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GSE249246

GSE GEO
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Integrated multi-omics analysis of zinc finger proteins uncovers roles in RNA regulation [eCLIP]

Organism: Homo sapiens
Platform: GPL24676
Samples: 134
Experiment Types:
Other
Submitted: Dec 04 2023
Last Updated: Jan 03 2025
Status: Public on Sep 20 2024
Contact: Brian,,Yee (UCSD)

Relations

SubSeries of: GSE249247 BioProject: https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1048316

Summary

RNA interactome studies have revealed that hundreds of zinc finger proteins (ZFPs) are candidate RNA-binding proteins (RBPs), despite being annotated as DNA-interacting transcription factors. The RNA substrates of ZFPs and the functional significance of their potential roles as DNA- and RNA-binding proteins (DRBPs) remain largely uncharacterized. Here we present a systematic multi-omics analysis of the DNA and RNA binding targets and regulatory roles of more than 100 ZFPs representing 37 zinc finger families. We show that multiple ZFPs are novel regulators of RNA splicing, polyadenylation, or stability. The examined ZFPs show widespread sequence-specific RNA binding ability and preferentially bind proximal to transcription start sites. Additionally, several ZFPs are DRBPs that bind their targets at both the DNA and RNA levels. We highlight ZNF277, a C2H2 ZFP that binds thousands of RNA targets and acts as a multi-functional RBP. We also show that ZNF473 is a DRBP that regulates the expression and splicing of cell cycle genes. Our results reveal diverse roles for ZFPs in transcriptional and post-transcriptional gene regulation, shedding light on a large class of under-studied RBPs.

Overall Design

Enhanced immunoprecipitation and crosslinking followed by sequencing (eCLIP-seq) of V5-tagged zinc fingerp proteins expressed in HEK293T cells.

Analysis (3 steps)

View Data Processing
Processing steps for GSE249246
  1. *library strategy: eCLIP-seq
  2. eCLIP data was analyzed using Skipper with default settings.
  3. The kDa of each ORF was matched to the closest input sample beginning at that range; for example, a 78 kDa ORF would be paired with the input sample covering the range of 75 to 150 kDa.

Supplementary Files (7)

GSE249246_CISD2_DEL.reproducible_enriched_windows.tsv.gz Download
GSE249246_CNBP_DEL.reproducible_enriched_windows.tsv.gz Download
GSE249246_RAW.tar Download
GSE249246_ZNF277_DEL.reproducible_enriched_windows.tsv.gz Download
GSE249246_ZNF277_N.reproducible_enriched_windows.tsv.gz Download
GSE249246_ZNF473_N.reproducible_enriched_windows.tsv.gz Download
GSE249246_ZNF593_DEL.reproducible_enriched_windows.tsv.gz Download
GEO Samples (134)
GSM7932051 GSM7932052 GSM7932053 GSM7932054 GSM7932055 GSM7932056 GSM7932057 GSM7932058 GSM7932059 GSM7932060 GSM7932061 GSM7932062 GSM7932063 GSM7932064 GSM7932065 GSM7932066 GSM7932067 GSM7932068 GSM7932069 GSM7932070 GSM7932071 GSM7932072 GSM7932073 GSM7932074 GSM7932075 GSM7932076 GSM7932077 GSM7932078 GSM7932079 GSM7932080 GSM7932081 GSM7932082 GSM7932083 GSM7932084 GSM7932085 GSM7932086 GSM7932087 GSM7932088 GSM7932089 GSM7932090 GSM7932091 GSM7932092 GSM7932093 GSM7932094 GSM7932095 GSM7932096 GSM7932097 GSM7932098 GSM7932099 GSM7932100 GSM7932101 GSM7932102 GSM7932103 GSM7932104 GSM7932105 GSM7932106 GSM7932107 GSM7932108 GSM7932109 GSM7932110 GSM7932111 GSM7932112 GSM7932113 GSM7932114 GSM7932115 GSM7932116 GSM7932117 GSM7932118 GSM7932119 GSM7932120 GSM7932121 GSM7932122 GSM7932123 GSM7932124 GSM7932125 GSM7932126 GSM7932127 GSM7932128 GSM7932129 GSM7932130 GSM7932131 GSM7932132 GSM7932133 GSM7932134 GSM7932135 GSM7932136 GSM7932137 GSM7932138 GSM7932139 GSM7932140 GSM7932141 GSM7932142 GSM7932143 GSM7932144 GSM7932145 GSM7932146 GSM7932147 GSM7932148 GSM7932149 GSM7932150 GSM7932151 GSM7932152 GSM7932153 GSM7932154 GSM7932155 GSM7932156 GSM7932157 GSM7932158 GSM7932159 GSM7932160 GSM7932161 GSM7932162 GSM7932163 GSM7932164 GSM7932165 GSM7932166 GSM7932167 GSM7932168 GSM8302061 GSM8302062 GSM8302063 GSM8302064 GSM8302065 GSM8302066 GSM8302067 GSM8302068 GSM8302069 GSM8302070 GSM8302071 GSM8302072 GSM8302073 GSM8302074 GSM8302075 GSM8302076

Dataset Citations (1)

Integrated multi-omics analysis of zinc-finger proteins uncovers roles in RNA regulation.
PMID 39303722 · 2024 · Molecular cell
Maya L Gosztyla, Lijun Zhan, Sara Olson, Xintao Wei, Jack Naritomi, Grady Nguyen, Lena Street, Grant A Goda, Francisco F Cavazos, Jonathan C Schmok, Manya Jain, Easin Uddin Syed, Eunjeong Kwon, Wenhao Jin, Eric Kofman, Alexandra T Tankka, Allison Li, Valerie Gonzalez, Eric Lécuyer, Daniel Dominguez, Marko Jovanovic, Brenton R Graveley, Gene W Yeo

SRA Experiments (134) and Runs (134)

