#!/usr/bin/env bash # Bulk download script for ENCSR156APP # Generated from Yeo Lab Publications Database # Total files: 66 OUTDIR="ENCSR156APP" mkdir -p "$OUTDIR" cd "$OUTDIR" # --- Additional data files --- curl -L -O -C - "https://www.encodeproject.org/files/ENCFF081QKL/@@download/ENCFF081QKL.bam" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF144XUD/@@download/ENCFF144XUD.bam" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF240ZTM/@@download/ENCFF240ZTM.bam" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF776NZQ/@@download/ENCFF776NZQ.bam" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF848PEZ/@@download/ENCFF848PEZ.bam" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF885UDL/@@download/ENCFF885UDL.bam" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF027EGW/@@download/ENCFF027EGW.bam" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF238PXC/@@download/ENCFF238PXC.bam" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF265FQX/@@download/ENCFF265FQX.bam" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF607XLP/@@download/ENCFF607XLP.bam" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF720KWW/@@download/ENCFF720KWW.bam" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF887JKP/@@download/ENCFF887JKP.bam" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF623DYE/@@download/ENCFF623DYE.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF630MSZ/@@download/ENCFF630MSZ.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF793YIO/@@download/ENCFF793YIO.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF304TGO/@@download/ENCFF304TGO.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF493LIW/@@download/ENCFF493LIW.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF507YYD/@@download/ENCFF507YYD.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF509TID/@@download/ENCFF509TID.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF412ETL/@@download/ENCFF412ETL.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF790DOB/@@download/ENCFF790DOB.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF803CWD/@@download/ENCFF803CWD.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF875ZPV/@@download/ENCFF875ZPV.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF908HDA/@@download/ENCFF908HDA.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF024DUK/@@download/ENCFF024DUK.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF129THB/@@download/ENCFF129THB.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF497EQS/@@download/ENCFF497EQS.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF673SKG/@@download/ENCFF673SKG.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF685RJG/@@download/ENCFF685RJG.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF694HVC/@@download/ENCFF694HVC.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF345LZT/@@download/ENCFF345LZT.bigBed" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF372MYD/@@download/ENCFF372MYD.bigBed" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF924OVI/@@download/ENCFF924OVI.bigBed" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF046OVF/@@download/ENCFF046OVF.bigBed" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF250LKC/@@download/ENCFF250LKC.bigBed" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF639IOF/@@download/ENCFF639IOF.bigBed" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF022QNU/@@download/ENCFF022QNU.bigBed" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF472NST/@@download/ENCFF472NST.bigBed" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF182LNH/@@download/ENCFF182LNH.bigBed" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF230VSL/@@download/ENCFF230VSL.bigBed" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF271EVQ/@@download/ENCFF271EVQ.bigBed" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF509CZV/@@download/ENCFF509CZV.bigBed" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF592NWC/@@download/ENCFF592NWC.bigBed" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF611CVN/@@download/ENCFF611CVN.bigBed" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF042QVS/@@download/ENCFF042QVS.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF123FYD/@@download/ENCFF123FYD.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF133PYQ/@@download/ENCFF133PYQ.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF153IOE/@@download/ENCFF153IOE.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF265KYA/@@download/ENCFF265KYA.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF423VMC/@@download/ENCFF423VMC.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF553QQK/@@download/ENCFF553QQK.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF856MEV/@@download/ENCFF856MEV.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF897ZXQ/@@download/ENCFF897ZXQ.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF008YMP/@@download/ENCFF008YMP.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF341IRG/@@download/ENCFF341IRG.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF477CSW/@@download/ENCFF477CSW.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF482MDB/@@download/ENCFF482MDB.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF601GSA/@@download/ENCFF601GSA.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF605CXY/@@download/ENCFF605CXY.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF842EBN/@@download/ENCFF842EBN.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF850LIO/@@download/ENCFF850LIO.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF935TCV/@@download/ENCFF935TCV.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF531POO/@@download/ENCFF531POO.fastq.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF586ZST/@@download/ENCFF586ZST.fastq.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF744SCS/@@download/ENCFF744SCS.fastq.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF992OBB/@@download/ENCFF992OBB.fastq.gz" echo "Download complete. Files saved to $OUTDIR"