001SER | ENCFF001SER.bigWig | bigWig (minus strand signal) | minus strand signal | 195.3 MB | link | ||
| ENCFF001RXL | ENCFF001RXL.bigWig | bigWig (minus strand signal of all reads) | minus strand signal of all reads | 177.8 MB | link | ||
| ENCFF001RXM | ENCFF001RXM.bigWig | bigWig (minus strand signal of all reads) | minus strand signal of all reads | 211.5 MB | link | ||
| ENCFF001SKU | ENCFF001SKU.bigWig | bigWig (minus strand signal of all reads) | minus strand signal of all reads | 206.2 MB | link | ||
| ENCFF001SKY | ENCFF001SKY.bigWig | bigWig (minus strand signal of all reads) | minus strand signal of all reads | 243.7 MB | link | ||
| ENCFF061KDL | ENCFF061KDL.bigWig | bigWig (minus strand signal of all reads) | minus strand signal of all reads | 252.1 MB | link | ||
| ENCFF082SVY | ENCFF082SVY.bigWig | bigWig (minus strand signal of all reads) | minus strand signal of all reads | 197.7 MB | link | ||
| ENCFF291SEO | ENCFF291SEO.bigWig | bigWig (minus strand signal of all reads) | minus strand signal of all reads | 218.9 MB | link | ||
| ENCFF491TZY | ENCFF491TZY.bigWig | bigWig (minus strand signal of all reads) | minus strand signal of all reads | 253.3 MB | link | ||
| ENCFF617ZPZ | ENCFF617ZPZ.bigWig | bigWig (minus strand signal of all reads) | minus strand signal of all reads | 215.0 MB | link | ||
| ENCFF672QIN | ENCFF672QIN.bigWig | bigWig (minus strand signal of all reads) | minus strand signal of all reads | 224.3 MB | link | ||
| ENCFF695MCL | ENCFF695MCL.bigWig | bigWig (minus strand signal of all reads) | minus strand signal of all reads | 218.7 MB | link | ||
| ENCFF698YYT | ENCFF698YYT.bigWig | bigWig (minus strand signal of all reads) | minus strand signal of all reads | 228.3 MB | link | ||
| ENCFF887AYR | ENCFF887AYR.bigWig | bigWig (minus strand signal of all reads) | minus strand signal of all reads | 191.2 MB | link | ||
| ENCFF930WGB | ENCFF930WGB.bigWig | bigWig (minus strand signal of all reads) | minus strand signal of all reads | 253.3 MB | link | ||
| ENCFF001RWV | ENCFF001RWV.bigWig | bigWig (minus strand signal of unique reads) | minus strand signal of unique reads | 163.9 MB | link | ||
| ENCFF001RWW | ENCFF001RWW.bigWig | bigWig (minus strand signal of unique reads) | minus strand signal of unique reads | 195.3 MB | link | ||
| ENCFF001SEM | ENCFF001SEM.bigWig | bigWig (minus strand signal of unique reads) | minus strand signal of unique reads | 156.0 MB | link | ||
| ENCFF001SEQ | ENCFF001SEQ.bigWig | bigWig (minus strand signal of unique reads) | minus strand signal of unique reads | 185.2 MB | link | ||
| ENCFF001SKQ | ENCFF001SKQ.bigWig | bigWig (minus strand signal of unique reads) | minus strand signal of unique reads | 187.2 MB | link | ||
| ENCFF001SKV | ENCFF001SKV.bigWig | bigWig (minus strand signal of unique reads) | minus strand signal of unique reads | 222.8 MB | link | ||
| ENCFF118MJD | ENCFF118MJD.bigWig | bigWig (minus strand signal of unique reads) | minus strand signal of unique reads | 195.0 MB | link | ||
| ENCFF238WZY | ENCFF238WZY.bigWig | bigWig (minus strand signal of unique reads) | minus strand signal of unique reads | 183.4 MB | link | ||
| ENCFF322XKJ | ENCFF322XKJ.bigWig | bigWig (minus strand signal of unique reads) | minus strand signal of unique reads | 195.9 MB | link | ||
| ENCFF451DAY | ENCFF451DAY.bigWig | bigWig (minus strand signal of unique reads) | minus strand signal of unique reads | 180.2 MB | link | ||
| ENCFF516IKJ | ENCFF516IKJ.bigWig | bigWig (minus strand signal of unique reads) | minus strand signal of unique reads | 227.2 MB | link | ||