Total: 129943 MB
SRX22725827 SRP475592 RIP-Seq SINGLE
GSM7932051: APEX2 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714875
BioProject: PRJNA1048316
BioSample: SAMN38611543
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: APEX2
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034137 12981221 1311103321 407.96 APEX2_IP1_S5_L001_R1_001.fastq.gz, SRR27034137, SRR27034137.lite SRA
SRX22725828 SRP475592 RIP-Seq SINGLE
GSM7932052: APEX2 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714876
BioProject: PRJNA1048316
BioSample: SAMN38611542
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: APEX2
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034136 14368547 1451223247 442.82 APEX2_IP2_S6_L001_R1_001.fastq.gz, SRR27034136, SRR27034136.lite SRA
SRX22725829 SRP475592 RIP-Seq SINGLE
GSM7932053: BRCA1 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714877
BioProject: PRJNA1048316
BioSample: SAMN38611541
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: BRCA1
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034135 28137779 2841915679 879.05 BRCA1IP1_S38_L002_R1_001.fastq.gz, SRR27034135, SRR27034135.lite SRA
SRX22725830 SRP475592 RIP-Seq SINGLE
GSM7932054: BRCA1 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714878
BioProject: PRJNA1048316
BioSample: SAMN38611540
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: BRCA1
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034106 29139235 2943062735 912.46 BRCA1IP2_S39_L002_R1_001.fastq.gz, SRR27034106, SRR27034106.lite SRA
SRX22725831 SRP475592 RIP-Seq SINGLE
GSM7932111: ZC3HAV1 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714879
BioProject: PRJNA1048316
BioSample: SAMN38611483
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZC3HAV1
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034133 31618139 3193432039 977.27 ZC3HAV1_IP1_S23_L004_R1_001.fastq.gz, SRR27034133, SRR27034133.lite SRA
SRX22725832 SRP475592 RIP-Seq SINGLE
GSM7932112: ZC3HAV1 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714880
BioProject: PRJNA1048316
BioSample: SAMN38611482
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZC3HAV1
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034132 14469655 1461435155 458.32 ZC3HAV1_IP2_S24_L004_R1_001.fastq.gz, SRR27034132, SRR27034132.lite SRA
SRX22725833 SRP475592 RIP-Seq SINGLE
GSM7932113: ZFP36L1 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714881
BioProject: PRJNA1048316
BioSample: SAMN38611481
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZFP36L1
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034131 36316357 3667952057 1125.29 ZFP36L1-IP1_S28_R1_001.fastq.gz, SRR27034131, SRR27034131.lite SRA
SRX22725834 SRP475592 RIP-Seq SINGLE
GSM7932114: ZFP36L1 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714882
BioProject: PRJNA1048316
BioSample: SAMN38611480
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZFP36L1
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034130 59274996 5986774596 1844.42 ZFP36L1-IP2_S29_R1_001.fastq.gz, SRR27034130, SRR27034130.lite SRA
SRX22725835 SRP475592 RIP-Seq SINGLE
GSM7932115: ZMAT3 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714883
BioProject: PRJNA1048316
BioSample: SAMN38611479
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZMAT3
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034129 17252297 1742481997 530.24 ZMAT3_IP1_S11_L001_R1_001.fastq.gz, SRR27034129, SRR27034129.lite SRA
SRX22725836 SRP475592 RIP-Seq SINGLE
GSM7932116: ZMAT3 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714884
BioProject: PRJNA1048316
BioSample: SAMN38611478
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZMAT3
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034128 13122510 1325373510 404.17 ZMAT3_IP2_S12_L001_R1_001.fastq.gz, SRR27034128, SRR27034128.lite SRA
SRX22725837 SRP475592 RIP-Seq SINGLE
GSM7932117: ZMAT5 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714885
BioProject: PRJNA1048316
BioSample: SAMN38611477
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZMAT5
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034127 31109434 3142052834 1001.48 ZMAT5_IP1_S25_L004_R1_001.fastq.gz, SRR27034127, SRR27034127.lite SRA
SRX22725838 SRP475592 RIP-Seq SINGLE
GSM7932118: ZMAT5 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714886
BioProject: PRJNA1048316
BioSample: SAMN38611476
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZMAT5
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034126 21444223 2165866523 694.68 ZMAT5_IP2_S26_L004_R1_001.fastq.gz, SRR27034126, SRR27034126.lite SRA
SRX22725839 SRP475592 RIP-Seq SINGLE
GSM7932119: ZNF2 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714887
BioProject: PRJNA1048316
BioSample: SAMN38611475
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF2
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034125 20614859 2082100759 633.49 ZNF2_IP1_S33_L002_R1_001.fastq.gz, SRR27034125, SRR27034125.lite SRA
SRX22725840 SRP475592 RIP-Seq SINGLE
GSM7932120: ZNF2 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714888
BioProject: PRJNA1048316
BioSample: SAMN38611474
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF2
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034124 53837441 5437581541 1719.83 ZNF2_IP2_S34_L002_R1_001.fastq.gz, SRR27034124, SRR27034124.lite SRA
SRX22725841 SRP475592 RIP-Seq SINGLE
GSM7932121: ZNF22 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714889
BioProject: PRJNA1048316
BioSample: SAMN38611473
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF22
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034123 20383696 2058753296 618.18 ZNF22_IP1_S48_L002_R1_001.fastq.gz, SRR27034123, SRR27034123.lite SRA
SRX22725842 SRP475592 RIP-Seq SINGLE
GSM7932122: ZNF22 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714890
BioProject: PRJNA1048316
BioSample: SAMN38611472
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF22
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034122 26732896 2700022496 804.7 ZNF22_IP2_S49_L002_R1_001.fastq.gz, SRR27034122, SRR27034122.lite SRA
SRX22725843 SRP475592 RIP-Seq SINGLE
GSM7932123: ZNF277 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714891
BioProject: PRJNA1048316
BioSample: SAMN38611471
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF277
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034121 20794909 2100285809 669.45 ZNF277_IP1_S27_L004_R1_001.fastq.gz, SRR27034121, SRR27034121.lite SRA
SRX22725844 SRP475592 RIP-Seq SINGLE
GSM7932124: ZNF277 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714892
BioProject: PRJNA1048316
BioSample: SAMN38611470
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF277
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034120 30692728 3099965528 992.71 ZNF277_IP2_S28_L004_R1_001.fastq.gz, SRR27034120, SRR27034120.lite SRA
SRX22725845 SRP475592 RIP-Seq SINGLE
GSM7932125: ZNF317 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714893
BioProject: PRJNA1048316
BioSample: SAMN38611469
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF317
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034119 31185811 3149766911 1002.31 ZNF317_IP1_S29_L004_R1_001.fastq.gz, SRR27034119, SRR27034119.lite SRA
SRX22725846 SRP475592 RIP-Seq SINGLE
GSM7932126: ZNF317 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714894
BioProject: PRJNA1048316
BioSample: SAMN38611468
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF317
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034118 27289352 2756224552 877.98 ZNF317_IP2_S30_L004_R1_001.fastq.gz, SRR27034118, SRR27034118.lite SRA
SRX22725847 SRP475592 RIP-Seq SINGLE
GSM7932127: ZNF473 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714895
BioProject: PRJNA1048316
BioSample: SAMN38611467
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF473
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034117 22132428 2235375228 705.99 ZNF473IP1_S36_L002_R1_001.fastq.gz, SRR27034117, SRR27034117.lite SRA
SRX22725848 SRP475592 RIP-Seq SINGLE
GSM7932128: ZNF473 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714896
BioProject: PRJNA1048316
BioSample: SAMN38611466
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF473
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034116 23856131 2409469231 771.22 ZNF473IP2_S37_L002_R1_001.fastq.gz, SRR27034116, SRR27034116.lite SRA
SRX22725849 SRP475592 RIP-Seq SINGLE
GSM7932129: ZNF574 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714897
BioProject: PRJNA1048316
BioSample: SAMN38611465
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF574
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034115 26026858 2628712658 792.51 ZNF574_IP1_S3_L001_R1_001.fastq.gz, SRR27034115, SRR27034115.lite SRA
