#!/usr/bin/env bash # Bulk download script for ENCSR220YXI # Generated from Yeo Lab Publications Database # Total files: 70 OUTDIR="ENCSR220YXI" mkdir -p "$OUTDIR" cd "$OUTDIR" # --- Additional data files --- curl -L -O -C - "https://www.encodeproject.org/files/ENCFF103MEZ/@@download/ENCFF103MEZ.bam" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF309AFO/@@download/ENCFF309AFO.bam" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF352PPM/@@download/ENCFF352PPM.bam" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF367OYT/@@download/ENCFF367OYT.bam" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF585GPW/@@download/ENCFF585GPW.bam" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF585IBD/@@download/ENCFF585IBD.bam" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF787SYP/@@download/ENCFF787SYP.bam" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF889DCH/@@download/ENCFF889DCH.bam" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF895DLK/@@download/ENCFF895DLK.bam" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF922FDO/@@download/ENCFF922FDO.bam" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF072JIS/@@download/ENCFF072JIS.bam" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF596NRP/@@download/ENCFF596NRP.bam" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF630RXB/@@download/ENCFF630RXB.bam" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF654BRU/@@download/ENCFF654BRU.bam" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF691CZV/@@download/ENCFF691CZV.bam" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF743VWB/@@download/ENCFF743VWB.bam" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF869HMG/@@download/ENCFF869HMG.bam" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF876REW/@@download/ENCFF876REW.bam" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF648YCS/@@download/ENCFF648YCS.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF886UMM/@@download/ENCFF886UMM.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF273SJD/@@download/ENCFF273SJD.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF783OQY/@@download/ENCFF783OQY.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF875DDX/@@download/ENCFF875DDX.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF915JHD/@@download/ENCFF915JHD.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF594PWI/@@download/ENCFF594PWI.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF709DMO/@@download/ENCFF709DMO.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF751GIZ/@@download/ENCFF751GIZ.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF417RQZ/@@download/ENCFF417RQZ.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF785ACI/@@download/ENCFF785ACI.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF310EMX/@@download/ENCFF310EMX.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF406DQD/@@download/ENCFF406DQD.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF520LVQ/@@download/ENCFF520LVQ.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF692UVD/@@download/ENCFF692UVD.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF817OVD/@@download/ENCFF817OVD.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF894WLR/@@download/ENCFF894WLR.bed.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF046WLD/@@download/ENCFF046WLD.bigBed" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF619FVA/@@download/ENCFF619FVA.bigBed" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF261XHJ/@@download/ENCFF261XHJ.bigBed" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF588RFX/@@download/ENCFF588RFX.bigBed" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF749IGW/@@download/ENCFF749IGW.bigBed" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF202AJJ/@@download/ENCFF202AJJ.bigBed" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF902BIO/@@download/ENCFF902BIO.bigBed" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF194LUL/@@download/ENCFF194LUL.bigBed" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF756RFF/@@download/ENCFF756RFF.bigBed" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF830DKY/@@download/ENCFF830DKY.bigBed" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF872PFO/@@download/ENCFF872PFO.bigBed" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF905KPT/@@download/ENCFF905KPT.bigBed" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF959ALN/@@download/ENCFF959ALN.bigBed" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF035SWM/@@download/ENCFF035SWM.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF106XAK/@@download/ENCFF106XAK.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF187QGT/@@download/ENCFF187QGT.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF450JYN/@@download/ENCFF450JYN.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF472ISV/@@download/ENCFF472ISV.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF684SIQ/@@download/ENCFF684SIQ.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF705IRU/@@download/ENCFF705IRU.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF729VEX/@@download/ENCFF729VEX.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF988DTQ/@@download/ENCFF988DTQ.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF058KNJ/@@download/ENCFF058KNJ.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF313SOS/@@download/ENCFF313SOS.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF588AWO/@@download/ENCFF588AWO.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF591WWL/@@download/ENCFF591WWL.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF699GMR/@@download/ENCFF699GMR.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF724KTU/@@download/ENCFF724KTU.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF733JWK/@@download/ENCFF733JWK.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF835LTJ/@@download/ENCFF835LTJ.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF966OSI/@@download/ENCFF966OSI.bigWig" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF308HCL/@@download/ENCFF308HCL.fastq.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF331BDZ/@@download/ENCFF331BDZ.fastq.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF486FVK/@@download/ENCFF486FVK.fastq.gz" curl -L -O -C - "https://www.encodeproject.org/files/ENCFF984DIG/@@download/ENCFF984DIG.fastq.gz" echo "Download complete. Files saved to $OUTDIR"