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GSE73721

GSE GEO Potentially related
View on GEO Export SRA CSV

RNA-Seq of human astrocytes

Organism: Homo sapiens, Mus musculus
Platform: GPL18573, GPL19057
Samples: 45

Summary

Astrocytes were purified from fetal and adult human brain tissue using an immunopanning method with the HepaCAM antibody. Samples were taken from otherwise 'healthy' pieces of tissue, unless otherwise specified.

Overall Design

6 fetal astrocyte samples, 12 adult astrocyte samples, 8 GBM or sclerotic hippocampal samples, 4 whole human cortex samples, 4 adult mouse astrocyte samples, and 11 human samples of other purified CNS cell types

Analysis

View Data Processing
Analysis page is available for GSE73721.

Supplementary Files (1)

GSE73721_Human_and_mouse_table.csv.gz Download
GEO Samples (45)
GSM1901303 GSM1901304 GSM1901305 GSM1901306 GSM1901307 GSM1901308 GSM1901309 GSM1901310 GSM1901311 GSM1901312 GSM1901313 GSM1901314 GSM1901315 GSM1901316 GSM1901317 GSM1901318 GSM1901319 GSM1901320 GSM1901321 GSM1901322 GSM1901323 GSM1901324 GSM1901325 GSM1901326 GSM1901327 GSM1901328 GSM1901329 GSM1901330 GSM1901331 GSM1901332 GSM1901333 GSM1901334 GSM1901335 GSM1901336 GSM1901337 GSM1901338 GSM1901339 GSM1901340 GSM1901341 GSM1901342 GSM1901343 GSM1901344 GSM1901345 GSM1901346 GSM1901347

SRA Experiments (45) and Runs (45)