SRX22725850 SRP475592 RIP-Seq SINGLE
GSM7932130: ZNF574 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714898
BioProject: PRJNA1048316
BioSample: SAMN38611464
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF574
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034114 25885910 2614476910 784.47 ZNF574_IP2_S4_L001_R1_001.fastq.gz, SRR27034114, SRR27034114.lite SRA
SRX22725851 SRP475592 RIP-Seq SINGLE
GSM7932131: ZNF593 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714899
BioProject: PRJNA1048316
BioSample: SAMN38611463
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF593
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034113 27392469 2766639369 836.28 ZNF593_IP1_S52_L002_R1_001.fastq.gz, SRR27034113, SRR27034113.lite SRA
SRX22725852 SRP475592 RIP-Seq SINGLE
GSM7932132: ZNF593 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714900
BioProject: PRJNA1048316
BioSample: SAMN38611462
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF593
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034112 33604938 3394098738 1015.67 ZNF593_IP2_S53_L002_R1_001.fastq.gz, SRR27034112, SRR27034112.lite SRA
SRX22725853 SRP475592 RIP-Seq SINGLE
GSM7932133: ZNF706 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714901
BioProject: PRJNA1048316
BioSample: SAMN38611461
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF706
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034111 27149189 2742068089 871.13 ZNF706_IP1_S31_L004_R1_001.fastq.gz, SRR27034111, SRR27034111.lite SRA
SRX22725854 SRP475592 RIP-Seq SINGLE
GSM7932134: ZNF706 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714902
BioProject: PRJNA1048316
BioSample: SAMN38611460
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF706
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034110 17353634 1752717034 561.47 ZNF706_IP2_S32_L004_R1_001.fastq.gz, SRR27034110, SRR27034110.lite SRA
SRX22725855 SRP475592 RIP-Seq SINGLE
GSM7932135: ZNF800 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714903
BioProject: PRJNA1048316
BioSample: SAMN38611459
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF800
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034109 21585314 2180116714 667.83 ZNF800_IP1_S15_L004_R1_001.fastq.gz, SRR27034109, SRR27034109.lite SRA
SRX22725856 SRP475592 RIP-Seq SINGLE
GSM7932136: ZNF800 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714904
BioProject: PRJNA1048316
BioSample: SAMN38611458
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF800
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034108 28837008 2912537808 897.51 ZNF800_IP2_S16_L004_R1_001.fastq.gz, SRR27034108, SRR27034108.lite SRA
SRX22725857 SRP475592 RIP-Seq SINGLE
GSM7932137: V5_100_to_225 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714905
BioProject: PRJNA1048316
BioSample: SAMN38611457
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: V5_100_to_225
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034107 57391632 5796554832 1794.66 V5_100_to_225_IP1.fastq.gz, SRR27034107, SRR27034107.lite SRA
SRX22725858 SRP475592 RIP-Seq SINGLE
GSM7932138: V5_100_to_225 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714906
BioProject: PRJNA1048316
BioSample: SAMN38611456
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: V5_100_to_225
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034047 62224510 6284675510 1942.31 V5_100_to_225_IP2.fastq.gz, SRR27034047, SRR27034047.lite SRA
SRX22725859 SRP475592 RIP-Seq SINGLE
GSM7932055: CISD1 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714907
BioProject: PRJNA1048316
BioSample: SAMN38611539
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: CISD1
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034105 20377965 2058174465 622.65 CISD1_IP1_S36_L002_R1_001.fastq.gz, SRR27034105, SRR27034105.lite SRA
SRX22725860 SRP475592 RIP-Seq SINGLE
GSM7932056: CISD1 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714908
BioProject: PRJNA1048316
BioSample: SAMN38611538
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: CISD1
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034104 20753877 2096141577 628.94 CISD1_IP2_S37_L002_R1_001.fastq.gz, SRR27034104, SRR27034104.lite SRA
SRX22725861 SRP475592 RIP-Seq SINGLE
GSM7932057: CISD2 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714909
BioProject: PRJNA1048316
BioSample: SAMN38611537
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: CISD2
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034103 18917679 1910685579 588.58 CISD2_IP1_S36_L002_R1_001.fastq.gz, SRR27034103, SRR27034103.lite SRA
SRX22725862 SRP475592 RIP-Seq SINGLE
GSM7932058: CISD2 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714910
BioProject: PRJNA1048316
BioSample: SAMN38611536
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: CISD2
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034102 16932714 1710204114 523.96 CISD2_IP2_S37_L002_R1_001.fastq.gz, SRR27034102, SRR27034102.lite SRA
SRX22725863 SRP475592 RIP-Seq SINGLE
GSM7932059: CNBP replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714911
BioProject: PRJNA1048316
BioSample: SAMN38611535
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: CNBP
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034101 21795748 2201370548 674.92 CNBP_IP1_S34_L002_R1_001.fastq.gz, SRR27034101, SRR27034101.lite SRA
SRX22725864 SRP475592 RIP-Seq SINGLE
GSM7932060: CNBP replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714912
BioProject: PRJNA1048316
BioSample: SAMN38611534
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: CNBP
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034100 15626843 1578311143 481.82 CNBP_IP2_S35_L002_R1_001.fastq.gz, SRR27034100, SRR27034100.lite SRA
SRX22725865 SRP475592 RIP-Seq SINGLE
GSM7932061: CNOT4 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714913
BioProject: PRJNA1048316
BioSample: SAMN38611533
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: CNOT4
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034099 19637436 1983381036 615.28 CNOT4IP1_S40_L002_R1_001.fastq.gz, SRR27034099, SRR27034099.lite SRA
SRX22725866 SRP475592 RIP-Seq SINGLE
GSM7932062: CNOT4 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714914
BioProject: PRJNA1048316
BioSample: SAMN38611532
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: CNOT4
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034098 73620806 7435701406 2258.62 CNOT4IP2_S41_L002_R1_001.fastq.gz, SRR27034098, SRR27034098.lite SRA
SRX22725867 SRP475592 RIP-Seq SINGLE
GSM7932063: CPS4L replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714916
BioProject: PRJNA1048316
BioSample: SAMN38611531
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: CPS4L
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034097 48623796 4911003396 1471.29 CPS4L_IP1_S37_L002_R1_001.fastq.gz, SRR27034097, SRR27034097.lite SRA
SRX22725868 SRP475592 RIP-Seq SINGLE
GSM7932064: CPS4L replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714915
BioProject: PRJNA1048316
BioSample: SAMN38611530
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: CPS4L
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034096 53399776 5393377376 1669.69 CPS4L_IP2_S38_L002_R1_001.fastq.gz, SRR27034096, SRR27034096.lite SRA
SRX22725869 SRP475592 RIP-Seq SINGLE
GSM7932065: CPSF4 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714917
BioProject: PRJNA1048316
BioSample: SAMN38611529
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: CPSF4
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034095 19527060 1972233060 612.34 CPSF4_IP1_S26_L002_R1_001.fastq.gz, SRR27034095, SRR27034095.lite SRA
SRX22725870 SRP475592 RIP-Seq SINGLE
GSM7932066: CPSF4 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714918
BioProject: PRJNA1048316
BioSample: SAMN38611528
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: CPSF4
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034094 11557309 1167288209 361.37 CPSF4_IP2_S27_L002_R1_001.fastq.gz, SRR27034094, SRR27034094.lite SRA
SRX22725871 SRP475592 RIP-Seq SINGLE
GSM7932067: CTCF replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714919
BioProject: PRJNA1048316
BioSample: SAMN38611527
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: CTCF
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034093 45039698 4549009498 1415.02 CTCF_IP1_S13_L004_R1_001.fastq.gz, SRR27034093, SRR27034093.lite SRA
SRX22725872 SRP475592 RIP-Seq SINGLE
GSM7932068: CTCF replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714920
BioProject: PRJNA1048316
BioSample: SAMN38611526
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: CTCF
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034092 20857959 2106653859 668.13 CTCF_IP2_S14_L004_R1_001.fastq.gz, SRR27034092, SRR27034092.lite SRA
