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Integrated multi-omics analysis of zinc-finger proteins uncovers roles in RNA regulation.

Maya L Gosztyla, Lijun Zhan, Sara Olson, Xintao Wei, Jack Naritomi, Grady Nguyen, Lena Street, Grant A Goda, Francisco F Cavazos, Jonathan C Schmok, Manya Jain, Easin Uddin Syed, Eunjeong Kwon, Wenhao Jin, Eric Kofman, Alexandra T Tankka, Allison Li, Valerie Gonzalez, Eric Lécuyer, Daniel Dominguez, Marko Jovanovic, Brenton R Graveley, Gene W Yeo

Molecular cell · 2024 · Vol. 84 (19) · pp. 3826-3842.e8

Abstract

RNA interactome studies have revealed that hundreds of zinc-finger proteins (ZFPs) are candidate RNA-binding proteins (RBPs), yet their RNA substrates and functional significance remain largely uncharacterized. Here, we present a systematic multi-omics analysis of the DNA- and RNA-binding targets and regulatory roles of more than 100 ZFPs representing 37 zinc-finger families. We show that multiple ZFPs are previously unknown regulators of RNA splicing, alternative polyadenylation, stability, or translation. The examined ZFPs show widespread sequence-specific RNA binding and preferentially bind proximal to transcription start sites. Additionally, several ZFPs associate with their targets at both the DNA and RNA levels. We highlight ZNF277, a C2H2 ZFP that binds thousands of RNA targets and acts as a multi-functional RBP. We also show that ZNF473 is a DNA/RNA-associated protein that regulates the expression and splicing of cell cycle genes. Our results reveal diverse roles for ZFPs in transcriptional and post-transcriptional gene regulation.

Linked datasets 7

GSE249245 GSE · via ncbi_elink
GEO ↗

Integrated multi-omics analysis of zinc finger proteins uncovers roles in RNA regulation [Cut&Run]

Homo sapiens

180 data files
FileTypeSize
APEX2_1_S101_L002_R1_001.fastq.gz OTHER 208.9 MB
APEX2_2_S102_L002_R1_001.fastq.gz OTHER 152.6 MB
BRCA1_1_S109_L002_R1_001.fastq.gz OTHER 206.4 MB
BRCA1_2_S110_L002_R1_001.fastq.gz OTHER 1.2 GB
CISD1_1_S15_L001_R1_001.fastq.gz OTHER 252.8 MB
CISD1_2_S16_L001_R1_001.fastq.gz OTHER 273.8 MB
CISD2_1_S119_L002_R1_001.fastq.gz OTHER 121.5 MB
CISD2_2_S120_L002_R1_001.fastq.gz OTHER 131.3 MB
CNBP_1_S13_L001_R1_001.fastq.gz OTHER 539.8 MB
CNBP_2_S14_L001_R1_001.fastq.gz OTHER 444.7 MB
CNOT4_1_S115_L002_R1_001.fastq.gz OTHER 98.3 MB
CNOT4_2_S116_L002_R1_001.fastq.gz OTHER 115.2 MB
CPSF4_1_S93_L002_R1_001.fastq.gz OTHER 211.5 MB
CPSF4_2_S94_L002_R1_001.fastq.gz OTHER 162.9 MB
CPSF4L_1_S56_R1_001.fastq.gz OTHER 530.3 MB
CPSF4L_2_S57_R1_001.fastq.gz OTHER 408.8 MB
CTCF_1_S28_L001_R1_001.fastq.gz OTHER 1.1 GB
CTCF_2_S29_L001_R1_001.fastq.gz OTHER 783.9 MB
ERI2_1_S99_L002_R1_001.fastq.gz OTHER 129.9 MB
ERI2_2_S100_L002_R1_001.fastq.gz OTHER 217.1 MB
FUS_1_S107_L002_R1_001.fastq.gz OTHER 1.8 GB
FUS_2_S108_L002_R1_001.fastq.gz OTHER 156.5 MB
G2E3_1_S79_L002_R1_001.fastq.gz OTHER 120.1 MB
G2E3_2_S80_L002_R1_001.fastq.gz OTHER 205.5 MB
GIN1_1_S81_L002_R1_001.fastq.gz OTHER 316.1 MB
GIN1_2_S82_L002_R1_001.fastq.gz OTHER 290.9 MB
GTF3C4-1_S49_R1_001.fastq.gz OTHER 2.9 GB
GTF3C4-2_S50_R1_001.fastq.gz OTHER 2.5 GB
IGHMBP2_1_S125_L002_R1_001.fastq.gz OTHER 333.3 MB
IGHMBP2_2_S126_L002_R1_001.fastq.gz OTHER 181.2 MB
LIN28B_1_S7_L001_R1_001.fastq.gz OTHER 1.1 GB
LIN28B_2_S8_L001_R1_001.fastq.gz OTHER 1.6 GB
MAZ_1_R1_001.fastq.gz OTHER 535.0 MB
MAZ_2_R1_001.fastq.gz OTHER 1.4 GB
MBNL1_1_S89_L002_R1_001.fastq.gz OTHER 2.0 MB
MBNL1_2_S90_L002_R1_001.fastq.gz OTHER 155.3 MB
NANOS2_1_S111_L002_R1_001.fastq.gz OTHER 129.7 MB
NANOS2_2_S112_L002_R1_001.fastq.gz OTHER 182.9 MB
PHF7_1_S91_L002_R1_001.fastq.gz OTHER 238.4 MB
PHF7_2_S92_L002_R1_001.fastq.gz OTHER 202.0 MB
RBM5_1_S54_R1_001.fastq.gz OTHER 516.6 MB
RBM5_2_S55_R1_001.fastq.gz OTHER 865.6 MB
RNF113A_1_S58_R1_001.fastq.gz OTHER 950.6 MB
RNF113A_2_S69_R1_001.fastq.gz OTHER 1.1 GB
RNF14-1_S45_R1_001.fastq.gz OTHER 1.7 GB
RNF14-2_S46_R1_001.fastq.gz OTHER 1.4 GB
SALL4_1_S9_L001_R1_001.fastq.gz OTHER 1.7 GB
SALL4_2_S10_L001_R1_001.fastq.gz OTHER 168.8 MB
SNRPC_1_S85_L002_R1_001.fastq.gz OTHER 155.1 MB
SNRPC_2_S86_L002_R1_001.fastq.gz OTHER 202.5 MB
SRR27033839_GSM7932035 OTHER 158.0 MB
SRR27033840_GSM7932034 OTHER 94.0 MB
SRR27033841_GSM7932033 OTHER 172.0 MB
SRR27033842_GSM7932032 OTHER 152.0 MB
SRR27033843_GSM7932031 OTHER 162.0 MB
SRR27033844_GSM7932030 OTHER 257.0 MB
SRR27033845_GSM7932029 OTHER 190.0 MB
SRR27033846_GSM7932028 OTHER
SRR27033847_GSM7932027 OTHER 124.0 MB
SRR27033848_GSM7932026 OTHER 144.0 MB
SRR27033849_GSM7932025 OTHER 174.0 MB
SRR27033850_GSM7932024 OTHER 381.0 MB
SRR27033851_GSM7932023 OTHER 310.0 MB
SRR27033852_GSM7932022 OTHER 1.0 MB
SRR27033853_GSM7932021 OTHER 231.0 MB
SRR27033854_GSM7932020 OTHER 204.0 MB
SRR27033855_GSM7932019 OTHER 192.0 MB
SRR27033856_GSM7932018 OTHER 1.1 GB
SRR27033857_GSM7932017 OTHER 1.0 GB
SRR27033858_GSM7932016 OTHER 229.0 MB
SRR27033859_GSM7932015 OTHER 229.0 MB
SRR27033860_GSM7932014 OTHER
SRR27033861_GSM7932013 OTHER 119.0 MB
SRR27033862_GSM7932012 OTHER 176.0 MB
SRR27033863_GSM7932050 OTHER 1.3 GB
SRR27033864_GSM7932049 OTHER 1.4 GB
SRR27033865_GSM7932048 OTHER 1.2 GB
SRR27033866_GSM7932047 OTHER 996.0 MB
SRR27033867_GSM7932046 OTHER 952.0 MB
SRR27033868_GSM7932045 OTHER 931.0 MB
SRR27033869_GSM7932044 OTHER 2.2 GB
SRR27033870_GSM7932043 OTHER 3.1 GB
SRR27033871_GSM7932042 OTHER 216.0 MB
SRR27033872_GSM7932041 OTHER 155.0 MB
SRR27033873_GSM7932040 OTHER 1.6 GB
SRR27033874_GSM7932039 OTHER 1.8 GB
SRR27033875_GSM7932038 OTHER 1.5 GB
SRR27033876_GSM7932037 OTHER 1.7 GB
SRR27033877_GSM7932036 OTHER 143.0 MB
SRR27033878_GSM7932011 OTHER 150.0 MB
SRR27033879_GSM7932010 OTHER 202.0 MB
SRR27033880_GSM7932009 OTHER 155.0 MB
SRR27033881_GSM7932008 OTHER 168.0 MB
SRR27033882_GSM7932007 OTHER 1.7 GB
SRR27033883_GSM7932006 OTHER 1.4 GB
SRR27033884_GSM7932005 OTHER 1.7 GB
SRR27033885_GSM7932004 OTHER 1.1 GB
SRR27033886_GSM7932003 OTHER 950.0 MB
SRR27033887_GSM7932002 OTHER 865.0 MB
SRR27033888_GSM7932001 OTHER 516.0 MB
SRR27033889_GSM7932000 OTHER 201.0 MB
SRR27033890_GSM7931999 OTHER 238.0 MB
SRR27033891_GSM7931998 OTHER 182.0 MB
SRR27033892_GSM7931997 OTHER 129.0 MB
SRR27033893_GSM7931996 OTHER 155.0 MB
SRR27033894_GSM7931995 OTHER 1.0 MB
SRR27033895_GSM7931994 OTHER 1.4 GB
SRR27033896_GSM7931993 OTHER 534.0 MB
SRR27033897_GSM7931992 OTHER 1.6 GB
SRR27033898_GSM7931991 OTHER 1.1 GB
SRR27033899_GSM7931990 OTHER 181.0 MB
SRR27033900_GSM7931989 OTHER 333.0 MB
SRR27033901_GSM7931988 OTHER 2.5 GB
SRR27033902_GSM7931987 OTHER 2.9 GB
SRR27033903_GSM7931986 OTHER 290.0 MB
SRR27033904_GSM7931985 OTHER 316.0 MB
SRR27033905_GSM7931984 OTHER 205.0 MB
SRR27033906_GSM7931983 OTHER 120.0 MB
SRR27033907_GSM7931982 OTHER 156.0 MB
SRR27033908_GSM7931981 OTHER 1.8 GB
SRR27033909_GSM7931980 OTHER 217.0 MB
SRR27033910_GSM7931979 OTHER 129.0 MB
SRR27033911_GSM7931978 OTHER 783.0 MB
SRR27033912_GSM7931977 OTHER 1.1 GB
SRR27033913_GSM7931976 OTHER 162.0 MB
SRR27033914_GSM7931975 OTHER 211.0 MB
SRR27033915_GSM7931974 OTHER 408.0 MB
SRR27033916_GSM7931973 OTHER 530.0 MB
SRR27033917_GSM7931972 OTHER 115.0 MB
SRR27033918_GSM7931971 OTHER 98.0 MB
SRR27033919_GSM7931970 OTHER 444.0 MB
SRR27033920_GSM7931969 OTHER 539.0 MB
SRR27033921_GSM7931968 OTHER 131.0 MB
SRR27033922_GSM7931967 OTHER 121.0 MB
SRR27033923_GSM7931966 OTHER 273.0 MB
SRR27033924_GSM7931965 OTHER 252.0 MB
SRR27033925_GSM7931964 OTHER 1.2 GB
SRR27033926_GSM7931963 OTHER 206.0 MB
SRR27033927_GSM7931962 OTHER 152.0 MB
SRR27033928_GSM7931961 OTHER 208.0 MB
TEX13A_1_S117_L002_R1_001.fastq.gz OTHER 150.4 MB
TEX13A_2_S118_L002_R1_001.fastq.gz OTHER 176.6 MB
TRIM55_1_S127_L002_R1_001.fastq.gz OTHER 119.0 MB
TRIM55_2_S128_L002_R1_001.fastq.gz OTHER 983.0 KB
U2AF1_1_S95_L002_R1_001.fastq.gz OTHER 229.8 MB
U2AF1_2_S96_L002_R1_001.fastq.gz OTHER 229.7 MB
UT-2_S57_R1_001.fastq.gz OTHER 1.1 GB
UT_S25_L001_R1_001.fastq.gz OTHER 1.0 GB
WBP4_1_S103_L002_R1_001.fastq.gz OTHER 192.3 MB
WBP4_2_S104_L002_R1_001.fastq.gz OTHER 204.9 MB
ZC3H3_1_S97_L002_R1_001.fastq.gz OTHER 231.9 MB
ZC3H3_2_S98_L002_R1_001.fastq.gz OTHER 1.1 MB
ZFP36L1_1_S11_L001_R1_001.fastq.gz OTHER 310.1 MB
ZFP36L1_2_S12_L001_R1_001.fastq.gz OTHER 381.5 MB
ZMAT3_1_S105_L002_R1_001.fastq.gz OTHER 174.7 MB
ZMAT3_2_S106_L002_R1_001.fastq.gz OTHER 144.8 MB
ZMAT5_1_S123_L002_R1_001.fastq.gz OTHER 124.2 MB
ZMAT5_2_S124_L002_R1_001.fastq.gz OTHER 389.1 KB
ZNF2_1_S113_L002_R1_001.fastq.gz OTHER 172.0 MB
ZNF22_1_S87_L002_R1_001.fastq.gz OTHER 190.2 MB
ZNF22_2_S88_L002_R1_001.fastq.gz OTHER 257.8 MB
ZNF2_2_S114_L002_R1_001.fastq.gz OTHER 94.3 MB
ZNF277_1_S19_L001_R1_001.fastq.gz OTHER 162.3 MB
ZNF277_2_S20_L001_R1_001.fastq.gz OTHER 152.5 MB
ZNF317_1_S17_L001_R1_001.fastq.gz OTHER 158.5 MB
ZNF317_2_S18_L001_R1_001.fastq.gz OTHER 143.4 MB
ZNF473_1_S83_L002_R1_001.fastq.gz OTHER 155.2 MB
ZNF473_2_S84_L002_R1_001.fastq.gz OTHER 216.1 MB
ZNF473-DEL-1_S60_R1_001.fastq.gz OTHER 1.7 GB
ZNF473-DEL-2_S61_R1_001.fastq.gz OTHER 1.5 GB
ZNF473-WT-1_S58_R1_001.fastq.gz OTHER 1.8 GB
ZNF473-WT-2_S59_R1_001.fastq.gz OTHER 1.6 GB
ZNF574-1_S47_R1_001.fastq.gz OTHER 3.1 GB
ZNF574-2_S48_R1_001.fastq.gz OTHER 2.2 GB
ZNF593_1_R1_001.fastq.gz OTHER 931.5 MB
ZNF593_2_R1_001.fastq.gz OTHER 952.8 MB
ZNF706-1_S41_R1_001.fastq.gz OTHER 996.1 MB
ZNF706-2_S42_R1_001.fastq.gz OTHER 1.2 GB
ZNF800-1_S43_R1_001.fastq.gz OTHER 1.4 GB
ZNF800-2_S44_R1_001.fastq.gz OTHER 1.3 GB
GSE249247 GSE · via ncbi_elink
GEO ↗

Integrated multi-omics analysis of zinc finger proteins uncovers roles in RNA regulation.