| ENCFF578WIM | ENCFF578WIM.bigWig | bigWig (minus strand signal of unique reads) | minus strand signal of unique reads | 195.6 MB | link | ||
| ENCFF743XFR | ENCFF743XFR.bigWig | bigWig (minus strand signal of unique reads) | minus strand signal of unique reads | 226.4 MB | link | ||
| ENCFF778JRP | ENCFF778JRP.bigWig | bigWig (minus strand signal of unique reads) | minus strand signal of unique reads | 209.3 MB | link | ||
| ENCFF875YJX | ENCFF875YJX.bigWig | bigWig (minus strand signal of unique reads) | minus strand signal of unique reads | 213.1 MB | link | ||
| ENCFF894UPL | ENCFF894UPL.bigWig | bigWig (minus strand signal of unique reads) | minus strand signal of unique reads | 227.5 MB | link | ||
| ENCFF001SEN | ENCFF001SEN.bigWig | bigWig (plus strand signal) | plus strand signal | 165.7 MB | link | ||
| ENCFF001SEU | ENCFF001SEU.bigWig | bigWig (plus strand signal) | plus strand signal | 196.8 MB | link | ||
| ENCFF001RXT | ENCFF001RXT.bigWig | bigWig (plus strand signal of all reads) | plus strand signal of all reads | 178.9 MB | link | ||
| ENCFF001RXU | ENCFF001RXU.bigWig | bigWig (plus strand signal of all reads) | plus strand signal of all reads | 213.1 MB | link | ||
| ENCFF001SKR | ENCFF001SKR.bigWig | bigWig (plus strand signal of all reads) | plus strand signal of all reads | 207.1 MB | link | ||
| ENCFF001SKW | ENCFF001SKW.bigWig | bigWig (plus strand signal of all reads) | plus strand signal of all reads | 244.9 MB | link | ||
| ENCFF171NTQ | ENCFF171NTQ.bigWig | bigWig (plus strand signal of all reads) | plus strand signal of all reads | 256.4 MB | link | ||
| ENCFF172MWL | ENCFF172MWL.bigWig | bigWig (plus strand signal of all reads) | plus strand signal of all reads | 221.4 MB | link | ||
| ENCFF295KNU | ENCFF295KNU.bigWig | bigWig (plus strand signal of all reads) | plus strand signal of all reads | 254.5 MB | link | ||
| ENCFF369SRU | ENCFF369SRU.bigWig | bigWig (plus strand signal of all reads) | plus strand signal of all reads | 231.4 MB | link | ||
| ENCFF450RLE | ENCFF450RLE.bigWig | bigWig (plus strand signal of all reads) | plus strand signal of all reads | 256.4 MB | link | ||
| ENCFF464HGS | ENCFF464HGS.bigWig | bigWig (plus strand signal of all reads) | plus strand signal of all reads | 216.9 MB | link | ||
| ENCFF807HQO | ENCFF807HQO.bigWig | bigWig (plus strand signal of all reads) | plus strand signal of all reads | 194.1 MB | link | ||
| ENCFF906FIP | ENCFF906FIP.bigWig | bigWig (plus strand signal of all reads) | plus strand signal of all reads | 221.3 MB | link | ||
| ENCFF934OIM | ENCFF934OIM.bigWig | bigWig (plus strand signal of all reads) | plus strand signal of all reads | 200.4 MB | link | ||
| ENCFF985TJA | ENCFF985TJA.bigWig | bigWig (plus strand signal of all reads) | plus strand signal of all reads | 227.8 MB | link | ||
| ENCFF001RXD | ENCFF001RXD.bigWig | bigWig (plus strand signal of unique reads) | plus strand signal of unique reads | 166.5 MB | link | ||
| ENCFF001RXE | ENCFF001RXE.bigWig | bigWig (plus strand signal of unique reads) | plus strand signal of unique reads | 198.5 MB | link | ||
| ENCFF001SEL | ENCFF001SEL.bigWig | bigWig (plus strand signal of unique reads) | plus strand signal of unique reads | 158.6 MB | link | ||
| ENCFF001SEP | ENCFF001SEP.bigWig | bigWig (plus strand signal of unique reads) | plus strand signal of unique reads | 188.6 MB | link | ||
| ENCFF001SKT | ENCFF001SKT.bigWig | bigWig (plus strand signal of unique reads) | plus strand signal of unique reads | 190.9 MB | link | ||
| ENCFF001SKX | ENCFF001SKX.bigWig | bigWig (plus strand signal of unique reads) | plus strand signal of unique reads | 226.9 MB | link | ||