SRX22725873 SRP475592 RIP-Seq SINGLE
GSM7932069: ERI2 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714921
BioProject: PRJNA1048316
BioSample: SAMN38611525
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ERI2
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034091 11278386 1139116986 351.02 ERI2_IP1_S3_L001_R1_001.fastq.gz, SRR27034091, SRR27034091.lite SRA
SRX22725874 SRP475592 RIP-Seq SINGLE
GSM7932070: ERI2 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714922
BioProject: PRJNA1048316
BioSample: SAMN38611524
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ERI2
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034090 13333609 1346694509 430.48 ERI2_IP2_S4_L001_R1_001.fastq.gz, SRR27034090, SRR27034090.lite SRA
SRX22725875 SRP475592 RIP-Seq SINGLE
GSM7932071: FUS replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714923
BioProject: PRJNA1048316
BioSample: SAMN38611523
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: FUS
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034089 49596971 5009294071 1522.17 FUS_IP1_S31_L002_R1_001.fastq.gz, SRR27034089, SRR27034089.lite SRA
SRX22725876 SRP475592 RIP-Seq SINGLE
GSM7932072: FUS replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714924
BioProject: PRJNA1048316
BioSample: SAMN38611522
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: FUS
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034088 52275024 5279777424 1653.05 FUS_IP2_S32_L002_R1_001.fastq.gz, SRR27034088, SRR27034088.lite SRA
SRX22725877 SRP475592 RIP-Seq SINGLE
GSM7932073: G2E3 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714925
BioProject: PRJNA1048316
BioSample: SAMN38611521
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: G2E3
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034087 25693593 2595052893 840.51 G2E3IP1_S34_L002_R1_001.fastq.gz, SRR27034087, SRR27034087.lite SRA
SRX22725878 SRP475592 RIP-Seq SINGLE
GSM7932074: G2E3 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714926
BioProject: PRJNA1048316
BioSample: SAMN38611520
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: G2E3
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034086 14990180 1514008180 492.13 G2E3IP2_S35_L002_R1_001.fastq.gz, SRR27034086, SRR27034086.lite SRA
SRX22725879 SRP475592 RIP-Seq SINGLE
GSM7932075: GIN1 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714927
BioProject: PRJNA1048316
BioSample: SAMN38611519
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: GIN1
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034085 25444409 2569885309 771.97 GIN1_IP1_S15_L001_R1_001.fastq.gz, SRR27034085, SRR27034085.lite SRA
SRX22725880 SRP475592 RIP-Seq SINGLE
GSM7932076: GIN1 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714928
BioProject: PRJNA1048316
BioSample: SAMN38611518
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: GIN1
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034084 29139845 2943124345 879.62 GIN1_IP2_S16_L001_R1_001.fastq.gz, SRR27034084, SRR27034084.lite SRA
SRX22725881 SRP475592 RIP-Seq SINGLE
GSM7932077: IGHMBP2 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714929
BioProject: PRJNA1048316
BioSample: SAMN38611517
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: IGHMBP2
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034083 41338251 4175163351 1299.79 IGHMBP2_IP1_S21_L004_R1_001.fastq.gz, SRR27034083, SRR27034083.lite SRA
SRX22725882 SRP475592 RIP-Seq SINGLE
GSM7932078: IGHMBP2 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714930
BioProject: PRJNA1048316
BioSample: SAMN38611516
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: IGHMBP2
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034082 51046561 5155702661 1644.64 IGHMBP2_IP2_S22_L004_R1_001.fastq.gz, SRR27034082, SRR27034082.lite SRA
SRX22725883 SRP475592 RIP-Seq SINGLE
GSM7932079: LN28B replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714931
BioProject: PRJNA1048316
BioSample: SAMN38611515
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: LN28B
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034081 19613031 1980916131 600.57 LN28B_IP1_S28_L002_R1_001.fastq.gz, SRR27034081, SRR27034081.lite SRA
SRX22725884 SRP475592 RIP-Seq SINGLE
GSM7932080: LN28B replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714932
BioProject: PRJNA1048316
BioSample: SAMN38611514
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: LN28B
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034080 16824065 1699230565 518.21 LN28B_IP2_S29_L002_R1_001.fastq.gz, SRR27034080, SRR27034080.lite SRA
SRX22725885 SRP475592 RIP-Seq SINGLE
GSM7932081: MAZ replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714933
BioProject: PRJNA1048316
BioSample: SAMN38611513
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: MAZ
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034079 44108040 4454912040 1339.24 MAZ_IP1_S39_L002_R1_001.fastq.gz, SRR27034079, SRR27034079.lite SRA
SRX22725886 SRP475592 RIP-Seq SINGLE
GSM7932082: MAZ replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714934
BioProject: PRJNA1048316
BioSample: SAMN38611512
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: MAZ
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034076 49611210 5010732210 1542.92 MAZ_IP2_S40_L002_R1_001.fastq.gz, SRR27034076, SRR27034076.lite SRA
SRX22725887 SRP475592 RIP-Seq SINGLE
GSM7932167: V5_75_to_150 replicate 1 size-matched input; Homo sapiens; RIP-Seq
Sample: SRS19714935
BioProject: PRJNA1048316
BioSample: SAMN38611427
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: V5_75_to_150
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034077 65596502 6625246702 2100.43 75_to_150_IN1.fastq.gz, SRR27034077, SRR27034077.lite SRA
SRX22725888 SRP475592 RIP-Seq SINGLE
GSM7932168: V5_75_to_150 replicate 2 size-matched input; Homo sapiens; RIP-Seq
Sample: SRS19714936
BioProject: PRJNA1048316
BioSample: SAMN38611426
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: V5_75_to_150
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034075 53906496 5444556096 1712.43 75_to_150_IN2.fastq.gz, SRR27034075, SRR27034075.lite SRA
SRX22725889 SRP475592 RIP-Seq SINGLE
GSM7932083: MBNL1 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714937
BioProject: PRJNA1048316
BioSample: SAMN38611511
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: MBNL1
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034074 35677307 3603408007 1193.45 MBNL1_IP1_S19_L004_R1_001.fastq.gz, SRR27034074, SRR27034074.lite SRA
SRX22725890 SRP475592 RIP-Seq SINGLE
GSM7932084: MBNL1 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714938
BioProject: PRJNA1048316
BioSample: SAMN38611510
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: MBNL1
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034073 51896989 5241595889 1634.94 MBNL1_IP2_S20_L004_R1_001.fastq.gz, SRR27034073, SRR27034073.lite SRA
SRX22725891 SRP475592 RIP-Seq SINGLE
GSM7932085: NANO2 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714939
BioProject: PRJNA1048316
BioSample: SAMN38611509
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: NANO2
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034072 8233058 831538858 258.06 NANO2_IP1_S9_L001_R1_001.fastq.gz, SRR27034072, SRR27034072.lite SRA
SRX22725892 SRP475592 RIP-Seq SINGLE
GSM7932086: NANO2 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714940
BioProject: PRJNA1048316
BioSample: SAMN38611508
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: NANO2
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034071 8225568 830782368 259.56 NANO2_IP2_S10_L001_R1_001.fastq.gz, SRR27034071, SRR27034071.lite SRA
SRX22725893 SRP475592 RIP-Seq SINGLE
GSM7932087: PHF7 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714942
BioProject: PRJNA1048316
BioSample: SAMN38611507
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: PHF7
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034070 33070332 3340103532 1022.84 PHF7_IP1_S39_L004_R1_001.fastq.gz, SRR27034070, SRR27034070.lite SRA
SRX22725894 SRP475592 RIP-Seq SINGLE
GSM7932088: PHF7 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714941
BioProject: PRJNA1048316
BioSample: SAMN38611506
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: PHF7
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034069 29211287 2950339987 920.89 PHF7_IP2_S40_L004_R1_001.fastq.gz, SRR27034069, SRR27034069.lite SRA
SRX22725895 SRP475592 RIP-Seq SINGLE
GSM7932089: R113A1 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714943
BioProject: PRJNA1048316
BioSample: SAMN38611505
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: R113A1
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034068 22677116 2290388716 687.94 R113A_IP1_S40_L002_R1_001.fastq.gz, SRR27034068, SRR27034068.lite SRA