Homo sapiens

GSE277160 GSE · via ncbi_elink
GEO ↗

Integrated multi-omics analysis of zinc finger proteins uncovers roles in RNA regulation [RNA-seq]

Homo sapiens

484 data files
FileTypeSize
APEX2-BGRSLV03-5_S137_L004_R1_001.filtered.trimmed.paired.f… RNA-Seq 3.2 GB
APEX2-BGRSLV03-6_S138_L004_R1_001.filtered.trimmed.paired.f… RNA-Seq 3.2 GB
ARIH1-BGRSLV07-5_S19_L003_R1_001.filtered.trimmed.paired.fa… RNA-Seq 1.6 GB
ARIH1-BGRSLV07-6_S20_L003_R1_001.filtered.trimmed.paired.fa… RNA-Seq 1.5 GB
BL-BGRSLV04-71_S3_L001_R1_001.filtered.trimmed.paired.fastq… RNA-Seq 2.4 GB
BL-BGRSLV04-72_S4_L001_R1_001.filtered.trimmed.paired.fastq… RNA-Seq 2.7 GB
BMI1-BGRSLV02-27_S105_L003_R1_001.filtered.trimmed.paired.f… RNA-Seq 4.4 GB
BMI1-BGRSLV02-28_S106_L003_R1_001.filtered.trimmed.paired.f… RNA-Seq 2.3 GB
BRCA1-BGRSDLV02-10_S10_L001_R1_001.filtered.trimmed.paired.… RNA-Seq 1.6 GB
BRCA1-BGRSDLV02-9_S9_L001_R1_001.filtered.trimmed.paired.fa… RNA-Seq 1.8 GB
CDCA7-BGRSLV03-10_S140_L004_R1_001.filtered.trimmed.paired.… RNA-Seq 3.0 GB
CDCA7-BGRSLV03-9_S139_L004_R1_001.filtered.trimmed.paired.f… RNA-Seq 2.7 GB
CISD1-BGRSLV03-11_S141_L004_R1_001.filtered.trimmed.paired.… RNA-Seq 3.3 GB
CISD1-BGRSLV03-12_S142_L004_R1_001.filtered.trimmed.paired.… RNA-Seq 3.0 GB
CISD2-BGRSLV03-13_S143_L004_R1_001.filtered.trimmed.paired.… RNA-Seq 3.6 GB
CISD2-BGRSLV03-14_S144_L004_R1_001.filtered.trimmed.paired.… RNA-Seq 2.8 GB
CNBP-BGRSLV03-15_S145_L004_R1_001.filtered.trimmed.paired.f… RNA-Seq 2.9 GB
CNBP-BGRSLV03-16_S146_L004_R1_001.filtered.trimmed.paired.f… RNA-Seq 2.8 GB
CNOT4-BGRSLV02-69_S133_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 2.4 GB
CNOT4-BGRSLV02-70_S134_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 4.8 GB
CPSF4-BGRSLV03-17_S147_L004_R1_001.filtered.trimmed.paired.… RNA-Seq 2.5 GB
CPSF4-BGRSLV03-18_S148_L004_R1_001.filtered.trimmed.paired.… RNA-Seq 2.5 GB
CTCF-BGRSDLV02-21_S21_L001_R1_001.filtered.trimmed.paired.f… RNA-Seq 2.7 GB
CTCF-BGRSDLV02-22_S22_L001_R1_001.filtered.trimmed.paired.f… RNA-Seq 1.7 GB
CXXC1-BGRSLV03-19_S149_L004_R1_001.filtered.trimmed.paired.… RNA-Seq 3.1 GB
CXXC1-BGRSLV03-20_S150_L004_R1_001.filtered.trimmed.paired.… RNA-Seq 3.9 GB
DDX59-BGRSLV02-23_S101_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 2.7 GB
DDX59-BGRSLV02-24_S102_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 2.5 GB
DTX3L-BGRSLV03-21_S151_L004_R1_001.filtered.trimmed.paired.… RNA-Seq 3.2 GB
DTX3L-BGRSLV03-22_S152_L004_R1_001.filtered.trimmed.paired.… RNA-Seq 2.0 GB
DZIP3-BGRSLV02-55_S129_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 3.5 GB
DZIP3-BGRSLV02-56_S130_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 1.8 GB
EGLN1-BGRSLV03-23_S153_L004_R1_001.filtered.trimmed.paired.… RNA-Seq 2.3 GB
EGLN1-BGRSLV03-24_S154_L004_R1_001.filtered.trimmed.paired.… RNA-Seq 2.1 GB
FUS-BGRSLV02-11_S93_L003_R1_001.filtered.trimmed.paired.fas… RNA-Seq 3.3 GB
FUS-BGRSLV02-12_S94_L003_R1_001.filtered.trimmed.paired.fas… RNA-Seq 3.0 GB
G2E3-BGRSDLV02-25_S25_L001_R1_001.filtered.trimmed.paired.f… RNA-Seq 2.6 GB
G2E3-BGRSDLV02-26_S26_L001_R1_001.filtered.trimmed.paired.f… RNA-Seq 1.1 GB
GIN1-BGRSLV03-29_S155_L004_R1_001.filtered.trimmed.paired.f… RNA-Seq 3.2 GB
GIN1-BGRSLV03-30_S156_L004_R1_001.filtered.trimmed.paired.f… RNA-Seq 2.5 GB
GTF3C4-BGRSDLV02-33_S29_L001_R1_001.filtered.trimmed.paired… RNA-Seq 1.6 GB
GTF3C4-BGRSDLV02-34_S30_L001_R1_001.filtered.trimmed.paired… RNA-Seq 1.3 GB
IGHMBP2-BGRSDLV02-37_S33_L001_R1_001.filtered.trimmed.paire… RNA-Seq 2.5 GB
IGHMBP2-BGRSDLV02-38_S34_L001_R1_001.filtered.trimmed.paire… RNA-Seq 1.5 GB
IRF2BP1-BGRSLV04-11_S5_L001_R1_001.filtered.trimmed.paired.… RNA-Seq 2.9 GB
IRF2BP1-BGRSLV04-12_S6_L001_R1_001.filtered.trimmed.paired.… RNA-Seq 2.4 GB
KDM5A-BGRSLV04-13_S7_L001_R1_001.filtered.trimmed.paired.fa… RNA-Seq 3.0 GB
KDM5A-BGRSLV04-14_S8_L001_R1_001.filtered.trimmed.paired.fa… RNA-Seq 2.8 GB
LIN28B-BGRSDLV02-41_S37_L001_R1_001.filtered.trimmed.paired… RNA-Seq 2.8 GB
LIN28B-BGRSDLV02-42_S38_L001_R1_001.filtered.trimmed.paired… RNA-Seq 1.9 GB
LITAF-BGRSLV07-13_S21_L003_R1_001.filtered.trimmed.paired.f… RNA-Seq 2.2 GB
LITAF-BGRSLV07-14_S22_L003_R1_001.filtered.trimmed.paired.f… RNA-Seq 1.7 GB
LYAR-BGRSLV04-17_S9_L001_R1_001.filtered.trimmed.paired.fas… RNA-Seq 2.1 GB
LYAR-BGRSLV04-18_S10_L001_R1_001.filtered.trimmed.paired.fa… RNA-Seq 2.8 GB
MAZ-BGRSDLV02-45_S41_L001_R1_001.filtered.trimmed.paired.fa… RNA-Seq 2.3 GB
MAZ-BGRSDLV02-46_S42_L001_R1_001.filtered.trimmed.paired.fa… RNA-Seq 1.8 GB
MBNL2-BGRSLV06-5_S69_L002_R1_001.filtered.trimmed.paired.fa… RNA-Seq 1.7 GB
MBNL2-BGRSLV06-6_S70_L002_R1_001.filtered.trimmed.paired.fa… RNA-Seq 1.6 GB
MCM10-BGRSLV07-15_S23_L003_R1_001.filtered.trimmed.paired.f… RNA-Seq 2.4 GB
MCM10-BGRSLV07-16_S24_L003_R1_001.filtered.trimmed.paired.f… RNA-Seq 2.2 GB
MNAT1-BGRSLV02-29_S107_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 3.4 GB
MNAT1-BGRSLV02-30_S108_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 3.8 GB
NDUFS6-BGRSLV04-23_S11_L001_R1_001.filtered.trimmed.paired.… RNA-Seq 2.8 GB
NDUFS6-BGRSLV04-24_S12_L001_R1_001.filtered.trimmed.paired.… RNA-Seq 2.7 GB
NR3C1-BGRSLV06-11_S71_L002_R1_001.filtered.trimmed.paired.f… RNA-Seq 1.8 GB
NR3C1-BGRSLV06-12_S72_L002_R1_001.filtered.trimmed.paired.f… RNA-Seq 2.3 GB
NR5A2-BGRSLV02-25_S103_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 3.5 GB
NR5A2-BGRSLV02-26_S104_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 2.3 GB
NR5A2-BGRSLV03-39_S157_L004_R1_001.filtered.trimmed.paired.… RNA-Seq 3.0 GB
NR5A2-BGRSLV03-40_S158_L004_R1_001.filtered.trimmed.paired.… RNA-Seq 3.7 GB
NT-BGRSDLV02-1_S1_L001_R1_001.filtered.trimmed.paired.fastq… RNA-Seq 2.9 GB
NT-BGRSDLV02-2_S2_L001_R1_001.filtered.trimmed.paired.fastq… RNA-Seq 1.7 GB
NT-BGRSLV02-1_S89_L003_R1_001.filtered.trimmed.paired.fastq… RNA-Seq 3.1 GB
NT-BGRSLV02-2_S90_L003_R1_001.filtered.trimmed.paired.fastq… RNA-Seq 1.7 GB
NT-BGRSLV03-1_S135_L004_R1_001.filtered.trimmed.paired.fast… RNA-Seq 2.5 GB
NT-BGRSLV03-2_S136_L004_R1_001.filtered.trimmed.paired.fast… RNA-Seq 2.9 GB
NT-BGRSLV04-1_S1_L001_R1_001.filtered.trimmed.paired.fastq.… RNA-Seq 4.1 GB
NT-BGRSLV04-2_S2_L001_R1_001.filtered.trimmed.paired.fastq.… RNA-Seq 3.4 GB
NT-BGRSLV05-1_S45_L002_R1_001.filtered.trimmed.paired.fastq… RNA-Seq 3.2 GB
NT-BGRSLV05-2_S46_L002_R1_001.filtered.trimmed.paired.fastq… RNA-Seq 2.2 GB
NT-BGRSLV06-1_S67_L002_R1_001.filtered.trimmed.paired.fastq… RNA-Seq 3.0 GB
NT-BGRSLV06-2_S68_L002_R1_001.filtered.trimmed.paired.fastq… RNA-Seq 1.6 GB
NT-BGRSLV07-1_S17_L003_R1_001.filtered.trimmed.paired.fastq… RNA-Seq 1.9 GB
NT-BGRSLV07-2_S18_L003_R1_001.filtered.trimmed.paired.fastq… RNA-Seq 1.5 GB
NT-BGRSLV08-1_S39_L003_R1_001.filtered.trimmed.paired.fastq… RNA-Seq 1.4 GB
NT-BGRSLV08-2_S40_L003_R1_001.filtered.trimmed.paired.fastq… RNA-Seq 1.4 GB
NUFIP1-BGRSLV04-27_S13_L001_R1_001.filtered.trimmed.paired.… RNA-Seq 3.3 GB
NUFIP1-BGRSLV04-28_S14_L001_R1_001.filtered.trimmed.paired.… RNA-Seq 2.7 GB
PAN3-BGRSLV04-29_S15_L001_R1_001.filtered.trimmed.paired.fa… RNA-Seq 2.8 GB
PAN3-BGRSLV04-30_S16_L001_R1_001.filtered.trimmed.paired.fa… RNA-Seq 2.4 GB
PCGF1-BGRSLV04-31_S17_L001_R1_001.filtered.trimmed.paired.f… RNA-Seq 3.4 GB
PCGF1-BGRSLV04-32_S18_L001_R1_001.filtered.trimmed.paired.f… RNA-Seq 3.3 GB
PHF11-BGRSLV02-33_S111_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 2.5 GB
PHF11-BGRSLV02-34_S112_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 2.5 GB
PHF14-BGRSLV06-13_S73_L002_R1_001.filtered.trimmed.paired.f… RNA-Seq 1.6 GB
PHF14-BGRSLV06-14_S74_L002_R1_001.filtered.trimmed.paired.f… RNA-Seq 1.6 GB
PHF7-BGRSLV04-35_S19_L001_R1_001.filtered.trimmed.paired.fa… RNA-Seq 3.5 GB
PHF7-BGRSLV04-36_S20_L001_R1_001.filtered.trimmed.paired.fa… RNA-Seq 2.9 GB
PIAS4-BGRSLV06-15_S75_L002_R1_001.filtered.trimmed.paired.f… RNA-Seq 2.8 GB
PIAS4-BGRSLV06-16_S76_L002_R1_001.filtered.trimmed.paired.f… RNA-Seq 1.9 GB
PML-BGRSLV04-37_S21_L001_R1_001.filtered.trimmed.paired.fas… RNA-Seq 3.7 GB
PML-BGRSLV04-38_S22_L001_R1_001.filtered.trimmed.paired.fas… RNA-Seq 2.4 GB
PRR3-BGRSLV04-39_S23_L001_R1_001.filtered.trimmed.paired.fa… RNA-Seq 3.9 GB
PRR3-BGRSLV04-40_S24_L001_R1_001.filtered.trimmed.paired.fa… RNA-Seq 2.9 GB
RBBP6-BGRSLV06-19_S77_L002_R1_001.filtered.trimmed.paired.f… RNA-Seq 1.7 GB
RBBP6-BGRSLV06-20_S78_L002_R1_001.filtered.trimmed.paired.f… RNA-Seq 1.9 GB
RBM4B-BGRSLV04-43_S25_L001_R1_001.filtered.trimmed.paired.f… RNA-Seq 3.1 GB
RBM4B-BGRSLV04-44_S26_L001_R1_001.filtered.trimmed.paired.f… RNA-Seq 3.2 GB
RBM5-BGRSDLV02-53_S49_L001_R1_001.filtered.trimmed.paired.f… RNA-Seq 2.5 GB
RBM5-BGRSDLV02-54_S50_L001_R1_001.filtered.trimmed.paired.f… RNA-Seq 2.1 GB
RC3H2-BGRSLV04-45_S27_L001_R1_001.filtered.trimmed.paired.f… RNA-Seq 4.0 GB
RC3H2-BGRSLV04-46_S28_L001_R1_001.filtered.trimmed.paired.f… RNA-Seq 2.6 GB
REPIN1-BGRSLV07-17_S25_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 1.4 GB
REPIN1-BGRSLV07-18_S26_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 1.5 GB
RFFL-BGRSLV04-47_S29_L001_R1_001.filtered.trimmed.paired.fa… RNA-Seq 3.9 GB
RFFL-BGRSLV04-48_S30_L001_R1_001.filtered.trimmed.paired.fa… RNA-Seq 3.5 GB
RNF113A-BGRSLV06-29_S79_L002_R1_001.filtered.trimmed.paired… RNA-Seq 3.1 GB
RNF113A-BGRSLV06-30_S80_L002_R1_001.filtered.trimmed.paired… RNA-Seq 1.9 GB
RNF150-BGRSLV05-7_S47_L002_R1_001.filtered.trimmed.paired.f… RNA-Seq 2.3 GB