Total: 83096 MB
SRX1303782 SRP064454 RNA-Seq PAIRED
Sample: SRS1098751
BioProject: PRJNA297760
BioSample: SAMN04145499
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557083 491378 73215054 25.0 SRA
SRX1303783 SRP064454 RNA-Seq PAIRED
Sample: SRS1098748
BioProject: PRJNA297760
BioSample: SAMN04145500
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557084 358805 53460041 19.0 SRA
SRX1303784 SRP064454 RNA-Seq PAIRED
Sample: SRS1098750
BioProject: PRJNA297760
BioSample: SAMN04145501
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557085 165322 24624752 8.0 SRA
SRX1303785 SRP064454 RNA-Seq PAIRED
Sample: SRS1098749
BioProject: PRJNA297760
BioSample: SAMN04145502
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557086 268829 40053954 14.0 SRA
SRX1303786 SRP064454 RNA-Seq PAIRED
Sample: SRS1098747
BioProject: PRJNA297760
BioSample: SAMN04145503
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557087 274027 40828261 14.0 SRA
SRX1303787 SRP064454 RNA-Seq PAIRED
Sample: SRS1098746
BioProject: PRJNA297760
BioSample: SAMN04145504
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557088 337085 50223262 17.0 SRA
SRX1303788 SRP064454 RNA-Seq PAIRED
Sample: SRS1098745
BioProject: PRJNA297760
BioSample: SAMN04145505
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557089 16059476 4817842800 2143.0 SRA
SRX1303789 SRP064454 RNA-Seq PAIRED
Sample: SRS1098744
BioProject: PRJNA297760
BioSample: SAMN04145506
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557090 25600120 3840018000 1740.0 SRA
SRX1303790 SRP064454 RNA-Seq PAIRED
Sample: SRS1098742
BioProject: PRJNA297760
BioSample: SAMN04145507
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557091 16990835 5097250500 2273.0 SRA
SRX1303791 SRP064454 RNA-Seq PAIRED
Sample: SRS1098743
BioProject: PRJNA297760
BioSample: SAMN04145508
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557092 25356608 7606982400 3367.0 SRA
SRX1303792 SRP064454 RNA-Seq PAIRED
Sample: SRS1098741
BioProject: PRJNA297760
BioSample: SAMN04145509
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557093 4334592 1300377600 555.0 SRA
SRX1303793 SRP064454 RNA-Seq PAIRED
Sample: SRS1098740
BioProject: PRJNA297760
BioSample: SAMN04145510
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557094 19294850 5788455000 2551.0 SRA
SRX1303794 SRP064454 RNA-Seq PAIRED
Sample: SRS1098739
BioProject: PRJNA297760
BioSample: SAMN04145511
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557095 19268507 5780552100 2428.0 SRA
SRX1303795 SRP064454 RNA-Seq PAIRED
Sample: SRS1098738
BioProject: PRJNA297760
BioSample: SAMN04145512
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557096 21859084 6557725200 2721.0 SRA
SRX1303796 SRP064454 RNA-Seq PAIRED
Sample: SRS1098737
BioProject: PRJNA297760
BioSample: SAMN04145513
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557097 17355740 5206722000 2304.0 SRA
SRX1303797 SRP064454 RNA-Seq PAIRED
Sample: SRS1098736
BioProject: PRJNA297760
BioSample: SAMN04145514
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557098 13315800 3994740000 1665.0 SRA
SRX1303798 SRP064454 RNA-Seq PAIRED
Sample: SRS1098735
BioProject: PRJNA297760
BioSample: SAMN04145515
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557099 19791939 5937581700 2478.0 SRA
SRX1303799 SRP064454 RNA-Seq PAIRED
Sample: SRS1098733
BioProject: PRJNA297760
BioSample: SAMN04145516
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557100 23651377 7095413100 2972.0 SRA
SRX1303800 SRP064454 RNA-Seq PAIRED
Sample: SRS1098734
BioProject: PRJNA297760
BioSample: SAMN04145517
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557101 21284405 6385321500 2923.0 SRA
SRX1303801 SRP064454 RNA-Seq PAIRED
Sample: SRS1098732
BioProject: PRJNA297760
BioSample: SAMN04145518
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557102 18424457 5527337100 2459.0 SRA
SRX1303802 SRP064454 RNA-Seq PAIRED
Sample: SRS1098730
BioProject: PRJNA297760
BioSample: SAMN04145519
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557103 24850718 3727607700 1676.0 SRA
SRX1303803 SRP064454 RNA-Seq PAIRED
Sample: SRS1098731
BioProject: PRJNA297760
BioSample: SAMN04145520
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557104 19371558 5811467400 2621.0 SRA
SRX1303804 SRP064454 RNA-Seq PAIRED
Sample: SRS1098729
BioProject: PRJNA297760
BioSample: SAMN04145523
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557105 17102600 5130780000 2319.0 SRA
SRX1303805 SRP064454 RNA-Seq PAIRED
Sample: SRS1098727
BioProject: PRJNA297760
BioSample: SAMN04145524
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557106 24807173 7442151900 2996.0 SRA
SRX1303806 SRP064454 RNA-Seq PAIRED
Sample: SRS1098728
BioProject: PRJNA297760
BioSample: SAMN04145525
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557107 19314302 5794290600 2585.0 SRA
SRX1303807 SRP064454 RNA-Seq PAIRED
Sample: SRS1098726
BioProject: PRJNA297760
BioSample: SAMN04145526
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557108 19869687 5960906100 2623.0 SRA
SRX1303808 SRP064454 RNA-Seq PAIRED
Sample: SRS1098725
BioProject: PRJNA297760
BioSample: SAMN04145527
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Mus musculus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557109 23020634 6906190200 3119.0 SRA
SRX1303809 SRP064454 RNA-Seq PAIRED
Sample: SRS1098724
BioProject: PRJNA297760
BioSample: SAMN04145533
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Mus musculus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557110 19073437 5722031100 2531.0 SRA
SRX1303810 SRP064454 RNA-Seq PAIRED
Sample: SRS1098723
BioProject: PRJNA297760
BioSample: SAMN04145534
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Mus musculus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557111 18005183 5401554900 2401.0 SRA
SRX1303811 SRP064454 RNA-Seq PAIRED
Sample: SRS1098722
BioProject: PRJNA297760
BioSample: SAMN04145535
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Mus musculus
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557112 19232594 5769778200 2554.0 SRA
SRX1303812 SRP064454 RNA-Seq PAIRED
Sample: SRS1098721
BioProject: PRJNA297760
BioSample: SAMN04145521
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557113 5785510 1735653000 758.0 SRA
SRX1303813 SRP064454 RNA-Seq PAIRED
Sample: SRS1098720
BioProject: PRJNA297760
BioSample: SAMN04145522
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557114 5584825 1675447500 708.0 SRA
SRX1303814 SRP064454 RNA-Seq PAIRED
Sample: SRS1098719
BioProject: PRJNA297760
BioSample: SAMN04145540
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557115 19477246 5843173800 2446.0 SRA
SRX1303815 SRP064454 RNA-Seq PAIRED
Sample: SRS1098718
BioProject: PRJNA297760
BioSample: SAMN04145541
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557116 21085336 6325600800 2633.0 SRA
SRX1303816 SRP064454 RNA-Seq PAIRED
Sample: SRS1098716
BioProject: PRJNA297760
BioSample: SAMN04145542
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557117 7434502 2230350600 950.0 SRA
SRX1303817 SRP064454 RNA-Seq PAIRED
Sample: SRS1098715
BioProject: PRJNA297760
BioSample: SAMN04145543
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557118 24903040 7470912000 3100.0 SRA
SRX1303818 SRP064454 RNA-Seq PAIRED
Sample: SRS1098717
BioProject: PRJNA297760
BioSample: SAMN04145536
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557119 6195003 1858500900 798.0 SRA
SRX1303819 SRP064454 RNA-Seq PAIRED
Sample: SRS1098714
BioProject: PRJNA297760
BioSample: SAMN04145537
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557120 23259402 6977820600 2721.0 SRA
SRX1303820 SRP064454 RNA-Seq PAIRED
Sample: SRS1098713
BioProject: PRJNA297760
BioSample: SAMN04145538
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557121 20995851 6298755300 2468.0 SRA
SRX1303821 SRP064454 RNA-Seq PAIRED
Sample: SRS1098712
BioProject: PRJNA297760
BioSample: SAMN04145539
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557122 18276004 5482801200 2469.0 SRA
SRX1303822 SRP064454 RNA-Seq PAIRED
Sample: SRS1098711
BioProject: PRJNA297760
BioSample: SAMN04145528
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557123 32674809 4901221350 2229.0 SRA
SRX1303823 SRP064454 RNA-Seq PAIRED
Sample: SRS1098710
BioProject: PRJNA297760
BioSample: SAMN04145529
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557124 22814083 3422112450 1084.0 SRA
SRX1303824 SRP064454 RNA-Seq PAIRED
Sample: SRS1098708
BioProject: PRJNA297760
BioSample: SAMN04145530
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557125 22888354 3433253100 1082.0 SRA
SRX1303825 SRP064454 RNA-Seq PAIRED
Sample: SRS1098709
BioProject: PRJNA297760
BioSample: SAMN04145531
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557126 27951480 4192722000 1335.0 SRA
SRX1303826 SRP064454 RNA-Seq PAIRED
Sample: SRS1098707
BioProject: PRJNA297760
BioSample: SAMN04145532
Platform: ILLUMINA
Instrument: NextSeq 500
Organism: Homo sapiens
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR2557127 4499531 674929650 214.0 SRA