SRX22725896 SRP475592 RIP-Seq SINGLE
GSM7932090: R113A1 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714944
BioProject: PRJNA1048316
BioSample: SAMN38611504
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: R113A1
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034067 19727978 1992525778 598.1 R113A_IP2_S41_L002_R1_001.fastq.gz, SRR27034067, SRR27034067.lite SRA
SRX22725897 SRP475592 RIP-Seq SINGLE
GSM7932091: RBM5 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714945
BioProject: PRJNA1048316
BioSample: SAMN38611503
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: RBM5
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034066 54823005 5537123505 1668.08 RBM5_IP1_S35_L002_R1_001.fastq.gz, SRR27034066, SRR27034066.lite SRA
SRX22725898 SRP475592 RIP-Seq SINGLE
GSM7932092: RBM5 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714946
BioProject: PRJNA1048316
BioSample: SAMN38611502
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: RBM5
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034065 50521598 5102681398 1565.36 RBM5_IP2_S36_L002_R1_001.fastq.gz, SRR27034065, SRR27034065.lite SRA
SRX22725899 SRP475592 RIP-Seq SINGLE
GSM7932093: RNF14 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714947
BioProject: PRJNA1048316
BioSample: SAMN38611501
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: RNF14
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034064 27129724 2740102124 823.85 RNF14_IIP1_S11_L001_R1_001.fastq.gz, SRR27034064, SRR27034064.lite SRA
SRX22725900 SRP475592 RIP-Seq SINGLE
GSM7932094: RNF14 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714949
BioProject: PRJNA1048316
BioSample: SAMN38611500
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: RNF14
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034063 25073790 2532452790 761.7 RNF14_IP2_S12_L001_R1_001.fastq.gz, SRR27034063, SRR27034063.lite SRA
SRX22725901 SRP475592 RIP-Seq SINGLE
GSM7932095: SALL4 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714948
BioProject: PRJNA1048316
BioSample: SAMN38611499
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: SALL4
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034062 26961085 2723069585 831.83 SALL4_IP1_S30_L002_R1_001.fastq.gz, SRR27034062, SRR27034062.lite SRA
SRX22725902 SRP475592 RIP-Seq SINGLE
GSM7932096: SALL4 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714950
BioProject: PRJNA1048316
BioSample: SAMN38611498
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: SALL4
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034061 18553777 1873931477 574.95 SALL4_IP2_S31_L002_R1_001.fastq.gz, SRR27034061, SRR27034061.lite SRA
SRX22725903 SRP475592 RIP-Seq SINGLE
GSM7932097: SNRPC replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714951
BioProject: PRJNA1048316
BioSample: SAMN38611497
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: SNRPC
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034060 22851274 2307978674 687.14 SNRPC_IP1_S44_L002_R1_001.fastq.gz, SRR27034060, SRR27034060.lite SRA
SRX22725904 SRP475592 RIP-Seq SINGLE
GSM7932098: SNRPC replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714952
BioProject: PRJNA1048316
BioSample: SAMN38611496
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: SNRPC
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034059 25804884 2606293284 774.74 SNRPC_IP2_S45_L002_R1_001.fastq.gz, SRR27034059, SRR27034059.lite SRA
SRX22725905 SRP475592 RIP-Seq SINGLE
GSM7932099: TEX13A replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714953
BioProject: PRJNA1048316
BioSample: SAMN38611495
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: TEX13A
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034058 27912444 2819156844 887.47 TEX13A_IP1_S35_L004_R1_001.fastq.gz, SRR27034058, SRR27034058.lite SRA
SRX22725906 SRP475592 RIP-Seq SINGLE
GSM7932100: TEX13A replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714954
BioProject: PRJNA1048316
BioSample: SAMN38611494
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: TEX13A
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034057 29432735 2972706235 944.03 TEX13A_IP2_S36_L004_R1_001.fastq.gz, SRR27034057, SRR27034057.lite SRA
SRX22725907 SRP475592 RIP-Seq SINGLE
GSM7932101: TF3C4 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714955
BioProject: PRJNA1048316
BioSample: SAMN38611493
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: TF3C4
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034056 34904632 3525367832 1084.03 TF3C4_IP1_S17_L004_R1_001.fastq.gz, SRR27034056, SRR27034056.lite SRA
SRX22725908 SRP475592 RIP-Seq SINGLE
GSM7932102: TF3C4 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714956
BioProject: PRJNA1048316
BioSample: SAMN38611492
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: TF3C4
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034055 32621545 3294776045 1034.3 TF3C4_IP2_S18_L004_R1_001.fastq.gz, SRR27034055, SRR27034055.lite SRA
SRX22725909 SRP475592 RIP-Seq SINGLE
GSM7932103: TRIM55 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714957
BioProject: PRJNA1048316
BioSample: SAMN38611491
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: TRIM55
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034054 19451006 1964551606 611.22 TRIM55IP1_S42_L002_R1_001.fastq.gz, SRR27034054, SRR27034054.lite SRA
SRX22725910 SRP475592 RIP-Seq SINGLE
GSM7932104: TRIM55 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714958
BioProject: PRJNA1048316
BioSample: SAMN38611490
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: TRIM55
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034053 24186506 2442837106 756.02 TRIM55IP2_S43_L002_R1_001.fastq.gz, SRR27034053, SRR27034053.lite SRA
SRX22725911 SRP475592 RIP-Seq SINGLE
GSM7932105: U2AF1 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714959
BioProject: PRJNA1048316
BioSample: SAMN38611489
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: U2AF1
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034052 12372640 1249636640 390.2 U2AF1_IP1_S34_L004_R1_001.fastq.gz, SRR27034052, SRR27034052.lite SRA
SRX22725912 SRP475592 RIP-Seq SINGLE
GSM7932106: U2AF1 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714960
BioProject: PRJNA1048316
BioSample: SAMN38611488
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: U2AF1
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034051 13490793 1362570093 421.3 U2AF1_IP2_S36_L004_R1_001.fastq.gz, SRR27034051, SRR27034051.lite SRA
SRX22725913 SRP475592 RIP-Seq SINGLE
GSM7932107: WBP4 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714961
BioProject: PRJNA1048316
BioSample: SAMN38611487
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: WBP4
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034050 12387013 1251088313 379.87 WBP4_IP1_S7_L001_R1_001.fastq.gz, SRR27034050, SRR27034050.lite SRA
SRX22725914 SRP475592 RIP-Seq SINGLE
GSM7932108: WBP4 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714962
BioProject: PRJNA1048316
BioSample: SAMN38611486
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: WBP4
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034049 11417416 1153159016 353.45 WBP4_IP2_S8_L001_R1_001.fastq.gz, SRR27034049, SRR27034049.lite SRA
SRX22725915 SRP475592 RIP-Seq SINGLE
GSM7932109: ZC3H3 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714964
BioProject: PRJNA1048316
BioSample: SAMN38611485
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZC3H3
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034048 12805969 1293402869 397.84 ZC3H3_IP1_S1_L001_R1_001.fastq.gz, SRR27034048, SRR27034048.lite SRA
SRX22725916 SRP475592 RIP-Seq SINGLE
GSM7932110: ZC3H3 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714963
BioProject: PRJNA1048316
BioSample: SAMN38611484
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZC3H3
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034134 16513062 1667819262 532.54 ZC3H3_IP2_S2_L001_R1_001.fastq.gz, SRR27034134, SRR27034134.lite SRA
SRX22725917 SRP475592 RIP-Seq SINGLE
GSM7932139: V5_125_to_225 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714965
BioProject: PRJNA1048316
BioSample: SAMN38611455
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: V5_125_to_225
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034046 38977485 3936725985 1216.84 V5_125_to_225_IP1.fastq.gz, SRR27034046, SRR27034046.lite SRA
SRX22725918 SRP475592 RIP-Seq SINGLE
GSM7932140: V5_125_to_225 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714966
BioProject: PRJNA1048316
BioSample: SAMN38611454
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: V5_125_to_225