RNF150-BGRSLV05-8_S48_L002_R1_001.filtered.trimmed.paired.f… RNA-Seq 1.3 GB
RNF20-BGRSLV02-49_S125_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 4.8 GB
RNF20-BGRSLV02-50_S126_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 2.2 GB
RNF214-BGRSLV07-19_S27_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 2.2 GB
RNF214-BGRSLV07-20_S28_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 2.7 GB
RNF26-BGRSLV06-31_S81_L002_R1_001.filtered.trimmed.paired.f… RNA-Seq 3.3 GB
RNF26-BGRSLV06-32_S82_L002_R1_001.filtered.trimmed.paired.f… RNA-Seq 1.6 GB
RNF31-BGRSLV07-21_S29_L003_R1_001.filtered.trimmed.paired.f… RNA-Seq 1.3 GB
RNF31-BGRSLV07-22_S30_L003_R1_001.filtered.trimmed.paired.f… RNA-Seq 1.2 GB
RNF41-BGRSLV04-53_S31_L001_R1_001.filtered.trimmed.paired.f… RNA-Seq 3.3 GB
RNF41-BGRSLV04-54_S32_L001_R1_001.filtered.trimmed.paired.f… RNA-Seq 3.2 GB
RNF43-BGRSLV06-33_S83_L002_R1_001.filtered.trimmed.paired.f… RNA-Seq 1.7 GB
RNF43-BGRSLV06-34_S84_L002_R1_001.filtered.trimmed.paired.f… RNA-Seq 2.3 GB
RYBP-BGRSLV06-35_S85_L002_R1_001.filtered.trimmed.paired.fa… RNA-Seq 1.7 GB
RYBP-BGRSLV06-36_S86_L002_R1_001.filtered.trimmed.paired.fa… RNA-Seq 2.7 GB
SEC23B-BGRSLV06-37_S87_L002_R1_001.filtered.trimmed.paired.… RNA-Seq 1.6 GB
SEC23B-BGRSLV06-38_S88_L002_R1_001.filtered.trimmed.paired.… RNA-Seq 2.8 GB
SNRNP48-BGRSLV03-45_S159_L004_R1_001.filtered.trimmed.paire… RNA-Seq 8.0 GB
SNRNP48-BGRSLV03-46_S160_L004_R1_001.filtered.trimmed.paire… RNA-Seq 3.5 GB
SRR30663014_GSM8515441 RNA-Seq 2.3 GB
SRR30663015_GSM8515440 RNA-Seq 1.3 GB
SRR30663016_GSM8515399 RNA-Seq 2.9 GB
SRR30663017_GSM8515398 RNA-Seq 2.5 GB
SRR30663018_GSM8515397 RNA-Seq 2.7 GB
SRR30663019_GSM8515396 RNA-Seq 6.4 GB
SRR30663020_GSM8515395 RNA-Seq 2.8 GB
SRR30663021_GSM8515394 RNA-Seq 3.5 GB
SRR30663022_GSM8515393 RNA-Seq 3.0 GB
SRR30663023_GSM8515392 RNA-Seq 2.5 GB
SRR30663024_GSM8515391 RNA-Seq 2.6 GB
SRR30663025_GSM8515390 RNA-Seq 3.0 GB
SRR30663026_GSM8515389 RNA-Seq 1.8 GB
SRR30663027_GSM8515388 RNA-Seq 2.2 GB
SRR30663028_GSM8515387 RNA-Seq 1.4 GB
SRR30663029_GSM8515386 RNA-Seq 1.6 GB
SRR30663030_GSM8515385 RNA-Seq 1.3 GB
SRR30663031_GSM8515384 RNA-Seq 3.0 GB
SRR30663032_GSM8515383 RNA-Seq 2.5 GB
SRR30663033_GSM8515382 RNA-Seq 3.5 GB
SRR30663034_GSM8515381 RNA-Seq 1.3 GB
SRR30663035_GSM8515380 RNA-Seq 2.3 GB
SRR30663036_GSM8515379 RNA-Seq 1.4 GB
SRR30663037_GSM8515378 RNA-Seq 2.1 GB
SRR30663038_GSM8515377 RNA-Seq 3.7 GB
SRR30663039_GSM8515376 RNA-Seq 3.7 GB
SRR30663040_GSM8515375 RNA-Seq 3.2 GB
SRR30663041_GSM8515374 RNA-Seq 2.6 GB
SRR30663042_GSM8515373 RNA-Seq 1.6 GB
SRR30663043_GSM8515372 RNA-Seq 1.7 GB
SRR30663044_GSM8515371 RNA-Seq 2.2 GB
SRR30663045_GSM8515370 RNA-Seq 2.7 GB
SRR30663046_GSM8515369 RNA-Seq 2.2 GB
SRR30663047_GSM8515368 RNA-Seq 2.0 GB
SRR30663048_GSM8515367 RNA-Seq 1.6 GB
SRR30663049_GSM8515366 RNA-Seq 1.4 GB
SRR30663050_GSM8515365 RNA-Seq 1.3 GB
SRR30663051_GSM8515364 RNA-Seq 1.4 GB
SRR30663052_GSM8515363 RNA-Seq 3.0 GB
SRR30663053_GSM8515362 RNA-Seq 4.6 GB
SRR30663054_GSM8515361 RNA-Seq 2.1 GB
SRR30663055_GSM8515360 RNA-Seq 1.7 GB
SRR30663056_GSM8515339 RNA-Seq 1.7 GB
SRR30663057_GSM8515338 RNA-Seq 2.4 GB
SRR30663058_GSM8515337 RNA-Seq 3.5 GB
SRR30663059_GSM8515336 RNA-Seq 8.0 GB
SRR30663060_GSM8515335 RNA-Seq 2.8 GB
SRR30663061_GSM8515334 RNA-Seq 1.6 GB
SRR30663062_GSM8515333 RNA-Seq 2.7 GB
SRR30663063_GSM8515332 RNA-Seq 1.7 GB
SRR30663064_GSM8515331 RNA-Seq 2.3 GB
SRR30663065_GSM8515330 RNA-Seq 1.7 GB
SRR30663066_GSM8515329 RNA-Seq 3.2 GB
SRR30663067_GSM8515328 RNA-Seq 3.3 GB
SRR30663068_GSM8515327 RNA-Seq 1.2 GB
SRR30663069_GSM8515326 RNA-Seq 1.3 GB
SRR30663070_GSM8515325 RNA-Seq 1.6 GB
SRR30663071_GSM8515324 RNA-Seq 3.3 GB
SRR30663072_GSM8515323 RNA-Seq 2.7 GB
SRR30663073_GSM8515322 RNA-Seq 2.2 GB
SRR30663074_GSM8515321 RNA-Seq 2.2 GB
SRR30663075_GSM8515320 RNA-Seq 4.8 GB
SRR30663076_GSM8515299 RNA-Seq 1.9 GB
SRR30663077_GSM8515298 RNA-Seq 2.8 GB
SRR30663078_GSM8515297 RNA-Seq 2.9 GB
SRR30663079_GSM8515296 RNA-Seq 3.5 GB
SRR30663080_GSM8515295 RNA-Seq 1.6 GB
SRR30663081_GSM8515294 RNA-Seq 1.6 GB
SRR30663082_GSM8515293 RNA-Seq 2.5 GB
SRR30663083_GSM8515292 RNA-Seq 2.5 GB
SRR30663084_GSM8515291 RNA-Seq 3.3 GB
SRR30663085_GSM8515290 RNA-Seq 3.4 GB
SRR30663086_GSM8515289 RNA-Seq 2.4 GB
SRR30663087_GSM8515288 RNA-Seq 2.8 GB
SRR30663088_GSM8515287 RNA-Seq 2.7 GB
SRR30663089_GSM8515286 RNA-Seq 3.3 GB
SRR30663090_GSM8515285 RNA-Seq 1.4 GB
SRR30663091_GSM8515284 RNA-Seq 1.4 GB
SRR30663092_GSM8515283 RNA-Seq 1.5 GB
SRR30663093_GSM8515282 RNA-Seq 1.9 GB
SRR30663094_GSM8515281 RNA-Seq 1.6 GB
SRR30663095_GSM8515280 RNA-Seq 3.0 GB
SRR30663096_GSM8515439 RNA-Seq 2.2 GB
SRR30663097_GSM8515438 RNA-Seq 2.6 GB
SRR30663098_GSM8515437 RNA-Seq 2.7 GB
SRR30663099_GSM8515436 RNA-Seq 3.3 GB
SRR30663100_GSM8515435 RNA-Seq 3.2 GB
SRR30663101_GSM8515434 RNA-Seq 3.4 GB
SRR30663102_GSM8515433 RNA-Seq 2.1 GB
SRR30663103_GSM8515432 RNA-Seq 1.4 GB
SRR30663104_GSM8515431 RNA-Seq 2.3 GB
SRR30663105_GSM8515430 RNA-Seq 2.3 GB
SRR30663106_GSM8515429 RNA-Seq 2.0 GB
SRR30663107_GSM8515428 RNA-Seq 1.8 GB
SRR30663108_GSM8515427 RNA-Seq 3.2 GB
SRR30663109_GSM8515426 RNA-Seq 2.4 GB
SRR30663110_GSM8515425 RNA-Seq 3.4 GB
SRR30663111_GSM8515424 RNA-Seq 1.6 GB
SRR30663112_GSM8515423 RNA-Seq 1.7 GB
SRR30663113_GSM8515422 RNA-Seq 1.7 GB
SRR30663114_GSM8515421 RNA-Seq 1.5 GB
SRR30663115_GSM8515420 RNA-Seq 1.6 GB
SRR30663116_GSM8515359 RNA-Seq 3.5 GB
SRR30663117_GSM8515358 RNA-Seq 4.1 GB
SRR30663118_GSM8515357 RNA-Seq 1.6 GB
SRR30663119_GSM8515356 RNA-Seq 2.1 GB
SRR30663120_GSM8515355 RNA-Seq 1.9 GB
SRR30663121_GSM8515354 RNA-Seq 2.7 GB
SRR30663122_GSM8515353 RNA-Seq 1.5 GB
SRR30663123_GSM8515352 RNA-Seq 2.7 GB
SRR30663124_GSM8515351 RNA-Seq 2.6 GB
SRR30663125_GSM8515350 RNA-Seq 2.5 GB
SRR30663126_GSM8515349 RNA-Seq 1.5 GB
SRR30663127_GSM8515348 RNA-Seq 1.7 GB
SRR30663128_GSM8515347 RNA-Seq 2.5 GB
SRR30663129_GSM8515346 RNA-Seq 3.3 GB
SRR30663130_GSM8515345 RNA-Seq 3.0 GB
SRR30663131_GSM8515344 RNA-Seq 2.8 GB
SRR30663132_GSM8515343 RNA-Seq 3.1 GB
SRR30663133_GSM8515342 RNA-Seq 1.4 GB
SRR30663134_GSM8515341 RNA-Seq 1.8 GB
SRR30663135_GSM8515340 RNA-Seq 1.2 GB
SRR30663136_GSM8515319 RNA-Seq 1.3 GB
SRR30663137_GSM8515318 RNA-Seq 2.3 GB
SRR30663138_GSM8515317 RNA-Seq 1.9 GB
SRR30663139_GSM8515316 RNA-Seq 3.1 GB
SRR30663140_GSM8515315 RNA-Seq 3.5 GB
SRR30663141_GSM8515314 RNA-Seq 3.9 GB
SRR30663142_GSM8515313 RNA-Seq 1.5 GB
SRR30663143_GSM8515312 RNA-Seq 1.4 GB
SRR30663144_GSM8515311 RNA-Seq 2.6 GB
SRR30663145_GSM8515310 RNA-Seq 4.0 GB
SRR30663146_GSM8515309 RNA-Seq 2.1 GB
SRR30663147_GSM8515308 RNA-Seq 2.5 GB
SRR30663148_GSM8515307 RNA-Seq 3.2 GB
SRR30663149_GSM8515306 RNA-Seq 3.1 GB
SRR30663150_GSM8515305 RNA-Seq 1.9 GB
SRR30663151_GSM8515304 RNA-Seq 1.7 GB
SRR30663152_GSM8515303 RNA-Seq 2.9 GB
SRR30663153_GSM8515302 RNA-Seq 3.9 GB
SRR30663154_GSM8515301 RNA-Seq 2.4 GB
SRR30663155_GSM8515300 RNA-Seq 3.7 GB
SRR30663156_GSM8515259 RNA-Seq 2.2 GB
SRR30663157_GSM8515258 RNA-Seq 2.4 GB
SRR30663158_GSM8515257 RNA-Seq 1.6 GB
SRR30663159_GSM8515256 RNA-Seq 1.7 GB
SRR30663160_GSM8515255 RNA-Seq 1.8 GB
SRR30663161_GSM8515254 RNA-Seq 2.3 GB
SRR30663162_GSM8515253 RNA-Seq 2.8 GB
SRR30663163_GSM8515252 RNA-Seq 2.1 GB
SRR30663164_GSM8515251 RNA-Seq 1.7 GB
SRR30663165_GSM8515250 RNA-Seq 2.2 GB
SRR30663166_GSM8515249 RNA-Seq 1.9 GB
SRR30663167_GSM8515248 RNA-Seq 2.8 GB
SRR30663168_GSM8515247 RNA-Seq 2.8 GB
SRR30663169_GSM8515246 RNA-Seq 3.0 GB
SRR30663170_GSM8515245 RNA-Seq 2.4 GB
SRR30663171_GSM8515244 RNA-Seq 2.9 GB
SRR30663172_GSM8515243 RNA-Seq 1.5 GB
SRR30663173_GSM8515242 RNA-Seq 2.5 GB
SRR30663174_GSM8515241 RNA-Seq 1.3 GB
SRR30663175_GSM8515240 RNA-Seq 1.6 GB
SRR30663176_GSM8515419 RNA-Seq 2.7 GB
SRR30663177_GSM8515418 RNA-Seq 2.8 GB
SRR30663178_GSM8515417 RNA-Seq 2.7 GB
SRR30663179_GSM8515416 RNA-Seq 2.4 GB
SRR30663180_GSM8515415 RNA-Seq 2.2 GB
SRR30663181_GSM8515414 RNA-Seq 3.2 GB
SRR30663182_GSM8515413 RNA-Seq 1.7 GB
SRR30663183_GSM8515412 RNA-Seq 2.9 GB
SRR30663184_GSM8515411 RNA-Seq 2.6 GB
SRR30663185_GSM8515410 RNA-Seq 3.8 GB
SRR30663186_GSM8515409 RNA-Seq 1.4 GB
SRR30663187_GSM8515408 RNA-Seq 1.5 GB
SRR30663188_GSM8515407 RNA-Seq 2.1 GB
SRR30663189_GSM8515406 RNA-Seq 1.6 GB
SRR30663190_GSM8515405 RNA-Seq 2.6 GB
SRR30663191_GSM8515404 RNA-Seq 1.4 GB
SRR30663192_GSM8515403 RNA-Seq 3.1 GB
SRR30663193_GSM8515402 RNA-Seq 2.5 GB
SRR30663194_GSM8515401 RNA-Seq 2.8 GB
SRR30663195_GSM8515400 RNA-Seq 2.4 GB
SRR30663196_GSM8515279 RNA-Seq 2.2 GB
SRR30663197_GSM8515278 RNA-Seq 3.2 GB
SRR30663198_GSM8515277 RNA-Seq 3.4 GB
SRR30663199_GSM8515276 RNA-Seq 4.1 GB
SRR30663200_GSM8515275 RNA-Seq 2.9 GB
SRR30663201_GSM8515274 RNA-Seq 2.5 GB
SRR30663202_GSM8515273 RNA-Seq 1.7 GB
SRR30663203_GSM8515272 RNA-Seq 3.1 GB
SRR30663204_GSM8515271 RNA-Seq 1.7 GB
SRR30663205_GSM8515270 RNA-Seq 2.9 GB
SRR30663206_GSM8515269 RNA-Seq 3.7 GB
SRR30663207_GSM8515268 RNA-Seq 3.0 GB
SRR30663208_GSM8515267 RNA-Seq 2.3 GB
SRR30663209_GSM8515266 RNA-Seq 3.5 GB
SRR30663210_GSM8515265 RNA-Seq 2.3 GB
SRR30663211_GSM8515264 RNA-Seq 1.8 GB
SRR30663212_GSM8515263 RNA-Seq 2.7 GB
SRR30663213_GSM8515262 RNA-Seq 2.8 GB
SRR30663214_GSM8515261 RNA-Seq 3.8 GB
SRR30663215_GSM8515260 RNA-Seq 3.4 GB
SRR30663216_GSM8515239 RNA-Seq 2.5 GB
SRR30663217_GSM8515238 RNA-Seq 3.2 GB
SRR30663218_GSM8515237 RNA-Seq 1.1 GB
SRR30663219_GSM8515236 RNA-Seq 2.6 GB
SRR30663220_GSM8515235 RNA-Seq 3.0 GB
SRR30663221_GSM8515234 RNA-Seq 3.3 GB