| ENCFF060XSB | ENCFF060XSB.bigWig | bigWig (plus strand signal of unique reads) | plus strand signal of unique reads | 213.8 MB | link | ||
| ENCFF278MPF | ENCFF278MPF.bigWig | bigWig (plus strand signal of unique reads) | plus strand signal of unique reads | 217.6 MB | link | ||
| ENCFF338GUE | ENCFF338GUE.bigWig | bigWig (plus strand signal of unique reads) | plus strand signal of unique reads | 232.1 MB | link | ||
| ENCFF436ZDX | ENCFF436ZDX.bigWig | bigWig (plus strand signal of unique reads) | plus strand signal of unique reads | 187.2 MB | link | ||
| ENCFF456TGV | ENCFF456TGV.bigWig | bigWig (plus strand signal of unique reads) | plus strand signal of unique reads | 183.9 MB | link | ||
| ENCFF471XSG | ENCFF471XSG.bigWig | bigWig (plus strand signal of unique reads) | plus strand signal of unique reads | 199.2 MB | link | ||
| ENCFF657EOD | ENCFF657EOD.bigWig | bigWig (plus strand signal of unique reads) | plus strand signal of unique reads | 199.7 MB | link | ||
| ENCFF763OOB | ENCFF763OOB.bigWig | bigWig (plus strand signal of unique reads) | plus strand signal of unique reads | 232.2 MB | link | ||
| ENCFF855QYP | ENCFF855QYP.bigWig | bigWig (plus strand signal of unique reads) | plus strand signal of unique reads | 231.2 MB | link | ||
| ENCFF919EXM | ENCFF919EXM.bigWig | bigWig (plus strand signal of unique reads) | plus strand signal of unique reads | 200.0 MB | link | ||
| ENCFF001RRD | ENCFF001RRD.bigWig | bigWig (signal) | signal | 416.4 MB | link | ||
| ENCFF001RRM | ENCFF001RRM.bigWig | bigWig (signal) | signal | 351.0 MB | link | ||
| ENCFF001RRF | ENCFF001RRF.bigWig | bigWig (signal of unique reads) | signal of unique reads | 392.3 MB | link | ||
| ENCFF001RRO | ENCFF001RRO.bigWig | bigWig (signal of unique reads) | signal of unique reads | 330.5 MB | link | ||
| ENCFF001RCT | ENCFF001RCT.fastq | fastq (reads) | reads | 7.1 GB | link | ||
| ENCFF001RCU | ENCFF001RCU.fastq | fastq (reads) | reads | 5.3 GB | link | ||
| ENCFF001RDB | ENCFF001RDB.fastq | fastq (reads) | reads | 7.1 GB | link | ||
| ENCFF001RDC | ENCFF001RDC.fastq | fastq (reads) | reads | 5.3 GB | link | ||
| ENCFF450IVD | ENCFF450IVD.tsv | tsv (gene quantifications) | gene quantifications | 9.1 MB | link | ||
| ENCFF488ZHV | ENCFF488ZHV.tsv | tsv (gene quantifications) | gene quantifications | 10.4 MB | link | ||
| ENCFF534SDC | ENCFF534SDC.tsv | tsv (gene quantifications) | gene quantifications | 9.1 MB | link | ||
| ENCFF553DDU | ENCFF553DDU.tsv | tsv (gene quantifications) | gene quantifications | 9.5 MB | link | ||
| ENCFF731FLQ | ENCFF731FLQ.tsv | tsv (gene quantifications) | gene quantifications | 10.4 MB | link | ||
| ENCFF811VBA | ENCFF811VBA.tsv | tsv (gene quantifications) | gene quantifications | 9.5 MB | link | ||
| ENCFF010QAI | ENCFF010QAI.tsv | tsv (transcript quantifications) | transcript quantifications | 25.5 MB | link | ||
| ENCFF187BSB | ENCFF187BSB.tsv | tsv (transcript quantifications) | transcript quantifications | 25.0 MB | link | ||
| ENCFF190YMV | ENCFF190YMV.tsv | tsv (transcript quantifications) | transcript quantifications | 30.0 MB | link | ||
| ENCFF345SBQ | ENCFF345SBQ.tsv | tsv (transcript quantifications) | transcript quantifications | 25.4 MB | link | ||
| ENCFF363JRF | ENCFF363JRF.tsv | tsv (transcript quantifications) | transcript quantifications | 25.0 MB | link | ||
| ENCFF366BBR | ENCFF366BBR.tsv | tsv (transcript quantifications) | transcript quantifications | 29.9 MB | link | ||
| ENCFF814LVG | ENCFF814LVG.tsv | tsv (transcript quantifications) | transcript quantifications | 27.5 MB | link | ||
| ENCFF870NVF | ENCFF870NVF.tsv | tsv (transcript quantifications) | transcript quantifications | 27.6 MB | link |