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034045 45268245 4572092745 1410.31 V5_125_to_225_IP2.fastq.gz, SRR27034045, SRR27034045.lite SRA
SRX22725919 SRP475592 RIP-Seq SINGLE
GSM7932141: V5_150_to_225 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714967
BioProject: PRJNA1048316
BioSample: SAMN38611453
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: V5_150_to_225
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034044 20058688 2025927488 623.0 V5_150_to_225_IP1.fastq.gz, SRR27034044, SRR27034044.lite SRA
SRX22725920 SRP475592 RIP-Seq SINGLE
GSM7932142: V5_150_to_225 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714968
BioProject: PRJNA1048316
BioSample: SAMN38611452
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: V5_150_to_225
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034043 20377695 2058147195 631.9 V5_150_to_225_IP2.fastq.gz, SRR27034043, SRR27034043.lite SRA
SRX22725921 SRP475592 RIP-Seq SINGLE
GSM7932143: V5_25_to_100 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714969
BioProject: PRJNA1048316
BioSample: SAMN38611451
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: V5_25_to_100
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034042 58327766 5891104366 1855.69 V5_25_to_100_IP1.fastq.gz, SRR27034042, SRR27034042.lite SRA
SRX22725922 SRP475592 RIP-Seq SINGLE
GSM7932144: V5_25_to_100 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714970
BioProject: PRJNA1048316
BioSample: SAMN38611450
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: V5_25_to_100
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034041 67684368 6836121168 2117.78 V5_25_to_100_IP2.fastq.gz, SRR27034041, SRR27034041.lite SRA
SRX22725923 SRP475592 RIP-Seq SINGLE
GSM7932145: V5_50_to_125 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714971
BioProject: PRJNA1048316
BioSample: SAMN38611449
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: V5_50_to_125
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034040 54739969 5528736869 1722.82 V5_50_to_125_IP1.fastq.gz, SRR27034040, SRR27034040.lite SRA
SRX22725924 SRP475592 RIP-Seq SINGLE
GSM7932146: V5_50_to_125 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714972
BioProject: PRJNA1048316
BioSample: SAMN38611448
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: V5_50_to_125
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034039 60772670 6138039670 1900.73 V5_50_to_125_IP2.fastq.gz, SRR27034039, SRR27034039.lite SRA
SRX22725925 SRP475592 RIP-Seq SINGLE
GSM7932147: V5_75_to_150 replicate 1 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714973
BioProject: PRJNA1048316
BioSample: SAMN38611447
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: V5_75_to_150
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034038 56739229 5730662129 1782.78 V5_75_to_150_IP1.fastq.gz, SRR27034038, SRR27034038.lite SRA
SRX22725926 SRP475592 RIP-Seq SINGLE
GSM7932148: V5_75_to_150 replicate 2 eCLIP; Homo sapiens; RIP-Seq
Sample: SRS19714974
BioProject: PRJNA1048316
BioSample: SAMN38611446
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: V5_75_to_150
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034037 62607420 6323349420 1960.19 V5_75_to_150_IP2.fastq.gz, SRR27034037, SRR27034037.lite SRA
SRX22725927 SRP475592 RIP-Seq SINGLE
GSM7932149: ZNF473 RBD-deleted replicate 1 eCLIP input; Homo sapiens; RIP-Seq
Sample: SRS19714975
BioProject: PRJNA1048316
BioSample: SAMN38611445
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF473 RBD-deleted
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034036 17668071 1766807100 600.54 ZNF473-DEL-IN1_S25_R1_001.fastq.gz, SRR27034036, SRR27034036.lite SRA
SRX22725928 SRP475592 RIP-Seq SINGLE
GSM7932150: ZNF473 RBD-deleted replicate 2 eCLIP input; Homo sapiens; RIP-Seq
Sample: SRS19714976
BioProject: PRJNA1048316
BioSample: SAMN38611444
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF473 RBD-deleted
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034035 7799663 779966300 272.11 ZNF473-DEL-IN2_S27_R1_001.fastq.gz, SRR27034035, SRR27034035.lite SRA
SRX22725929 SRP475592 RIP-Seq SINGLE
GSM7932151: ZNF473 RBD-deleted replicate 1 eCLIP IP; Homo sapiens; RIP-Seq
Sample: SRS19714977
BioProject: PRJNA1048316
BioSample: SAMN38611443
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF473 RBD-deleted
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034034 19622166 1962216600 625.27 ZNF473-DEL-IP1_S26_R1_001.fastq.gz, SRR27034034, SRR27034034.lite SRA
SRX22725930 SRP475592 RIP-Seq SINGLE
GSM7932152: ZNF473 RBD-deleted replicate 2 eCLIP IP; Homo sapiens; RIP-Seq
Sample: SRS19714978
BioProject: PRJNA1048316
BioSample: SAMN38611442
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF473 RBD-deleted
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034033 24471103 2447110300 773.54 ZNF473-DEL-IP2_S28_R1_001.fastq.gz, SRR27034033, SRR27034033.lite SRA
SRX22725931 SRP475592 RIP-Seq SINGLE
GSM7932153: ZNF473 RBD-wild type replicate 1 eCLIP input; Homo sapiens; RIP-Seq
Sample: SRS19714980
BioProject: PRJNA1048316
BioSample: SAMN38611441
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF473 RBD-wild type
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034032 18219419 1821941900 588.42 ZNF473-WT-IN1_S21_R1_001.fastq.gz, SRR27034032, SRR27034032.lite SRA
SRX22725932 SRP475592 RIP-Seq SINGLE
GSM7932154: ZNF473 RBD-wild type replicate 2 eCLIP input; Homo sapiens; RIP-Seq
Sample: SRS19714979
BioProject: PRJNA1048316
BioSample: SAMN38611440
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF473 RBD-wild type
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034031 24718272 2471827200 808.52 ZNF473-WT-IN2_S23_R1_001.fastq.gz, SRR27034031, SRR27034031.lite SRA
SRX22725933 SRP475592 RIP-Seq SINGLE
GSM7932155: ZNF473 RBD-wild type replicate 1 eCLIP IP; Homo sapiens; RIP-Seq
Sample: SRS19714981
BioProject: PRJNA1048316
BioSample: SAMN38611439
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF473 RBD-wild type
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034030 17574469 1757446900 559.01 ZNF473-WT-IP1_S22_R1_001.fastq.gz, SRR27034030, SRR27034030.lite SRA
SRX22725934 SRP475592 RIP-Seq SINGLE
GSM7932156: ZNF473 RBD-wild type replicate 2 eCLIP IP; Homo sapiens; RIP-Seq
Sample: SRS19714982
BioProject: PRJNA1048316
BioSample: SAMN38611438
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF473 RBD-wild type
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034029 19922000 1992200000 633.82 ZNF473-WT-IP2_S24_R1_001.fastq.gz, SRR27034029, SRR27034029.lite SRA
SRX22725935 SRP475592 RIP-Seq SINGLE
GSM7932157: V5_100_to_225 replicate 1 size-matched input; Homo sapiens; RIP-Seq
Sample: SRS19714984
BioProject: PRJNA1048316
BioSample: SAMN38611437
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: V5_100_to_225
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034028 67836547 6851491247 2158.74 100_to_225_IN1.fastq.gz, SRR27034028, SRR27034028.lite SRA
SRX22725936 SRP475592 RIP-Seq SINGLE
GSM7932158: V5_100_to_225 replicate 2 size-matched input; Homo sapiens; RIP-Seq
Sample: SRS19714983
BioProject: PRJNA1048316
BioSample: SAMN38611436
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: V5_100_to_225
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034027 56909212 5747830412 1799.84 100_to_225_IN2.fastq.gz, SRR27034027, SRR27034027.lite SRA
SRX22725937 SRP475592 RIP-Seq SINGLE
GSM7932159: V5_125_to_225 replicate 1 size-matched input; Homo sapiens; RIP-Seq
Sample: SRS19714985
BioProject: PRJNA1048316
BioSample: SAMN38611435
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: V5_125_to_225
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034026 49568672 5006435872 1575.24 125_to_225_IN1.fastq.gz, SRR27034026, SRR27034026.lite SRA
SRX22725938 SRP475592 RIP-Seq SINGLE
GSM7932160: V5_125_to_225 replicate 2 size-matched input; Homo sapiens; RIP-Seq
Sample: SRS19714986
BioProject: PRJNA1048316
BioSample: SAMN38611434
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: V5_125_to_225
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034025 43510321 4394542421 1374.44 125_to_225_IN2.fastq.gz, SRR27034025, SRR27034025.lite SRA
SRX22725939 SRP475592 RIP-Seq SINGLE
GSM7932161: V5_150_to_225 replicate 1 size-matched input; Homo sapiens; RIP-Seq
Sample: SRS19714987
BioProject: PRJNA1048316
BioSample: SAMN38611433
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: V5_150_to_225
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034024 22497054 2272202454 707.22 150_to_225_IN1.fastq.gz, SRR27034024, SRR27034024.lite SRA
SRX22725940 SRP475592 RIP-Seq SINGLE
GSM7932162: V5_150_to_225 replicate 2 size-matched input; Homo sapiens; RIP-Seq
Sample: SRS19714988
BioProject: PRJNA1048316
BioSample: SAMN38611432
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: V5_150_to_225