SRR30663222_GSM8515233 RNA-Seq 2.1 GB
SRR30663223_GSM8515232 RNA-Seq 2.3 GB
SRR30663224_GSM8515231 RNA-Seq 1.8 GB
SRR30663225_GSM8515230 RNA-Seq 3.5 GB
SRR30663226_GSM8515229 RNA-Seq 2.0 GB
SRR30663227_GSM8515228 RNA-Seq 3.2 GB
SRR30663228_GSM8515227 RNA-Seq 2.5 GB
SRR30663229_GSM8515226 RNA-Seq 2.7 GB
SRR30663230_GSM8515225 RNA-Seq 3.9 GB
SRR30663231_GSM8515224 RNA-Seq 3.1 GB
SRR30663232_GSM8515223 RNA-Seq 1.7 GB
SRR30663233_GSM8515222 RNA-Seq 2.7 GB
SRR30663234_GSM8515221 RNA-Seq 2.5 GB
SRR30663235_GSM8515220 RNA-Seq 2.5 GB
SRR30663236_GSM8515219 RNA-Seq 4.8 GB
SRR30663237_GSM8515218 RNA-Seq 2.4 GB
SRR30663238_GSM8515217 RNA-Seq 2.8 GB
SRR30663239_GSM8515216 RNA-Seq 2.9 GB
SRR30663240_GSM8515215 RNA-Seq 2.8 GB
SRR30663241_GSM8515214 RNA-Seq 3.6 GB
SRR30663242_GSM8515213 RNA-Seq 3.0 GB
SRR30663243_GSM8515212 RNA-Seq 3.3 GB
SRR30663244_GSM8515211 RNA-Seq 2.7 GB
SRR30663245_GSM8515210 RNA-Seq 3.0 GB
SRR30663246_GSM8515209 RNA-Seq 1.8 GB
SRR30663247_GSM8515208 RNA-Seq 1.6 GB
SRR30663248_GSM8515207 RNA-Seq 2.3 GB
SRR30663249_GSM8515206 RNA-Seq 4.4 GB
SRR30663250_GSM8515205 RNA-Seq 2.7 GB
SRR30663251_GSM8515204 RNA-Seq 2.4 GB
SRR30663252_GSM8515203 RNA-Seq 1.5 GB
SRR30663253_GSM8515202 RNA-Seq 1.6 GB
SRR30663254_GSM8515201 RNA-Seq 3.2 GB
SRR30663255_GSM8515200 RNA-Seq 3.2 GB
TAF15-BGRSLV02-10_S92_L003_R1_001.filtered.trimmed.paired.f… RNA-Seq 2.4 GB
TAF15-BGRSLV02-9_S91_L003_R1_001.filtered.trimmed.paired.fa… RNA-Seq 1.7 GB
TRIM28-BGRSLV06-43_S89_L002_R1_001.filtered.trimmed.paired.… RNA-Seq 1.4 GB
TRIM28-BGRSLV06-44_S90_L002_R1_001.filtered.trimmed.paired.… RNA-Seq 3.1 GB
TRIM2-BGRSLV07-23_S31_L003_R1_001.filtered.trimmed.paired.f… RNA-Seq 1.2 GB
TRIM2-BGRSLV07-24_S32_L003_R1_001.filtered.trimmed.paired.f… RNA-Seq 1.8 GB
TRIM32-BGRSLV05-21_S49_L002_R1_001.filtered.trimmed.paired.… RNA-Seq 2.8 GB
TRIM32-BGRSLV05-22_S50_L002_R1_001.filtered.trimmed.paired.… RNA-Seq 3.0 GB
TRIP4-BGRSLV02-47_S123_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 3.3 GB
TRIP4-BGRSLV02-48_S124_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 2.5 GB
TRMU-BGRSLV05-27_S51_L002_R1_001.filtered.trimmed.paired.fa… RNA-Seq 1.7 GB
TRMU-BGRSLV05-28_S52_L002_R1_001.filtered.trimmed.paired.fa… RNA-Seq 1.5 GB
TTF2-BGRSLV02-39_S117_L003_R1_001.filtered.trimmed.paired.f… RNA-Seq 2.5 GB
TTF2-BGRSLV02-40_S118_L003_R1_001.filtered.trimmed.paired.f… RNA-Seq 2.6 GB
TUT1-BGRSLV06-47_S91_L002_R1_001.filtered.trimmed.paired.fa… RNA-Seq 2.7 GB
TUT1-BGRSLV06-48_S92_L002_R1_001.filtered.trimmed.paired.fa… RNA-Seq 1.5 GB
U2AF1-BGRSLV02-17_S95_L003_R1_001.filtered.trimmed.paired.f… RNA-Seq 2.7 GB
U2AF1-BGRSLV02-18_S96_L003_R1_001.filtered.trimmed.paired.f… RNA-Seq 1.9 GB
U2AF1L4-BGRSLV05-31_S53_L002_R1_001.filtered.trimmed.paired… RNA-Seq 2.1 GB
U2AF1L4-BGRSLV05-32_S54_L002_R1_001.filtered.trimmed.paired… RNA-Seq 1.6 GB
UBR7-BGRSLV04-61_S33_L001_R1_001.filtered.trimmed.paired.fa… RNA-Seq 4.1 GB
UBR7-BGRSLV04-62_S34_L001_R1_001.filtered.trimmed.paired.fa… RNA-Seq 3.5 GB
USP39-BGRSLV05-39_S55_L002_R1_001.filtered.trimmed.paired.f… RNA-Seq 1.7 GB
USP39-BGRSLV05-40_S56_L002_R1_001.filtered.trimmed.paired.f… RNA-Seq 2.1 GB
USP44-BGRSLV04-63_S35_L001_R1_001.filtered.trimmed.paired.f… RNA-Seq 4.6 GB
USP44-BGRSLV04-64_S36_L001_R1_001.filtered.trimmed.paired.f… RNA-Seq 3.0 GB
WBP4-BGRSLV08-3_S41_L003_R1_001.filtered.trimmed.paired.fas… RNA-Seq 1.4 GB
WBP4-BGRSLV08-4_S42_L003_R1_001.filtered.trimmed.paired.fas… RNA-Seq 1.3 GB
YAF2-BGRSLV08-5_S43_L003_R1_001.filtered.trimmed.paired.fas… RNA-Seq 1.4 GB
YAF2-BGRSLV08-6_S44_L003_R1_001.filtered.trimmed.paired.fas… RNA-Seq 1.6 GB
ZC3H18-BGRSLV02-65_S131_L003_R1_001.filtered.trimmed.paired… RNA-Seq 2.0 GB
ZC3H18-BGRSLV02-66_S132_L003_R1_001.filtered.trimmed.paired… RNA-Seq 2.2 GB
ZC3H3-BGRSLV03-49_S161_L004_R1_001.filtered.trimmed.paired.… RNA-Seq 2.7 GB
ZC3H3-BGRSLV03-50_S162_L004_R1_001.filtered.trimmed.paired.… RNA-Seq 2.2 GB
ZC3H7A-BGRSLV08-7_S45_L003_R1_001.filtered.trimmed.paired.f… RNA-Seq 1.7 GB
ZC3H7A-BGRSLV08-8_S46_L003_R1_001.filtered.trimmed.paired.f… RNA-Seq 1.6 GB
ZC3H8-BGRSLV02-19_S97_L003_R1_001.filtered.trimmed.paired.f… RNA-Seq 2.6 GB
ZC3H8-BGRSLV02-20_S98_L003_R1_001.filtered.trimmed.paired.f… RNA-Seq 3.2 GB
ZC3HC1-BGRSLV04-65_S37_L001_R1_001.filtered.trimmed.paired.… RNA-Seq 3.7 GB
ZC3HC1-BGRSLV04-66_S38_L001_R1_001.filtered.trimmed.paired.… RNA-Seq 3.7 GB
ZCCHC10-BGRSLV07-43_S33_L003_R1_001.filtered.trimmed.paired… RNA-Seq 2.1 GB
ZCCHC10-BGRSLV07-44_S34_L003_R1_001.filtered.trimmed.paired… RNA-Seq 1.4 GB
ZCCHC24-BGRSLV08-10_S48_L003_R1_001.filtered.trimmed.paired… RNA-Seq 2.3 GB
ZCCHC24-BGRSLV08-9_S47_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 1.3 GB
ZCCHC7-BGRSLV02-51_S127_L003_R1_001.filtered.trimmed.paired… RNA-Seq 3.5 GB
ZCCHC7-BGRSLV02-52_S128_L003_R1_001.filtered.trimmed.paired… RNA-Seq 2.5 GB
ZCCHC9-BGRSLV05-51_S57_L002_R1_001.filtered.trimmed.paired.… RNA-Seq 3.0 GB
ZCCHC9-BGRSLV05-52_S58_L002_R1_001.filtered.trimmed.paired.… RNA-Seq 1.3 GB
ZCRB1-BGRSLV05-55_S59_L002_R1_001.filtered.trimmed.paired.f… RNA-Seq 1.6 GB
ZCRB1-BGRSLV05-56_S60_L002_R1_001.filtered.trimmed.paired.f… RNA-Seq 1.4 GB
ZCWPW1-BGRSLV05-57_S61_L002_R1_001.filtered.trimmed.paired.… RNA-Seq 2.2 GB
ZCWPW1-BGRSLV05-58_S62_L002_R1_001.filtered.trimmed.paired.… RNA-Seq 1.8 GB
ZDHHC5-BGRSLV05-59_S63_L002_R1_001.filtered.trimmed.paired.… RNA-Seq 3.0 GB
ZDHHC5-BGRSLV05-60_S64_L002_R1_001.filtered.trimmed.paired.… RNA-Seq 2.6 GB
ZFP36L1-BGRSLV03-51_S163_L004_R1_001.filtered.trimmed.paire… RNA-Seq 2.5 GB
ZFP36L1-BGRSLV03-52_S164_L004_R1_001.filtered.trimmed.paire… RNA-Seq 3.0 GB
ZFP37-BGRSLV02-37_S115_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 3.5 GB
ZFP37-BGRSLV02-38_S116_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 2.8 GB
ZIC3-BGRSLV02-31_S109_L003_R1_001.filtered.trimmed.paired.f… RNA-Seq 6.4 GB
ZIC3-BGRSLV02-32_S110_L003_R1_001.filtered.trimmed.paired.f… RNA-Seq 2.7 GB
ZMAT2-BGRSLV05-67_S65_L002_R1_001.filtered.trimmed.paired.f… RNA-Seq 2.5 GB
ZMAT2-BGRSLV05-68_S66_L002_R1_001.filtered.trimmed.paired.f… RNA-Seq 2.9 GB
ZMAT3-BGRSLV03-53_S165_L004_R1_001.filtered.trimmed.paired.… RNA-Seq 2.4 GB
ZMAT3-BGRSLV03-54_S166_L004_R1_001.filtered.trimmed.paired.… RNA-Seq 2.8 GB
ZMAT5-BGRSLV03-55_S167_L004_R1_001.filtered.trimmed.paired.… RNA-Seq 2.5 GB
ZMAT5-BGRSLV03-56_S168_L004_R1_001.filtered.trimmed.paired.… RNA-Seq 3.1 GB
ZNF169-BGRSLV06-53_S95_L002_R1_001.filtered.trimmed.paired.… RNA-Seq 1.6 GB
ZNF169-BGRSLV06-54_S96_L002_R1_001.filtered.trimmed.paired.… RNA-Seq 2.1 GB
ZNF16-BGRSLV06-51_S93_L002_R1_001.filtered.trimmed.paired.f… RNA-Seq 1.4 GB
ZNF16-BGRSLV06-52_S94_L002_R1_001.filtered.trimmed.paired.f… RNA-Seq 2.6 GB
ZNF184-BGRSLV08-19_S49_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 1.5 GB
ZNF184-BGRSLV08-20_S50_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 1.4 GB
ZNF214-BGRSLV07-59_S35_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 2.9 GB
ZNF214-BGRSLV07-60_S36_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 1.7 GB
ZNF22-BGRSLV02-35_S113_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 3.2 GB
ZNF22-BGRSLV02-36_S114_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 2.2 GB
ZNF277-BGRSLV03-59_S171_L004_R1_001.filtered.trimmed.paired… RNA-Seq 2.4 GB
ZNF277-BGRSLV03-60_S172_L004_R1_001.filtered.trimmed.paired… RNA-Seq 2.7 GB
ZNF2-BGRSLV03-57_S169_L004_R1_001.filtered.trimmed.paired.f… RNA-Seq 3.8 GB
ZNF2-BGRSLV03-58_S170_L004_R1_001.filtered.trimmed.paired.f… RNA-Seq 2.6 GB
ZNF317-BGRSLV03-61_S173_L004_R1_001.filtered.trimmed.paired… RNA-Seq 2.8 GB
ZNF317-BGRSLV03-62_S174_L004_R1_001.filtered.trimmed.paired… RNA-Seq 2.7 GB
ZNF346-BGRSLV07-65_S37_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 1.6 GB
ZNF346-BGRSLV07-66_S38_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 1.5 GB
ZNF354A-BGRSLV08-25_S51_L003_R1_001.filtered.trimmed.paired… RNA-Seq 1.7 GB
ZNF354A-BGRSLV08-26_S52_L003_R1_001.filtered.trimmed.paired… RNA-Seq 1.7 GB
ZNF385C-BGRSLV08-31_S53_L003_R1_001.filtered.trimmed.paired… RNA-Seq 1.6 GB
ZNF385C-BGRSLV08-32_S54_L003_R1_001.filtered.trimmed.paired… RNA-Seq 3.4 GB
ZNF473-BGRSDLV02-89_S73_L001_R1_001.filtered.trimmed.paired… RNA-Seq 2.4 GB
ZNF473-BGRSDLV02-90_S74_L001_R1_001.filtered.trimmed.paired… RNA-Seq 3.2 GB
ZNF593-BGRSLV08-35_S55_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 1.8 GB
ZNF593-BGRSLV08-36_S56_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 2.0 GB
ZNF706-BGRSLV03-67_S175_L004_R1_001.filtered.trimmed.paired… RNA-Seq 2.3 GB
ZNF706-BGRSLV03-68_S176_L004_R1_001.filtered.trimmed.paired… RNA-Seq 2.3 GB
ZNF770-BGRSLV08-49_S57_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 1.4 GB
ZNF770-BGRSLV08-50_S58_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 2.1 GB
ZNF800-BGRSLV02-41_S119_L003_R1_001.filtered.trimmed.paired… RNA-Seq 3.4 GB
ZNF800-BGRSLV02-42_S120_L003_R1_001.filtered.trimmed.paired… RNA-Seq 3.2 GB
ZNHIT3-BGRSLV02-45_S121_L003_R1_001.filtered.trimmed.paired… RNA-Seq 3.3 GB
ZNHIT3-BGRSLV02-46_S122_L003_R1_001.filtered.trimmed.paired… RNA-Seq 2.7 GB
ZRANB2-BGRSLV02-21_S99_L003_R1_001.filtered.trimmed.paired.… RNA-Seq 2.6 GB
ZRANB2-BGRSLV02-22_S100_L003_R1_001.filtered.trimmed.paired… RNA-Seq 2.2 GB
ZXDC-BGRSLV08-61_S59_L003_R1_001.filtered.trimmed.paired.fa… RNA-Seq 1.3 GB
ZXDC-BGRSLV08-62_S60_L003_R1_001.filtered.trimmed.paired.fa… RNA-Seq 2.3 GB
GSE277161 GSE · via ncbi_elink
GEO ↗