Potentially Related Publications (1)

This accession was text-mined from the PMC full text of these publications. It may be referenced for comparison or reused from another study rather than generated for them.

ARID5A RNA-binding coordinates microglial defense and ferroptosis in iPSC-derived models.
Nature communications · 2026

Data Files (45)

Accession File Name Stored Type Output Type Mapping Assembly Size Download
— SRR2557083_GSM1901303 RNA-Seq 25.0 MB link
— SRR2557084_GSM1901304 RNA-Seq 19.0 MB link
— SRR2557085_GSM1901305 RNA-Seq 8.0 MB link
— SRR2557086_GSM1901306 RNA-Seq 14.0 MB link
— SRR2557087_GSM1901307 RNA-Seq 14.0 MB link
— SRR2557088_GSM1901308 RNA-Seq 17.0 MB link
— SRR2557089_GSM1901309 RNA-Seq 2.1 GB link
— SRR2557090_GSM1901310 RNA-Seq 1.7 GB link
— SRR2557091_GSM1901311 RNA-Seq 2.2 GB link
— SRR2557092_GSM1901312 RNA-Seq 3.3 GB link
— SRR2557093_GSM1901313 RNA-Seq 555.0 MB link
— SRR2557094_GSM1901314 RNA-Seq 2.5 GB link
— SRR2557095_GSM1901315 RNA-Seq 2.4 GB link
— SRR2557096_GSM1901316 RNA-Seq 2.7 GB link
— SRR2557097_GSM1901317 RNA-Seq 2.2 GB link
— SRR2557098_GSM1901318 RNA-Seq 1.6 GB link
— SRR2557099_GSM1901319 RNA-Seq 2.4 GB link
— SRR2557100_GSM1901320 RNA-Seq 2.9 GB link
— SRR2557101_GSM1901321 RNA-Seq 2.9 GB link
— SRR2557102_GSM1901322 RNA-Seq 2.4 GB link
— SRR2557103_GSM1901323 RNA-Seq 1.6 GB link
— SRR2557104_GSM1901324 RNA-Seq 2.6 GB link
— SRR2557105_GSM1901325 RNA-Seq 2.3 GB link
— SRR2557106_GSM1901326 RNA-Seq 2.9 GB link
— SRR2557107_GSM1901327 RNA-Seq 2.5 GB link
— SRR2557108_GSM1901328 RNA-Seq 2.6 GB link
— SRR2557109_GSM1901329 RNA-Seq 3.0 GB link
— SRR2557110_GSM1901330 RNA-Seq 2.5 GB link
— SRR2557111_GSM1901331 RNA-Seq 2.3 GB link
— SRR2557112_GSM1901332 RNA-Seq 2.5 GB link
— SRR2557113_GSM1901333 RNA-Seq 758.0 MB link
— SRR2557114_GSM1901334 RNA-Seq 708.0 MB link
— SRR2557115_GSM1901335 RNA-Seq 2.4 GB link
— SRR2557116_GSM1901336 RNA-Seq 2.6 GB link
— SRR2557117_GSM1901337 RNA-Seq 950.0 MB link
— SRR2557118_GSM1901338 RNA-Seq 3.0 GB link
— SRR2557119_GSM1901339 RNA-Seq 798.0 MB link
— SRR2557120_GSM1901340 RNA-Seq 2.7 GB link
— SRR2557121_GSM1901341 RNA-Seq 2.4 GB link
— SRR2557122_GSM1901342 RNA-Seq 2.4 GB link
— SRR2557123_GSM1901343 RNA-Seq 2.2 GB link
— SRR2557124_GSM1901344 RNA-Seq 1.1 GB link
— SRR2557125_GSM1901345 RNA-Seq 1.1 GB link
— SRR2557126_GSM1901346 RNA-Seq 1.3 GB link
— SRR2557127_GSM1901347 RNA-Seq 214.0 MB link