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034023 22416450 2264061450 707.13 150_to_225_IN2.fastq.gz, SRR27034023, SRR27034023.lite SRA
SRX22725941 SRP475592 RIP-Seq SINGLE
GSM7932163: V5_25_to_100 replicate 1 size-matched input; Homo sapiens; RIP-Seq
Sample: SRS19714989
BioProject: PRJNA1048316
BioSample: SAMN38611431
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: V5_25_to_100
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034022 59285862 5987872062 1898.59 25_to_100_IN1.fastq.gz, SRR27034022, SRR27034022.lite SRA
SRX22725942 SRP475592 RIP-Seq SINGLE
GSM7932164: V5_25_to_100 replicate 2 size-matched input; Homo sapiens; RIP-Seq
Sample: SRS19714991
BioProject: PRJNA1048316
BioSample: SAMN38611430
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: V5_25_to_100
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034021 64743347 6539078047 2064.9 25_to_100_IN2.fastq.gz, SRR27034021, SRR27034021.lite SRA
SRX22725943 SRP475592 RIP-Seq SINGLE
GSM7932165: V5_50_to_125 replicate 1 size-matched input; Homo sapiens; RIP-Seq
Sample: SRS19714990
BioProject: PRJNA1048316
BioSample: SAMN38611429
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: V5_50_to_125
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034020 56529415 5709470915 1800.76 50_to_125_IN1.fastq.gz, SRR27034020, SRR27034020.lite SRA
SRX22725944 SRP475592 RIP-Seq SINGLE
GSM7932166: V5_50_to_125 replicate 2 size-matched input; Homo sapiens; RIP-Seq
Sample: SRS19714992
BioProject: PRJNA1048316
BioSample: SAMN38611428
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: V5_50_to_125
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR27034078 57003198 5757322998 1805.87 50_to_125_IN2.fastq.gz, SRR27034078, SRR27034078.lite SRA
SRX24779977 SRP475592 RIP-Seq SINGLE
GSM8302061: ZNF473 endogenous eCLIP replicate 1 IP; Homo sapiens; RIP-Seq
Sample: SRS21498067
BioProject: PRJNA1048316
BioSample: SAMN41652138
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF473 endogenous
treatment: Thermo Fisher BS-12242R
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR29262328 32124129 4850743479 1660.22 ZNF473_N_IP1_S53_L006_R1_001.fastq.gz, SRR29262328, SRR29262328.lite SRA
SRX24779978 SRP475592 RIP-Seq SINGLE
GSM8302062: ZNF473 endogenous eCLIP replicate 2 IP; Homo sapiens; RIP-Seq
Sample: SRS21498068
BioProject: PRJNA1048316
BioSample: SAMN41652137
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF473 endogenous
treatment: Thermo Fisher BS-12242R
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR29262327 27544213 4159176163 1421.73 ZNF473_N_IP2_S55_L006_R1_001.fastq.gz, SRR29262327, SRR29262327.lite SRA
SRX24779979 SRP475592 RIP-Seq SINGLE
GSM8302063: ZNF473 endogenous eCLIP replicate 1 size-matched input; Homo sapiens; RIP-Seq
Sample: SRS21498069
BioProject: PRJNA1048316
BioSample: SAMN41652136
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF473 endogenous
treatment: none
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR29262326 24371393 3680080343 1270.0 ZNF473_N_IN1_S52_L006_R1_001.fastq.gz, SRR29262326, SRR29262326.lite SRA
SRX24779980 SRP475592 RIP-Seq SINGLE
GSM8302064: ZNF473 endogenous eCLIP replicate 2 size-matched input; Homo sapiens; RIP-Seq
Sample: SRS21498070
BioProject: PRJNA1048316
BioSample: SAMN41652135
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF473 endogenous
treatment: none
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR29262325 22084651 3334782301 1153.12 ZNF473_N_IN2_S54_L006_R1_001.fastq.gz, SRR29262325, SRR29262325.lite SRA
SRX24779981 SRP475592 RIP-Seq SINGLE
GSM8302065: ZNF277 endogenous eCLIP replicate 1 IP; Homo sapiens; RIP-Seq
Sample: SRS21498071
BioProject: PRJNA1048316
BioSample: SAMN41652134
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF277 endogenous
treatment: Invitrogen PA5-55577
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR29262324 35288253 5328526203 1923.44 ZNF277_N_IP1_S49_L006_R1_001.fastq.gz, SRR29262324, SRR29262324.lite SRA
SRX24779982 SRP475592 RIP-Seq SINGLE
GSM8302066: ZNF277 endogenous eCLIP replicate 2 IP; Homo sapiens; RIP-Seq
Sample: SRS21498072
BioProject: PRJNA1048316
BioSample: SAMN41652133
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF277 endogenous
treatment: Invitrogen PA5-55577
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR29262323 25893645 3909940395 1363.7 ZNF277_N_IP2_S51_L006_R1_001.fastq.gz, SRR29262323, SRR29262323.lite SRA
SRX24779983 SRP475592 RIP-Seq SINGLE
GSM8302067: ZNF277 endogenous eCLIP replicate 1 size-matched input; Homo sapiens; RIP-Seq
Sample: SRS21498073
BioProject: PRJNA1048316
BioSample: SAMN41652132
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF277 endogenous
treatment: none
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR29262322 22613906 3414699806 1198.99 ZNF277_N_IN1_S48_L006_R1_001.fastq.gz, SRR29262322, SRR29262322.lite SRA
SRX24779984 SRP475592 RIP-Seq SINGLE
GSM8302068: ZNF277 endogenous eCLIP replicate 2 size-matched input; Homo sapiens; RIP-Seq
Sample: SRS21498074
BioProject: PRJNA1048316
BioSample: SAMN41652131
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF277 endogenous
treatment: none
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR29262321 20018615 3022810865 1082.14 ZNF277_N_IN2_S50_L006_R1_001.fastq.gz, SRR29262321, SRR29262321.lite SRA
SRX24779985 SRP475592 RIP-Seq SINGLE
GSM8302069: ZNF277 RBD-deleted replicate 1 eCLIP IP; Homo sapiens; RIP-Seq
Sample: SRS21498075
BioProject: PRJNA1048316
BioSample: SAMN41652130
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF277 RBD-deleted
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR29262320 13536985 690386235 220.33 ZNF277_IP1_S1_L001_R1_001.fastq.gz, SRR29262320, SRR29262320.lite SRA
SRX24779986 SRP475592 RIP-Seq SINGLE
GSM8302070: ZNF277 RBD-deleted replicate 2 eCLIP IP; Homo sapiens; RIP-Seq
Sample: SRS21498076
BioProject: PRJNA1048316
BioSample: SAMN41652129
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF277 RBD-deleted
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR29262319 9327587 475706937 153.25 ZNF277_IP2_S2_L001_R1_001.fastq.gz, SRR29262319, SRR29262319.lite SRA
SRX24779987 SRP475592 RIP-Seq SINGLE
GSM8302071: ZNF593 RBD-deleted replicate 1 eCLIP IP; Homo sapiens; RIP-Seq
Sample: SRS21498077
BioProject: PRJNA1048316
BioSample: SAMN41652128
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF593 RBD-deleted
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR29262318 11977928 610874328 195.88 ZNF593_IP1_S5_L001_R1_001.fastq.gz, SRR29262318, SRR29262318.lite SRA
SRX24779988 SRP475592 RIP-Seq SINGLE
GSM8302072: ZNF593 RBD-deleted replicate 2 eCLIP IP; Homo sapiens; RIP-Seq
Sample: SRS21498078
BioProject: PRJNA1048316
BioSample: SAMN41652127
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: ZNF593 RBD-deleted
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR29262317 17487149 891844599 283.85 ZNF593_IP2_S6_L001_R1_001.fastq.gz, SRR29262317, SRR29262317.lite SRA
SRX24779989 SRP475592 RIP-Seq SINGLE
GSM8302073: CNBP RBD-deleted replicate 1 eCLIP IP; Homo sapiens; RIP-Seq
Sample: SRS21498079
BioProject: PRJNA1048316
BioSample: SAMN41652126
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: CNBP RBD-deleted
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR29262316 18538849 945481299 299.51 CNBP_IP1_S7_L001_R1_001.fastq.gz, SRR29262316, SRR29262316.lite SRA
SRX24779990 SRP475592 RIP-Seq SINGLE
GSM8302074: CNBP RBD-deleted replicate 2 eCLIP IP; Homo sapiens; RIP-Seq
Sample: SRS21498080
BioProject: PRJNA1048316
BioSample: SAMN41652125
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: CNBP RBD-deleted
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR29262315 18488279 942902229 299.81 CNBP_IP2_S8_L001_R1_001.fastq.gz, SRR29262315, SRR29262315.lite SRA
SRX24779991 SRP475592 RIP-Seq SINGLE
GSM8302075: CISD2 RBD-deleted replicate 1 eCLIP IP; Homo sapiens; RIP-Seq
Sample: SRS21498081
BioProject: PRJNA1048316
BioSample: SAMN41652124
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: CISD2 RBD-deleted
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR29262314 13153546 670830846 214.18 CISD2_IP1_S3_L001_R1_001.fastq.gz, SRR29262314, SRR29262314.lite SRA
SRX24779992 SRP475592 RIP-Seq SINGLE
GSM8302076: CISD2 RBD-deleted replicate 2 eCLIP IP; Homo sapiens; RIP-Seq
Sample: SRS21498082
BioProject: PRJNA1048316
BioSample: SAMN41652123
Platform: ILLUMINA
Instrument: Illumina NovaSeq 6000
Organism: Homo sapiens
Sample attributes
source_name: HEK293T
cell line: HEK293T
cell type: Human embryonic kidney
genotype: CISD2 RBD-deleted
treatment: Bethyl A190-120A
geo_loc_name: missing
collection_date: missing
Original files (1)
HEK293T
Runs (1)
Run Spots Bases Size (MB) Files Link
SRR29262313 14860768 757899168 241.26 CISD2_IP2_S4_L001_R1_001.fastq.gz, SRR29262313, SRR29262313.lite SRA