Integrated multi-omics analysis of zinc finger proteins uncovers roles in RNA regulation [Ribo-STAMP cell lines]

Homo sapiens

80 data files
FileTypeSize
CNOT4-BGRSDLV03-5_S5_L001_R1_001.filtered.trimmed.paired.fa… RNA-Seq 805.1 MB
CNOT4-BGRSDLV03-6_S6_L001_R1_001.filtered.trimmed.paired.fa… RNA-Seq 718.3 MB
CNOT4-BGRSDLV03-7dox_S7_L001_R1_001.filtered.trimmed.paired… RNA-Seq 724.2 MB
CNOT4-BGRSDLV03-8dox_S8_L001_R1_001.filtered.trimmed.paired… RNA-Seq 788.5 MB
CPSF4-BGRSDLV03-10_S10_L001_R1_001.filtered.trimmed.paired.… RNA-Seq 700.4 MB
CPSF4-BGRSDLV03-11dox_S11_L001_R1_001.filtered.trimmed.pair… RNA-Seq 709.5 MB
CPSF4-BGRSDLV03-12dox_S12_L001_R1_001.filtered.trimmed.pair… RNA-Seq 800.0 MB
CPSF4-BGRSDLV03-9_S9_L001_R1_001.filtered.trimmed.paired.fa… RNA-Seq 647.7 MB
ERI2-BGRSDLV03-13_S13_L001_R1_001.filtered.trimmed.paired.f… RNA-Seq 787.6 MB
ERI2-BGRSDLV03-14_merged_R1_001.filtered.trimmed.paired.fas… RNA-Seq 1.1 GB
ERI2-BGRSDLV03-15dox_S15_L001_R1_001.filtered.trimmed.paire… RNA-Seq 693.3 MB
ERI2-BGRSDLV03-16dox_S16_L001_R1_001.filtered.trimmed.paire… RNA-Seq 621.8 MB
FUS-BGRSDLV03-17_S17_L001_R1_001.filtered.trimmed.paired.fa… RNA-Seq 679.8 MB
FUS-BGRSDLV03-18_merged_R1_001.filtered.trimmed.paired.fast… RNA-Seq 1.1 GB
FUS-BGRSDLV03-19dox_S19_L001_R1_001.filtered.trimmed.paired… RNA-Seq 680.0 MB
FUS-BGRSDLV03-20dox_merged_R1_001.filtered.trimmed.paired.f… RNA-Seq 1.3 GB
MBNL1-BGRSDLV03-25_S21_L001_R1_001.filtered.trimmed.paired.… RNA-Seq 665.8 MB
MBNL1-BGRSDLV03-26_S22_L001_R1_001.filtered.trimmed.paired.… RNA-Seq 623.3 MB
MBNL1-BGRSDLV03-27dox_S23_L001_R1_001.filtered.trimmed.pair… RNA-Seq 684.3 MB
MBNL1-BGRSDLV03-28dox_S24_L001_R1_001.filtered.trimmed.pair… RNA-Seq 613.8 MB
NT-BGRSDLV03-1_merged_R1_001.filtered.trimmed.paired.fastq.… RNA-Seq 1022.5 MB
NT-BGRSDLV03-2_merged_R1_001.filtered.trimmed.paired.fastq.… RNA-Seq 1.2 GB
NT-BGRSDLV03-3dox_S3_L001_R1_001.filtered.trimmed.paired.fa… RNA-Seq 826.2 MB
NT-BGRSDLV03-4dox_merged_R1_001.filtered.trimmed.paired.fas… RNA-Seq 1.1 GB
RNF113A-BGRSDLV03-29_S25_L001_R1_001.filtered.trimmed.paire… RNA-Seq 822.2 MB
RNF113A-BGRSDLV03-30_S26_L001_R1_001.filtered.trimmed.paire… RNA-Seq 665.4 MB
RNF113A-BGRSDLV03-31dox_S27_L001_R1_001.filtered.trimmed.pa… RNA-Seq 727.7 MB
RNF113A-BGRSDLV03-32dox_S28_L001_R1_001.filtered.trimmed.pa… RNA-Seq 679.4 MB
RNF14-BGRSDLV03-33_S29_L001_R1_001.filtered.trimmed.paired.… RNA-Seq 659.9 MB
RNF14-BGRSDLV03-34_merged_R1_001.filtered.trimmed.paired.fa… RNA-Seq 1.2 GB
RNF14-BGRSDLV03-35dox_S31_L001_R1_001.filtered.trimmed.pair… RNA-Seq 719.6 MB
RNF14-BGRSDLV03-36dox_merged_R1_001.filtered.trimmed.paired… RNA-Seq 1.1 GB
SRR30661879_GSM8515481 RNA-Seq 759.0 MB
SRR30661880_GSM8515480 RNA-Seq 674.0 MB
SRR30661881_GSM8515479 RNA-Seq 954.0 MB
SRR30661882_GSM8515478 RNA-Seq 878.0 MB
SRR30661883_GSM8515477 RNA-Seq 1.1 GB
SRR30661884_GSM8515475 RNA-Seq 622.0 MB
SRR30661885_GSM8515474 RNA-Seq 790.0 MB
SRR30661886_GSM8515472 RNA-Seq 659.0 MB
SRR30661887_GSM8515471 RNA-Seq 1.1 GB
SRR30661888_GSM8515470 RNA-Seq 719.0 MB
SRR30661889_GSM8515476 RNA-Seq 647.0 MB
SRR30661890_GSM8515469 RNA-Seq 665.0 MB
SRR30661891_GSM8515468 RNA-Seq 822.0 MB
SRR30661892_GSM8515473 RNA-Seq 1.2 GB
SRR30661893_GSM8515467 RNA-Seq 679.0 MB
SRR30661894_GSM8515465 RNA-Seq 1.2 GB
SRR30661895_GSM8515464 RNA-Seq 1022.0 MB
SRR30661896_GSM8515463 RNA-Seq 1.1 GB
SRR30661897_GSM8515466 RNA-Seq 727.0 MB
SRR30661898_GSM8515462 RNA-Seq 826.0 MB
SRR30661899_GSM8515461 RNA-Seq 623.0 MB
SRR30661900_GSM8515460 RNA-Seq 665.0 MB
SRR30661901_GSM8515459 RNA-Seq 613.0 MB
SRR30661902_GSM8515458 RNA-Seq 684.0 MB
SRR30661903_GSM8515457 RNA-Seq 1.1 GB
SRR30661904_GSM8515456 RNA-Seq 679.0 MB
SRR30661905_GSM8515455 RNA-Seq 1.3 GB
SRR30661906_GSM8515454 RNA-Seq 679.0 MB
SRR30661907_GSM8515453 RNA-Seq 1.1 GB
SRR30661908_GSM8515452 RNA-Seq 787.0 MB
SRR30661909_GSM8515451 RNA-Seq 621.0 MB
SRR30661910_GSM8515450 RNA-Seq 693.0 MB
SRR30661911_GSM8515449 RNA-Seq 647.0 MB
SRR30661912_GSM8515448 RNA-Seq 700.0 MB
SRR30661913_GSM8515447 RNA-Seq 800.0 MB
SRR30661914_GSM8515446 RNA-Seq 709.0 MB
SRR30661915_GSM8515445 RNA-Seq 718.0 MB
SRR30661916_GSM8515444 RNA-Seq 805.0 MB
SRR30661917_GSM8515443 RNA-Seq 788.0 MB
SRR30661918_GSM8515442 RNA-Seq 724.0 MB
WBP4-BGRSDLV03-41_S33_L001_R1_001.filtered.trimmed.paired.f… RNA-Seq 647.8 MB
WBP4-BGRSDLV03-42_merged_R1_001.filtered.trimmed.paired.fas… RNA-Seq 1.1 GB
WBP4-BGRSDLV03-43dox_S35_L001_R1_001.filtered.trimmed.paire… RNA-Seq 790.7 MB
WBP4-BGRSDLV03-44dox_S36_L001_R1_001.filtered.trimmed.paire… RNA-Seq 622.7 MB
ZC3H3-BGRSDLV03-45_S37_L001_R1_001.filtered.trimmed.paired.… RNA-Seq 674.9 MB
ZC3H3-BGRSDLV03-46_S38_L001_R1_001.filtered.trimmed.paired.… RNA-Seq 759.6 MB
ZC3H3-BGRSDLV03-47dox_S39_L001_R1_001.filtered.trimmed.pair… RNA-Seq 878.0 MB
ZC3H3-BGRSDLV03-48dox_merged_R1_001.filtered.trimmed.paired… RNA-Seq 955.0 MB
GSE277047 GSE · via ncbi_elink
GEO ↗

