#!/usr/bin/env bash
# Bulk download script for ENCSR135VMS
# Generated from Yeo Lab Publications Database
# Total files: 36

OUTDIR="ENCSR135VMS"
mkdir -p "$OUTDIR"
cd "$OUTDIR"

# --- Additional data files ---
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF055MTP/@@download/ENCFF055MTP.bam"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF229GCX/@@download/ENCFF229GCX.bam"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF252SPM/@@download/ENCFF252SPM.bam"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF443NQT/@@download/ENCFF443NQT.bam"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF042LCL/@@download/ENCFF042LCL.bed.gz"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF220ECM/@@download/ENCFF220ECM.bed.gz"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF482BDD/@@download/ENCFF482BDD.bed.gz"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF485KSY/@@download/ENCFF485KSY.bed.gz"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF581BHC/@@download/ENCFF581BHC.bed.gz"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF637JMJ/@@download/ENCFF637JMJ.bed.gz"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF825AVT/@@download/ENCFF825AVT.bed.gz"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF870HZF/@@download/ENCFF870HZF.bed.gz"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF922GMC/@@download/ENCFF922GMC.bed.gz"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF985ECA/@@download/ENCFF985ECA.bed.gz"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF066ALT/@@download/ENCFF066ALT.bigBed"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF078QXW/@@download/ENCFF078QXW.bigBed"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF117KLF/@@download/ENCFF117KLF.bigBed"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF280DYY/@@download/ENCFF280DYY.bigBed"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF291ZAB/@@download/ENCFF291ZAB.bigBed"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF294QOA/@@download/ENCFF294QOA.bigBed"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF307ODB/@@download/ENCFF307ODB.bigBed"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF549LQW/@@download/ENCFF549LQW.bigBed"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF625DWV/@@download/ENCFF625DWV.bigBed"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF948HKJ/@@download/ENCFF948HKJ.bigBed"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF005DOM/@@download/ENCFF005DOM.bigWig"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF082MII/@@download/ENCFF082MII.bigWig"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF322HSE/@@download/ENCFF322HSE.bigWig"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF815COD/@@download/ENCFF815COD.bigWig"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF082LOD/@@download/ENCFF082LOD.bigWig"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF088YQX/@@download/ENCFF088YQX.bigWig"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF782KQY/@@download/ENCFF782KQY.bigWig"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF814SQP/@@download/ENCFF814SQP.bigWig"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF004CIG/@@download/ENCFF004CIG.fastq.gz"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF407UHQ/@@download/ENCFF407UHQ.fastq.gz"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF453KFP/@@download/ENCFF453KFP.fastq.gz"
curl -L -O -C - "https://www.encodeproject.org/files/ENCFF754DEC/@@download/ENCFF754DEC.fastq.gz"

echo "Download complete. Files saved to $OUTDIR"