Linked Publications (1)

Integrated multi-omics analysis of zinc-finger proteins uncovers roles in RNA regulation.
Molecular cell · 2024

Data Files (134)

Accession File Name Stored Type Output Type Mapping Assembly Size Download
— 100_to_225_IN1.fastq.gz RIP-Seq 2.1 GB link
— 100_to_225_IN2.fastq.gz RIP-Seq 1.8 GB link
— 125_to_225_IN1.fastq.gz RIP-Seq 1.5 GB link
— 125_to_225_IN2.fastq.gz RIP-Seq 1.3 GB link
— 150_to_225_IN1.fastq.gz RIP-Seq 707.2 MB link
— 150_to_225_IN2.fastq.gz RIP-Seq 707.1 MB link
— 25_to_100_IN1.fastq.gz RIP-Seq 1.9 GB link
— 25_to_100_IN2.fastq.gz RIP-Seq 2.0 GB link
— 50_to_125_IN1.fastq.gz RIP-Seq 1.8 GB link
— 50_to_125_IN2.fastq.gz RIP-Seq 1.8 GB link
— 75_to_150_IN1.fastq.gz RIP-Seq 2.1 GB link
— 75_to_150_IN2.fastq.gz RIP-Seq 1.7 GB link
— APEX2_IP1_S5_L001_R1_001.fastq.gz RIP-Seq 408.0 MB link
— APEX2_IP2_S6_L001_R1_001.fastq.gz RIP-Seq 442.8 MB link
— BRCA1IP1_S38_L002_R1_001.fastq.gz RIP-Seq 879.0 MB link
— BRCA1IP2_S39_L002_R1_001.fastq.gz RIP-Seq 912.5 MB link
— CISD1_IP1_S36_L002_R1_001.fastq.gz RIP-Seq 622.6 MB link
— CISD1_IP2_S37_L002_R1_001.fastq.gz RIP-Seq 628.9 MB link
— CISD2_IP1_S36_L002_R1_001.fastq.gz RIP-Seq 588.6 MB link
— CISD2_IP1_S3_L001_R1_001.fastq.gz RIP-Seq 214.2 MB link
— CISD2_IP2_S37_L002_R1_001.fastq.gz RIP-Seq 524.0 MB link
— CISD2_IP2_S4_L001_R1_001.fastq.gz RIP-Seq 241.3 MB link
— CNBP_IP1_S34_L002_R1_001.fastq.gz RIP-Seq 674.9 MB link
— CNBP_IP1_S7_L001_R1_001.fastq.gz RIP-Seq 299.5 MB link
— CNBP_IP2_S35_L002_R1_001.fastq.gz RIP-Seq 481.8 MB link
— CNBP_IP2_S8_L001_R1_001.fastq.gz RIP-Seq 299.8 MB link
— CNOT4IP1_S40_L002_R1_001.fastq.gz RIP-Seq 615.3 MB link
— CNOT4IP2_S41_L002_R1_001.fastq.gz RIP-Seq 2.2 GB link
— CPS4L_IP1_S37_L002_R1_001.fastq.gz RIP-Seq 1.4 GB link
— CPS4L_IP2_S38_L002_R1_001.fastq.gz RIP-Seq 1.6 GB link
— CPSF4_IP1_S26_L002_R1_001.fastq.gz RIP-Seq 612.3 MB link
— CPSF4_IP2_S27_L002_R1_001.fastq.gz RIP-Seq 361.4 MB link
— CTCF_IP1_S13_L004_R1_001.fastq.gz RIP-Seq 1.4 GB link
— CTCF_IP2_S14_L004_R1_001.fastq.gz RIP-Seq 668.1 MB link
— ERI2_IP1_S3_L001_R1_001.fastq.gz RIP-Seq 351.0 MB link
— ERI2_IP2_S4_L001_R1_001.fastq.gz RIP-Seq 430.5 MB link
— FUS_IP1_S31_L002_R1_001.fastq.gz RIP-Seq 1.5 GB link
— FUS_IP2_S32_L002_R1_001.fastq.gz RIP-Seq 1.6 GB link
— G2E3IP1_S34_L002_R1_001.fastq.gz RIP-Seq 840.5 MB link
— G2E3IP2_S35_L002_R1_001.fastq.gz RIP-Seq 492.1 MB link
— GIN1_IP1_S15_L001_R1_001.fastq.gz RIP-Seq 772.0 MB link
— GIN1_IP2_S16_L001_R1_001.fastq.gz RIP-Seq 879.6 MB link
— IGHMBP2_IP1_S21_L004_R1_001.fastq.gz RIP-Seq 1.3 GB link
— IGHMBP2_IP2_S22_L004_R1_001.fastq.gz RIP-Seq 1.6 GB link
— LN28B_IP1_S28_L002_R1_001.fastq.gz RIP-Seq 600.6 MB link
— LN28B_IP2_S29_L002_R1_001.fastq.gz RIP-Seq 518.2 MB link
— MAZ_IP1_S39_L002_R1_001.fastq.gz RIP-Seq 1.3 GB link
— MAZ_IP2_S40_L002_R1_001.fastq.gz RIP-Seq 1.5 GB link
— MBNL1_IP1_S19_L004_R1_001.fastq.gz RIP-Seq 1.2 GB link
— MBNL1_IP2_S20_L004_R1_001.fastq.gz RIP-Seq 1.6 GB link
— NANO2_IP1_S9_L001_R1_001.fastq.gz RIP-Seq 258.1 MB link
— NANO2_IP2_S10_L001_R1_001.fastq.gz RIP-Seq 259.6 MB link
— PHF7_IP1_S39_L004_R1_001.fastq.gz RIP-Seq 1022.8 MB link
— PHF7_IP2_S40_L004_R1_001.fastq.gz RIP-Seq 920.9 MB link
— R113A_IP1_S40_L002_R1_001.fastq.gz RIP-Seq 687.9 MB link
— R113A_IP2_S41_L002_R1_001.fastq.gz RIP-Seq 598.1 MB link
— RBM5_IP1_S35_L002_R1_001.fastq.gz RIP-Seq 1.6 GB link
— RBM5_IP2_S36_L002_R1_001.fastq.gz RIP-Seq 1.5 GB link
— RNF14_IIP1_S11_L001_R1_001.fastq.gz RIP-Seq 823.8 MB link
— RNF14_IP2_S12_L001_R1_001.fastq.gz RIP-Seq 761.7 MB link
— SALL4_IP1_S30_L002_R1_001.fastq.gz RIP-Seq 831.8 MB link
— SALL4_IP2_S31_L002_R1_001.fastq.gz RIP-Seq 574.9 MB link
— SNRPC_IP1_S44_L002_R1_001.fastq.gz RIP-Seq 687.1 MB link
— SNRPC_IP2_S45_L002_R1_001.fastq.gz RIP-Seq 774.7 MB link
— TEX13A_IP1_S35_L004_R1_001.fastq.gz RIP-Seq 887.5 MB link
— TEX13A_IP2_S36_L004_R1_001.fastq.gz RIP-Seq 944.0 MB link
— TF3C4_IP1_S17_L004_R1_001.fastq.gz RIP-Seq 1.1 GB link
— TF3C4_IP2_S18_L004_R1_001.fastq.gz RIP-Seq 1.0 GB link
— TRIM55IP1_S42_L002_R1_001.fastq.gz RIP-Seq 611.2 MB link
— TRIM55IP2_S43_L002_R1_001.fastq.gz RIP-Seq 756.0 MB link
— U2AF1_IP1_S34_L004_R1_001.fastq.gz RIP-Seq 390.2 MB link
— U2AF1_IP2_S36_L004_R1_001.fastq.gz RIP-Seq 421.3 MB link
— V5_100_to_225_IP1.fastq.gz RIP-Seq 1.8 GB link
— V5_100_to_225_IP2.fastq.gz RIP-Seq 1.9 GB link
— V5_125_to_225_IP1.fastq.gz RIP-Seq 1.2 GB link
— V5_125_to_225_IP2.fastq.gz RIP-Seq 1.4 GB link
— V5_150_to_225_IP1.fastq.gz RIP-Seq 623.0 MB link
— V5_150_to_225_IP2.fastq.gz RIP-Seq 631.9 MB link
— V5_25_to_100_IP1.fastq.gz RIP-Seq 1.8 GB link
— V5_25_to_100_IP2.fastq.gz RIP-Seq 2.1 GB link
— V5_50_to_125_IP1.fastq.gz RIP-Seq 1.7 GB link
— V5_50_to_125_IP2.fastq.gz RIP-Seq 1.9 GB link
— V5_75_to_150_IP1.fastq.gz RIP-Seq 1.7 GB link
— V5_75_to_150_IP2.fastq.gz RIP-Seq 1.9 GB link
— WBP4_IP1_S7_L001_R1_001.fastq.gz RIP-Seq 379.9 MB link
— WBP4_IP2_S8_L001_R1_001.fastq.gz RIP-Seq 353.4 MB link
— ZC3H3_IP1_S1_L001_R1_001.fastq.gz RIP-Seq 397.8 MB link
— ZC3H3_IP2_S2_L001_R1_001.fastq.gz RIP-Seq 532.5 MB link
— ZC3HAV1_IP1_S23_L004_R1_001.fastq.gz RIP-Seq 977.3 MB link
— ZC3HAV1_IP2_S24_L004_R1_001.fastq.gz RIP-Seq 458.3 MB link
— ZFP36L1-IP1_S28_R1_001.fastq.gz RIP-Seq 1.1 GB link
— ZFP36L1-IP2_S29_R1_001.fastq.gz RIP-Seq 1.8 GB link
— ZMAT3_IP1_S11_L001_R1_001.fastq.gz RIP-Seq 530.2 MB link
— ZMAT3_IP2_S12_L001_R1_001.fastq.gz RIP-Seq 404.2 MB link
— ZMAT5_IP1_S25_L004_R1_001.fastq.gz RIP-Seq 1001.5 MB link
— ZMAT5_IP2_S26_L004_R1_001.fastq.gz RIP-Seq 694.7 MB link
— ZNF22_IP1_S48_L002_R1_001.fastq.gz RIP-Seq 618.2 MB link
— ZNF22_IP2_S49_L002_R1_001.fastq.gz RIP-Seq 804.7 MB link
— ZNF277_IP1_S1_L001_R1_001.fastq.gz RIP-Seq 220.3 MB link
— ZNF277_IP1_S27_L004_R1_001.fastq.gz RIP-Seq 669.4 MB link
— ZNF277_IP2_S28_L004_R1_001.fastq.gz RIP-Seq 992.7 MB link
— ZNF277_IP2_S2_L001_R1_001.fastq.gz RIP-Seq 153.2 MB link
— ZNF277_N_IN1_S48_L006_R1_001.fastq.gz RIP-Seq 1.2 GB link
— ZNF277_N_IN2_S50_L006_R1_001.fastq.gz RIP-Seq 1.1 GB link
— ZNF277_N_IP1_S49_L006_R1_001.fastq.gz RIP-Seq 1.9 GB link
— ZNF277_N_IP2_S51_L006_R1_001.fastq.gz RIP-Seq 1.3 GB link
— ZNF2_IP1_S33_L002_R1_001.fastq.gz RIP-Seq 633.5 MB link
— ZNF2_IP2_S34_L002_R1_001.fastq.gz RIP-Seq 1.7 GB link
— ZNF317_IP1_S29_L004_R1_001.fastq.gz RIP-Seq 1002.3 MB link
— ZNF317_IP2_S30_L004_R1_001.fastq.gz RIP-Seq 878.0 MB link
— ZNF473-DEL-IN1_S25_R1_001.fastq.gz RIP-Seq 600.5 MB link
— ZNF473-DEL-IN2_S27_R1_001.fastq.gz RIP-Seq 272.1 MB link
— ZNF473-DEL-IP1_S26_R1_001.fastq.gz RIP-Seq 625.3 MB link
— ZNF473-DEL-IP2_S28_R1_001.fastq.gz RIP-Seq 773.5 MB link
— ZNF473IP1_S36_L002_R1_001.fastq.gz RIP-Seq 706.0 MB link
— ZNF473IP2_S37_L002_R1_001.fastq.gz RIP-Seq 771.2 MB link
— ZNF473_N_IN1_S52_L006_R1_001.fastq.gz RIP-Seq 1.2 GB link
— ZNF473_N_IN2_S54_L006_R1_001.fastq.gz RIP-Seq 1.1 GB link
— ZNF473_N_IP1_S53_L006_R1_001.fastq.gz RIP-Seq 1.6 GB link
— ZNF473_N_IP2_S55_L006_R1_001.fastq.gz RIP-Seq 1.4 GB link
— ZNF473-WT-IN1_S21_R1_001.fastq.gz RIP-Seq 588.4 MB link
— ZNF473-WT-IN2_S23_R1_001.fastq.gz RIP-Seq 808.5 MB link
— ZNF473-WT-IP1_S22_R1_001.fastq.gz RIP-Seq 559.0 MB link
— ZNF473-WT-IP2_S24_R1_001.fastq.gz RIP-Seq 633.8 MB link
— ZNF574_IP1_S3_L001_R1_001.fastq.gz RIP-Seq 792.5 MB link
— ZNF574_IP2_S4_L001_R1_001.fastq.gz RIP-Seq 784.5 MB link
— ZNF593_IP1_S52_L002_R1_001.fastq.gz RIP-Seq 836.3 MB link
— ZNF593_IP1_S5_L001_R1_001.fastq.gz RIP-Seq 195.9 MB link
— ZNF593_IP2_S53_L002_R1_001.fastq.gz RIP-Seq 1015.7 MB link
— ZNF593_IP2_S6_L001_R1_001.fastq.gz RIP-Seq 283.8 MB link
— ZNF706_IP1_S31_L004_R1_001.fastq.gz RIP-Seq 871.1 MB link
— ZNF706_IP2_S32_L004_R1_001.fastq.gz RIP-Seq 561.5 MB link
— ZNF800_IP1_S15_L004_R1_001.fastq.gz RIP-Seq 667.8 MB link
— ZNF800_IP2_S16_L004_R1_001.fastq.gz RIP-Seq 897.5 MB link