Integrated multi-omics analysis of zinc finger proteins uncovers roles in RNA regulation [RBNS]

synthetic construct

8 data files
FileTypeSize
Input_REP1.fastq.gz OTHER 563.8 MB
Input_REP2.fastq.gz OTHER 985.0 MB
SRR30649072_GSM8513165 OTHER 985.0 MB
SRR30649073_GSM8513164 OTHER 563.0 MB
SRR30649074_GSM8513163 OTHER 670.0 MB
SRR30649075_GSM8513162 OTHER 367.0 MB
ZNF277_REP1.fastq.gz OTHER 367.4 MB
ZNF277_REP2.fastq.gz OTHER 670.6 MB
GSE249246 GSE · via ncbi_elink
GEO ↗

Integrated multi-omics analysis of zinc finger proteins uncovers roles in RNA regulation [eCLIP]

Homo sapiens

268 data files
FileTypeSize
100_to_225_IN1.fastq.gz RIP-Seq 2.1 GB
100_to_225_IN2.fastq.gz RIP-Seq 1.8 GB
125_to_225_IN1.fastq.gz RIP-Seq 1.5 GB
125_to_225_IN2.fastq.gz RIP-Seq 1.3 GB
150_to_225_IN1.fastq.gz RIP-Seq 707.2 MB
150_to_225_IN2.fastq.gz RIP-Seq 707.1 MB
25_to_100_IN1.fastq.gz RIP-Seq 1.9 GB
25_to_100_IN2.fastq.gz RIP-Seq 2.0 GB
50_to_125_IN1.fastq.gz RIP-Seq 1.8 GB
50_to_125_IN2.fastq.gz RIP-Seq 1.8 GB
75_to_150_IN1.fastq.gz RIP-Seq 2.1 GB
75_to_150_IN2.fastq.gz RIP-Seq 1.7 GB
APEX2_IP1_S5_L001_R1_001.fastq.gz RIP-Seq 408.0 MB
APEX2_IP2_S6_L001_R1_001.fastq.gz RIP-Seq 442.8 MB
BRCA1IP1_S38_L002_R1_001.fastq.gz RIP-Seq 879.0 MB
BRCA1IP2_S39_L002_R1_001.fastq.gz RIP-Seq 912.5 MB
CISD1_IP1_S36_L002_R1_001.fastq.gz RIP-Seq 622.6 MB
CISD1_IP2_S37_L002_R1_001.fastq.gz RIP-Seq 628.9 MB
CISD2_IP1_S36_L002_R1_001.fastq.gz RIP-Seq 588.6 MB
CISD2_IP1_S3_L001_R1_001.fastq.gz RIP-Seq 214.2 MB
CISD2_IP2_S37_L002_R1_001.fastq.gz RIP-Seq 524.0 MB
CISD2_IP2_S4_L001_R1_001.fastq.gz RIP-Seq 241.3 MB
CNBP_IP1_S34_L002_R1_001.fastq.gz RIP-Seq 674.9 MB
CNBP_IP1_S7_L001_R1_001.fastq.gz RIP-Seq 299.5 MB
CNBP_IP2_S35_L002_R1_001.fastq.gz RIP-Seq 481.8 MB
CNBP_IP2_S8_L001_R1_001.fastq.gz RIP-Seq 299.8 MB
CNOT4IP1_S40_L002_R1_001.fastq.gz RIP-Seq 615.3 MB
CNOT4IP2_S41_L002_R1_001.fastq.gz RIP-Seq 2.2 GB
CPS4L_IP1_S37_L002_R1_001.fastq.gz RIP-Seq 1.4 GB
CPS4L_IP2_S38_L002_R1_001.fastq.gz RIP-Seq 1.6 GB
CPSF4_IP1_S26_L002_R1_001.fastq.gz RIP-Seq 612.3 MB
CPSF4_IP2_S27_L002_R1_001.fastq.gz RIP-Seq 361.4 MB
CTCF_IP1_S13_L004_R1_001.fastq.gz RIP-Seq 1.4 GB
CTCF_IP2_S14_L004_R1_001.fastq.gz RIP-Seq 668.1 MB
ERI2_IP1_S3_L001_R1_001.fastq.gz RIP-Seq 351.0 MB
ERI2_IP2_S4_L001_R1_001.fastq.gz RIP-Seq 430.5 MB
FUS_IP1_S31_L002_R1_001.fastq.gz RIP-Seq 1.5 GB
FUS_IP2_S32_L002_R1_001.fastq.gz RIP-Seq 1.6 GB
G2E3IP1_S34_L002_R1_001.fastq.gz RIP-Seq 840.5 MB
G2E3IP2_S35_L002_R1_001.fastq.gz RIP-Seq 492.1 MB
GIN1_IP1_S15_L001_R1_001.fastq.gz RIP-Seq 772.0 MB
GIN1_IP2_S16_L001_R1_001.fastq.gz RIP-Seq 879.6 MB
IGHMBP2_IP1_S21_L004_R1_001.fastq.gz RIP-Seq 1.3 GB
IGHMBP2_IP2_S22_L004_R1_001.fastq.gz RIP-Seq 1.6 GB
LN28B_IP1_S28_L002_R1_001.fastq.gz RIP-Seq 600.6 MB
LN28B_IP2_S29_L002_R1_001.fastq.gz RIP-Seq 518.2 MB
MAZ_IP1_S39_L002_R1_001.fastq.gz RIP-Seq 1.3 GB
MAZ_IP2_S40_L002_R1_001.fastq.gz RIP-Seq 1.5 GB
MBNL1_IP1_S19_L004_R1_001.fastq.gz RIP-Seq 1.2 GB
MBNL1_IP2_S20_L004_R1_001.fastq.gz RIP-Seq 1.6 GB
NANO2_IP1_S9_L001_R1_001.fastq.gz RIP-Seq 258.1 MB
NANO2_IP2_S10_L001_R1_001.fastq.gz RIP-Seq 259.6 MB
PHF7_IP1_S39_L004_R1_001.fastq.gz RIP-Seq 1022.8 MB
PHF7_IP2_S40_L004_R1_001.fastq.gz RIP-Seq 920.9 MB
R113A_IP1_S40_L002_R1_001.fastq.gz RIP-Seq 687.9 MB
R113A_IP2_S41_L002_R1_001.fastq.gz RIP-Seq 598.1 MB
RBM5_IP1_S35_L002_R1_001.fastq.gz RIP-Seq 1.6 GB
RBM5_IP2_S36_L002_R1_001.fastq.gz RIP-Seq 1.5 GB
RNF14_IIP1_S11_L001_R1_001.fastq.gz RIP-Seq 823.8 MB
RNF14_IP2_S12_L001_R1_001.fastq.gz RIP-Seq 761.7 MB
SALL4_IP1_S30_L002_R1_001.fastq.gz RIP-Seq 831.8 MB
SALL4_IP2_S31_L002_R1_001.fastq.gz RIP-Seq 574.9 MB
SNRPC_IP1_S44_L002_R1_001.fastq.gz RIP-Seq 687.1 MB
SNRPC_IP2_S45_L002_R1_001.fastq.gz RIP-Seq 774.7 MB
SRR27034020_GSM7932165 RIP-Seq 1.8 GB
SRR27034021_GSM7932164 RIP-Seq 2.0 GB
SRR27034022_GSM7932163 RIP-Seq 1.9 GB
SRR27034023_GSM7932162 RIP-Seq 707.0 MB
SRR27034024_GSM7932161 RIP-Seq 707.0 MB
SRR27034025_GSM7932160 RIP-Seq 1.3 GB
SRR27034026_GSM7932159 RIP-Seq 1.5 GB
SRR27034027_GSM7932158 RIP-Seq 1.8 GB
SRR27034028_GSM7932157 RIP-Seq 2.1 GB
SRR27034029_GSM7932156 RIP-Seq 633.0 MB
SRR27034030_GSM7932155 RIP-Seq 559.0 MB
SRR27034031_GSM7932154 RIP-Seq 808.0 MB
SRR27034032_GSM7932153 RIP-Seq 588.0 MB
SRR27034033_GSM7932152 RIP-Seq 773.0 MB
SRR27034034_GSM7932151 RIP-Seq 625.0 MB
SRR27034035_GSM7932150 RIP-Seq 272.0 MB
SRR27034036_GSM7932149 RIP-Seq 600.0 MB
SRR27034037_GSM7932148 RIP-Seq 1.9 GB
SRR27034038_GSM7932147 RIP-Seq 1.7 GB
SRR27034039_GSM7932146 RIP-Seq 1.9 GB
SRR27034040_GSM7932145 RIP-Seq 1.7 GB
SRR27034041_GSM7932144 RIP-Seq 2.1 GB
SRR27034042_GSM7932143 RIP-Seq 1.8 GB
SRR27034043_GSM7932142 RIP-Seq 631.0 MB
SRR27034044_GSM7932141 RIP-Seq 623.0 MB
SRR27034045_GSM7932140 RIP-Seq 1.4 GB
SRR27034046_GSM7932139 RIP-Seq 1.2 GB
SRR27034047_GSM7932138 RIP-Seq 1.9 GB
SRR27034048_GSM7932109 RIP-Seq 397.0 MB
SRR27034049_GSM7932108 RIP-Seq 353.0 MB
SRR27034050_GSM7932107 RIP-Seq 379.0 MB
SRR27034051_GSM7932106 RIP-Seq 421.0 MB
SRR27034052_GSM7932105 RIP-Seq 390.0 MB
SRR27034053_GSM7932104 RIP-Seq 756.0 MB
SRR27034054_GSM7932103 RIP-Seq 611.0 MB
SRR27034055_GSM7932102 RIP-Seq 1.0 GB
SRR27034056_GSM7932101 RIP-Seq 1.1 GB
SRR27034057_GSM7932100 RIP-Seq 944.0 MB
SRR27034058_GSM7932099 RIP-Seq 887.0 MB
SRR27034059_GSM7932098 RIP-Seq 774.0 MB
SRR27034060_GSM7932097 RIP-Seq 687.0 MB
SRR27034061_GSM7932096 RIP-Seq 574.0 MB
SRR27034062_GSM7932095 RIP-Seq 831.0 MB
SRR27034063_GSM7932094 RIP-Seq 761.0 MB
SRR27034064_GSM7932093 RIP-Seq 823.0 MB
SRR27034065_GSM7932092 RIP-Seq 1.5 GB
SRR27034066_GSM7932091 RIP-Seq 1.6 GB
SRR27034067_GSM7932090 RIP-Seq 598.0 MB
SRR27034068_GSM7932089 RIP-Seq 687.0 MB
SRR27034069_GSM7932088 RIP-Seq 920.0 MB
SRR27034070_GSM7932087 RIP-Seq 1022.0 MB
SRR27034071_GSM7932086 RIP-Seq 259.0 MB
SRR27034072_GSM7932085 RIP-Seq 258.0 MB
SRR27034073_GSM7932084 RIP-Seq 1.6 GB
SRR27034074_GSM7932083 RIP-Seq 1.2 GB
SRR27034075_GSM7932168 RIP-Seq 1.7 GB
SRR27034076_GSM7932082 RIP-Seq 1.5 GB
SRR27034077_GSM7932167 RIP-Seq 2.1 GB
SRR27034078_GSM7932166 RIP-Seq 1.8 GB
SRR27034079_GSM7932081 RIP-Seq 1.3 GB
SRR27034080_GSM7932080 RIP-Seq 518.0 MB
SRR27034081_GSM7932079 RIP-Seq 600.0 MB
SRR27034082_GSM7932078 RIP-Seq 1.6 GB
SRR27034083_GSM7932077 RIP-Seq 1.3 GB
SRR27034084_GSM7932076 RIP-Seq 879.0 MB
