#!/usr/bin/env bash
# Bulk download script for GSE280897
# Generated from Yeo Lab Publications Database
# Total files: 7

OUTDIR="GSE280897"
mkdir -p "$OUTDIR"
cd "$OUTDIR"

# --- GEO supplementary files ---
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE280nnn/GSE280897/suppl/GSE280897_L140P_featurecounts_unfiltered.csv.gz" -O "GSE280897_L140P_featurecounts_unfiltered.csv.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE280nnn/GSE280897/suppl/GSE280897_L140PvsWT.SE.MATS.JC.txt.gz" -O "GSE280897_L140PvsWT.SE.MATS.JC.txt.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE280nnn/GSE280897/suppl/GSE280897_PUF60_KD_featurecounts_unfiltered.csv.gz" -O "GSE280897_PUF60_KD_featurecounts_unfiltered.csv.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE280nnn/GSE280897/suppl/GSE280897_mcf10a_puf60.SE.MATS.JC.txt.gz" -O "GSE280897_mcf10a_puf60.SE.MATS.JC.txt.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE280nnn/GSE280897/suppl/GSE280897_mdamb231_puf60.SE.MATS.JC.txt.gz" -O "GSE280897_mdamb231_puf60.SE.MATS.JC.txt.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE280nnn/GSE280897/suppl/GSE280897_mdamb436_puf60.SE.MATS.JC.txt.gz" -O "GSE280897_mdamb436_puf60.SE.MATS.JC.txt.gz"
wget -nc "ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE280nnn/GSE280897/suppl/GSE280897_sum149_puf60.SE.MATS.JC.txt.gz" -O "GSE280897_sum149_puf60.SE.MATS.JC.txt.gz"

echo "Download complete. Files saved to $OUTDIR"