SRR27034085_GSM7932075 RIP-Seq 771.0 MB
SRR27034086_GSM7932074 RIP-Seq 492.0 MB
SRR27034087_GSM7932073 RIP-Seq 840.0 MB
SRR27034088_GSM7932072 RIP-Seq 1.6 GB
SRR27034089_GSM7932071 RIP-Seq 1.5 GB
SRR27034090_GSM7932070 RIP-Seq 430.0 MB
SRR27034091_GSM7932069 RIP-Seq 351.0 MB
SRR27034092_GSM7932068 RIP-Seq 668.0 MB
SRR27034093_GSM7932067 RIP-Seq 1.4 GB
SRR27034094_GSM7932066 RIP-Seq 361.0 MB
SRR27034095_GSM7932065 RIP-Seq 612.0 MB
SRR27034096_GSM7932064 RIP-Seq 1.6 GB
SRR27034097_GSM7932063 RIP-Seq 1.4 GB
SRR27034098_GSM7932062 RIP-Seq 2.2 GB
SRR27034099_GSM7932061 RIP-Seq 615.0 MB
SRR27034100_GSM7932060 RIP-Seq 481.0 MB
SRR27034101_GSM7932059 RIP-Seq 674.0 MB
SRR27034102_GSM7932058 RIP-Seq 523.0 MB
SRR27034103_GSM7932057 RIP-Seq 588.0 MB
SRR27034104_GSM7932056 RIP-Seq 628.0 MB
SRR27034105_GSM7932055 RIP-Seq 622.0 MB
SRR27034106_GSM7932054 RIP-Seq 912.0 MB
SRR27034107_GSM7932137 RIP-Seq 1.8 GB
SRR27034108_GSM7932136 RIP-Seq 897.0 MB
SRR27034109_GSM7932135 RIP-Seq 667.0 MB
SRR27034110_GSM7932134 RIP-Seq 561.0 MB
SRR27034111_GSM7932133 RIP-Seq 871.0 MB
SRR27034112_GSM7932132 RIP-Seq 1015.0 MB
SRR27034113_GSM7932131 RIP-Seq 836.0 MB
SRR27034114_GSM7932130 RIP-Seq 784.0 MB
SRR27034115_GSM7932129 RIP-Seq 792.0 MB
SRR27034116_GSM7932128 RIP-Seq 771.0 MB
SRR27034117_GSM7932127 RIP-Seq 705.0 MB
SRR27034118_GSM7932126 RIP-Seq 877.0 MB
SRR27034119_GSM7932125 RIP-Seq 1002.0 MB
SRR27034120_GSM7932124 RIP-Seq 992.0 MB
SRR27034121_GSM7932123 RIP-Seq 669.0 MB
SRR27034122_GSM7932122 RIP-Seq 804.0 MB
SRR27034123_GSM7932121 RIP-Seq 618.0 MB
SRR27034124_GSM7932120 RIP-Seq 1.7 GB
SRR27034125_GSM7932119 RIP-Seq 633.0 MB
SRR27034126_GSM7932118 RIP-Seq 694.0 MB
SRR27034127_GSM7932117 RIP-Seq 1001.0 MB
SRR27034128_GSM7932116 RIP-Seq 404.0 MB
SRR27034129_GSM7932115 RIP-Seq 530.0 MB
SRR27034130_GSM7932114 RIP-Seq 1.8 GB
SRR27034131_GSM7932113 RIP-Seq 1.1 GB
SRR27034132_GSM7932112 RIP-Seq 458.0 MB
SRR27034133_GSM7932111 RIP-Seq 977.0 MB
SRR27034134_GSM7932110 RIP-Seq 532.0 MB
SRR27034135_GSM7932053 RIP-Seq 879.0 MB
SRR27034136_GSM7932052 RIP-Seq 442.0 MB
SRR27034137_GSM7932051 RIP-Seq 407.0 MB
SRR29262313_GSM8302076 RIP-Seq 241.0 MB
SRR29262314_GSM8302075 RIP-Seq 214.0 MB
SRR29262315_GSM8302074 RIP-Seq 299.0 MB
SRR29262316_GSM8302073 RIP-Seq 299.0 MB
SRR29262317_GSM8302072 RIP-Seq 283.0 MB
SRR29262318_GSM8302071 RIP-Seq 195.0 MB
SRR29262319_GSM8302070 RIP-Seq 153.0 MB
SRR29262320_GSM8302069 RIP-Seq 220.0 MB
SRR29262321_GSM8302068 RIP-Seq 1.1 GB
SRR29262322_GSM8302067 RIP-Seq 1.2 GB
SRR29262323_GSM8302066 RIP-Seq 1.3 GB
SRR29262324_GSM8302065 RIP-Seq 1.9 GB
SRR29262325_GSM8302064 RIP-Seq 1.1 GB
SRR29262326_GSM8302063 RIP-Seq 1.2 GB
SRR29262327_GSM8302062 RIP-Seq 1.4 GB
SRR29262328_GSM8302061 RIP-Seq 1.6 GB
TEX13A_IP1_S35_L004_R1_001.fastq.gz RIP-Seq 887.5 MB
TEX13A_IP2_S36_L004_R1_001.fastq.gz RIP-Seq 944.0 MB
TF3C4_IP1_S17_L004_R1_001.fastq.gz RIP-Seq 1.1 GB
TF3C4_IP2_S18_L004_R1_001.fastq.gz RIP-Seq 1.0 GB
TRIM55IP1_S42_L002_R1_001.fastq.gz RIP-Seq 611.2 MB
TRIM55IP2_S43_L002_R1_001.fastq.gz RIP-Seq 756.0 MB
U2AF1_IP1_S34_L004_R1_001.fastq.gz RIP-Seq 390.2 MB
U2AF1_IP2_S36_L004_R1_001.fastq.gz RIP-Seq 421.3 MB
V5_100_to_225_IP1.fastq.gz RIP-Seq 1.8 GB
V5_100_to_225_IP2.fastq.gz RIP-Seq 1.9 GB
V5_125_to_225_IP1.fastq.gz RIP-Seq 1.2 GB
V5_125_to_225_IP2.fastq.gz RIP-Seq 1.4 GB
V5_150_to_225_IP1.fastq.gz RIP-Seq 623.0 MB
V5_150_to_225_IP2.fastq.gz RIP-Seq 631.9 MB
V5_25_to_100_IP1.fastq.gz RIP-Seq 1.8 GB
V5_25_to_100_IP2.fastq.gz RIP-Seq 2.1 GB
V5_50_to_125_IP1.fastq.gz RIP-Seq 1.7 GB
V5_50_to_125_IP2.fastq.gz RIP-Seq 1.9 GB
V5_75_to_150_IP1.fastq.gz RIP-Seq 1.7 GB
V5_75_to_150_IP2.fastq.gz RIP-Seq 1.9 GB
WBP4_IP1_S7_L001_R1_001.fastq.gz RIP-Seq 379.9 MB
WBP4_IP2_S8_L001_R1_001.fastq.gz RIP-Seq 353.4 MB
ZC3H3_IP1_S1_L001_R1_001.fastq.gz RIP-Seq 397.8 MB
ZC3H3_IP2_S2_L001_R1_001.fastq.gz RIP-Seq 532.5 MB
ZC3HAV1_IP1_S23_L004_R1_001.fastq.gz RIP-Seq 977.3 MB
ZC3HAV1_IP2_S24_L004_R1_001.fastq.gz RIP-Seq 458.3 MB
ZFP36L1-IP1_S28_R1_001.fastq.gz RIP-Seq 1.1 GB
ZFP36L1-IP2_S29_R1_001.fastq.gz RIP-Seq 1.8 GB
ZMAT3_IP1_S11_L001_R1_001.fastq.gz RIP-Seq 530.2 MB
ZMAT3_IP2_S12_L001_R1_001.fastq.gz RIP-Seq 404.2 MB
ZMAT5_IP1_S25_L004_R1_001.fastq.gz RIP-Seq 1001.5 MB
ZMAT5_IP2_S26_L004_R1_001.fastq.gz RIP-Seq 694.7 MB
ZNF22_IP1_S48_L002_R1_001.fastq.gz RIP-Seq 618.2 MB
ZNF22_IP2_S49_L002_R1_001.fastq.gz RIP-Seq 804.7 MB
ZNF277_IP1_S1_L001_R1_001.fastq.gz RIP-Seq 220.3 MB
ZNF277_IP1_S27_L004_R1_001.fastq.gz RIP-Seq 669.4 MB
ZNF277_IP2_S28_L004_R1_001.fastq.gz RIP-Seq 992.7 MB
ZNF277_IP2_S2_L001_R1_001.fastq.gz RIP-Seq 153.2 MB
ZNF277_N_IN1_S48_L006_R1_001.fastq.gz RIP-Seq 1.2 GB
ZNF277_N_IN2_S50_L006_R1_001.fastq.gz RIP-Seq 1.1 GB
ZNF277_N_IP1_S49_L006_R1_001.fastq.gz RIP-Seq 1.9 GB
ZNF277_N_IP2_S51_L006_R1_001.fastq.gz RIP-Seq 1.3 GB
ZNF2_IP1_S33_L002_R1_001.fastq.gz RIP-Seq 633.5 MB
ZNF2_IP2_S34_L002_R1_001.fastq.gz RIP-Seq 1.7 GB
ZNF317_IP1_S29_L004_R1_001.fastq.gz RIP-Seq 1002.3 MB
ZNF317_IP2_S30_L004_R1_001.fastq.gz RIP-Seq 878.0 MB
ZNF473-DEL-IN1_S25_R1_001.fastq.gz RIP-Seq 600.5 MB
ZNF473-DEL-IN2_S27_R1_001.fastq.gz RIP-Seq 272.1 MB
ZNF473-DEL-IP1_S26_R1_001.fastq.gz RIP-Seq 625.3 MB
ZNF473-DEL-IP2_S28_R1_001.fastq.gz RIP-Seq 773.5 MB
ZNF473IP1_S36_L002_R1_001.fastq.gz RIP-Seq 706.0 MB
ZNF473IP2_S37_L002_R1_001.fastq.gz RIP-Seq 771.2 MB
ZNF473_N_IN1_S52_L006_R1_001.fastq.gz RIP-Seq 1.2 GB
ZNF473_N_IN2_S54_L006_R1_001.fastq.gz RIP-Seq 1.1 GB
ZNF473_N_IP1_S53_L006_R1_001.fastq.gz RIP-Seq 1.6 GB
ZNF473_N_IP2_S55_L006_R1_001.fastq.gz RIP-Seq 1.4 GB
ZNF473-WT-IN1_S21_R1_001.fastq.gz RIP-Seq 588.4 MB
ZNF473-WT-IN2_S23_R1_001.fastq.gz RIP-Seq 808.5 MB
ZNF473-WT-IP1_S22_R1_001.fastq.gz RIP-Seq 559.0 MB
ZNF473-WT-IP2_S24_R1_001.fastq.gz RIP-Seq 633.8 MB
ZNF574_IP1_S3_L001_R1_001.fastq.gz RIP-Seq 792.5 MB
ZNF574_IP2_S4_L001_R1_001.fastq.gz RIP-Seq 784.5 MB
ZNF593_IP1_S52_L002_R1_001.fastq.gz RIP-Seq 836.3 MB
ZNF593_IP1_S5_L001_R1_001.fastq.gz RIP-Seq 195.9 MB
ZNF593_IP2_S53_L002_R1_001.fastq.gz RIP-Seq 1015.7 MB
ZNF593_IP2_S6_L001_R1_001.fastq.gz RIP-Seq 283.8 MB
ZNF706_IP1_S31_L004_R1_001.fastq.gz RIP-Seq 871.1 MB
ZNF706_IP2_S32_L004_R1_001.fastq.gz RIP-Seq 561.5 MB
ZNF800_IP1_S15_L004_R1_001.fastq.gz RIP-Seq 667.8 MB
ZNF800_IP2_S16_L004_R1_001.fastq.gz RIP-Seq 897.5 MB
GSE268963 GSE · via ncbi_elink
GEO ↗

Integrated multi-omics analysis of zinc finger proteins uncovers roles in RNA regulation [SLAM-Seq]

Homo sapiens

241 data files
FileTypeSize
BRCA1_0hr_1_R1.fastq.gz OTHER 1.0 GB
BRCA1_0hr_2_R1.fastq.gz OTHER 1.2 GB
BRCA1_0hr_3_R1.fastq.gz OTHER 1.2 GB
BRCA1_2hr_1_R1.fastq.gz OTHER 804.9 MB
BRCA1_2hr_2_R1.fastq.gz OTHER 804.3 MB
BRCA1_2hr_3_R1.fastq.gz OTHER 942.0 MB
BRCA1_4hr_1_R1.fastq.gz OTHER 559.3 MB
BRCA1_4hr_2_R1.fastq.gz OTHER 714.3 MB
BRCA1_4hr_3_R1.fastq.gz OTHER 648.3 MB
BRCA1_8hr_1_R1.fastq.gz OTHER 884.8 MB
BRCA1_8hr_2_R1.fastq.gz OTHER 743.8 MB
BRCA1_8hr_3_R1.fastq.gz OTHER 451.6 MB
CNOT4_0hr_1_S4_L001_R1_001.fastq.gz OTHER 1007.3 MB
CNOT4_0hr_2_S5_L001_R1_001.fastq.gz OTHER 1.2 GB
CNOT4_0hr_3_S6_L001_R1_001.fastq.gz OTHER 1.5 GB
CNOT4_2hr_1_S10_L001_R1_001.fastq.gz OTHER 326.9 MB
CNOT4_2hr_2_S11_L001_R1_001.fastq.gz OTHER 701.0 MB
CNOT4_2hr_3_S12_L001_R1_001.fastq.gz OTHER 566.3 MB
CNOT4_4hr_1_S16_L001_R1_001.fastq.gz OTHER 719.2 MB
CNOT4_4hr_2_S17_L001_R1_001.fastq.gz OTHER 769.8 MB
CNOT4_4hr_3_S18_L001_R1_001.fastq.gz OTHER 875.1 MB
CNOT4_8hr_1_S22_L001_R1_001.fastq.gz OTHER 1.6 GB
CNOT4_8hr_2_S23_L001_R1_001.fastq.gz OTHER 1023.7 MB
CNOT4_8hr_3_S24_L001_R1_001.fastq.gz OTHER 1.0 GB
MAZ_0hr_1_R1.fastq.gz OTHER 2.1 GB
MAZ_0hr_2_R1.fastq.gz OTHER 1.6 GB
MAZ_0hr_3_R1.fastq.gz OTHER 1.7 GB
MAZ_2hr_1_R1.fastq.gz OTHER 1.8 GB
MAZ_2hr_2_R1.fastq.gz OTHER 1.4 GB
MAZ_2hr_3_R1.fastq.gz OTHER 1.5 GB
MAZ_4hr_1_R1.fastq.gz OTHER 2.2 GB
MAZ_4hr_2_R1.fastq.gz OTHER 1.8 GB
MAZ_4hr_3_R1.fastq.gz OTHER 2.6 GB
MAZ_8hr_1_R1.fastq.gz OTHER 1.1 GB
MAZ_8hr_2_R1.fastq.gz OTHER 1.8 GB
MAZ_8hr_3_R1.fastq.gz OTHER 1.8 GB
NT_0hr_1_R1.fastq.gz OTHER 1.2 GB
NT_0hr_2_R1.fastq.gz OTHER 1.2 GB
NT_0hr_3_R1.fastq.gz OTHER 1.3 GB
NT_2hr_1_R1.fastq.gz OTHER 1.0 GB
NT_2hr_2_R1.fastq.gz OTHER 1019.2 MB
NT_2hr_3_R1.fastq.gz OTHER 947.5 MB
NT_4hr_1_R1.fastq.gz OTHER 1002.1 MB
NT_4hr_2_R1.fastq.gz OTHER 938.2 MB
NT_4hr_3_R1.fastq.gz OTHER 935.3 MB
NT_8hr_1_R1.fastq.gz OTHER 894.3 MB
NT_8hr_2_R1.fastq.gz OTHER 807.7 MB
NT_8hr_3_R1.fastq.gz OTHER 1.2 GB
PHF7_0hr_1_R1.fastq.gz OTHER 2.5 GB
PHF7_0hr_2_R1.fastq.gz OTHER 2.6 GB
PHF7_0hr_3_R1.fastq.gz OTHER 2.6 GB
PHF7_2hr_1_R1.fastq.gz OTHER 1.8 GB
PHF7_2hr_2_R1.fastq.gz OTHER 1.9 GB
PHF7_2hr_3_R1.fastq.gz OTHER 1.3 GB
PHF7_4hr_1_R1.fastq.gz OTHER 1.4 GB
PHF7_4hr_2_R1.fastq.gz OTHER 2.2 GB
PHF7_4hr_3_R1.fastq.gz OTHER 2.1 GB
PHF7_8hr_1_R1.fastq.gz OTHER 1.5 GB
PHF7_8hr_2_R1.fastq.gz OTHER 1.4 GB
PHF7_8hr_3_R1.fastq.gz OTHER 5.0 MB
SRR29266987_GSM8303743 OTHER 2.0 GB
SRR29266988_GSM8303742 OTHER 1.8 GB
SRR29266989_GSM8303741 OTHER 2.0 GB
SRR29266990_GSM8303740 OTHER 761.0 MB
SRR29266991_GSM8303739 OTHER 1.6 GB
SRR29266992_GSM8303738 OTHER 2.1 GB
SRR29266993_GSM8303737 OTHER 1.5 GB
SRR29266994_GSM8303736 OTHER 2.4 GB
SRR29266995_GSM8303735 OTHER 1.7 GB
SRR29266996_GSM8303734 OTHER 2.0 GB
SRR29266997_GSM8303733 OTHER 2.5 GB
SRR29266998_GSM8303732 OTHER 2.2 GB
SRR29266998.lite OTHER 2.2 GB
SRR29266999_GSM8303731 OTHER 887.0 MB
SRR29267000_GSM8303730 OTHER 1.6 GB
SRR29267001_GSM8303729 OTHER 1.8 GB
SRR29267002_GSM8303728 OTHER 2.3 GB
SRR29267003_GSM8303727 OTHER 2.0 GB
SRR29267004_GSM8303726 OTHER 2.0 GB
SRR29267005_GSM8303725 OTHER 1.6 GB
SRR29267006_GSM8303724 OTHER 2.6 GB
SRR29267007_GSM8303723 OTHER 1.8 GB
SRR29267008_GSM8303698 OTHER 2.5 GB
SRR29267009_GSM8303697 OTHER 1.5 GB
SRR29267010_GSM8303696 OTHER 1.9 GB
SRR29267011_GSM8303695 OTHER 1.7 GB
SRR29267012_GSM8303694 OTHER 1.3 GB
SRR29267013_GSM8303693 OTHER 1.0 GB
SRR29267014_GSM8303692 OTHER 1.1 GB
SRR29267015_GSM8303691 OTHER 1.1 GB
SRR29267016_GSM8303690 OTHER 619.0 MB
SRR29267017_GSM8303689 OTHER 536.0 MB
SRR29267018_GSM8303688 OTHER 822.0 MB
SRR29267019_GSM8303687 OTHER 959.0 MB
SRR29267020_GSM8303686 OTHER 882.0 MB
SRR29267021_GSM8303685 OTHER 622.0 MB
SRR29267022_GSM8303684 OTHER 753.0 MB
SRR29267023_GSM8303683 OTHER 5.0 MB
SRR29267024_GSM8303682 OTHER 1.4 GB
SRR29267025_GSM8303681 OTHER 1.5 GB
SRR29267026_GSM8303680 OTHER 2.1 GB
SRR29267027_GSM8303679 OTHER 2.2 GB
SRR29267028_GSM8303678 OTHER 1.4 GB
SRR29267029_GSM8303677 OTHER 1.3 GB
SRR29267030_GSM8303676 OTHER 1.9 GB
SRR29267031_GSM8303675 OTHER 1.8 GB
SRR29267032_GSM8303722 OTHER 1.8 GB
SRR29267033_GSM8303721 OTHER 1.5 GB
SRR29267034_GSM8303720 OTHER 1.4 GB
SRR29267035_GSM8303719 OTHER 1.8 GB
SRR29267036_GSM8303718 OTHER 1.5 GB
SRR29267037_GSM8303717 OTHER 1.7 GB
SRR29267038_GSM8303716 OTHER 1.3 GB
SRR29267039_GSM8303715 OTHER 1.4 GB
SRR29267040_GSM8303714 OTHER 1.4 GB
SRR29267041_GSM8303713 OTHER 1.5 GB
SRR29267042_GSM8303712 OTHER 1.7 GB
SRR29267043_GSM8303711 OTHER 1.3 GB
SRR29267044_GSM8303710 OTHER 1.7 GB
SRR29267045_GSM8303709 OTHER 1.6 GB
SRR29267046_GSM8303708 OTHER 1.5 GB
SRR29267047_GSM8303707 OTHER 1.3 GB
SRR29267048_GSM8303706 OTHER 1.9 GB
SRR29267049_GSM8303705 OTHER 1.4 GB
SRR29267050_GSM8303704 OTHER 1.7 GB
SRR29267051_GSM8303703 OTHER 1.9 GB
SRR29267052_GSM8303702 OTHER 1.2 GB
SRR29267053_GSM8303701 OTHER 1.7 GB
SRR29267054_GSM8303700 OTHER 1.6 GB
SRR29267055_GSM8303699 OTHER 1.5 GB
SRR29267056_GSM8303674 OTHER 2.6 GB
SRR29267057_GSM8303673 OTHER 2.6 GB
SRR29267058_GSM8303672 OTHER 2.5 GB
SRR29267059_GSM8303671 OTHER 1.2 GB
SRR29267060_GSM8303670 OTHER 807.0 MB
SRR29267061_GSM8303669 OTHER 894.0 MB
SRR29267062_GSM8303668 OTHER 935.0 MB
SRR29267063_GSM8303667 OTHER 938.0 MB
SRR29267064_GSM8303666 OTHER 1002.0 MB
SRR29267065_GSM8303665 OTHER 947.0 MB
SRR29267066_GSM8303664 OTHER 1019.0 MB
SRR29267067_GSM8303663 OTHER 1.0 GB
SRR29267068_GSM8303662 OTHER 1.3 GB
SRR29267069_GSM8303661 OTHER 1.2 GB
SRR29267070_GSM8303660 OTHER 1.2 GB
SRR29267071_GSM8303659 OTHER 1.8 GB
SRR29267072_GSM8303658 OTHER 1.8 GB
SRR29267073_GSM8303657 OTHER 1.1 GB
SRR29267074_GSM8303656 OTHER 2.6 GB
SRR29267075_GSM8303655 OTHER 1.8 GB
SRR29267076_GSM8303654 OTHER 2.2 GB
SRR29267077_GSM8303653 OTHER 1.5 GB
SRR29267078_GSM8303652 OTHER 1.4 GB
SRR29267079_GSM8303651 OTHER 1.8 GB
SRR29267080_GSM8303650 OTHER 1.7 GB
SRR29267081_GSM8303649 OTHER 1.6 GB
SRR29267082_GSM8303648 OTHER 2.1 GB
SRR29267083_GSM8303647 OTHER 1.0 GB
SRR29267084_GSM8303646 OTHER 1023.0 MB
SRR29267085_GSM8303645 OTHER 1.6 GB
SRR29267086_GSM8303644 OTHER 875.0 MB
SRR29267087_GSM8303643 OTHER 769.0 MB
SRR29267088_GSM8303642 OTHER 719.0 MB
SRR29267089_GSM8303641 OTHER 566.0 MB
SRR29267090_GSM8303640 OTHER 700.0 MB
SRR29267091_GSM8303639 OTHER 326.0 MB
SRR29267092_GSM8303638 OTHER 1.5 GB
SRR29267093_GSM8303637 OTHER 1.2 GB
SRR29267094_GSM8303636 OTHER 1007.0 MB
SRR29267095_GSM8303635 OTHER 451.0 MB
SRR29267096_GSM8303634 OTHER 743.0 MB
SRR29267097_GSM8303633 OTHER 884.0 MB
SRR29267098_GSM8303632 OTHER 648.0 MB
SRR29267099_GSM8303631 OTHER 714.0 MB
SRR29267100_GSM8303630 OTHER 559.0 MB
SRR29267101_GSM8303629 OTHER 942.0 MB
SRR29267102_GSM8303628 OTHER 804.0 MB
SRR29267103_GSM8303627 OTHER 804.0 MB
SRR29267104_GSM8303626 OTHER 1.2 GB
SRR29267105_GSM8303625 OTHER 1.2 GB
SRR29267106_GSM8303624 OTHER 1.0 GB
ZFP36L1_0hr_1_S1_L001_R1_001.fastq.gz OTHER 753.7 MB
ZFP36L1_0hr_2_S2_L001_R1_001.fastq.gz OTHER 622.8 MB
ZFP36L1_0hr_3_S3_L001_R1_001.fastq.gz OTHER 882.4 MB
ZFP36L1_2hr_1_S7_L001_R1_001.fastq.gz OTHER 959.9 MB
ZFP36L1_2hr_2_S8_L001_R1_001.fastq.gz OTHER 822.1 MB
ZFP36L1_2hr_3_S9_L001_R1_001.fastq.gz OTHER 536.4 MB
ZFP36L1_4hr_1_S13_L001_R1_001.fastq.gz OTHER 619.8 MB
ZFP36L1_4hr_2_S14_L001_R1_001.fastq.gz OTHER 1.1 GB
ZFP36L1_4hr_3_S15_L001_R1_001.fastq.gz OTHER 1.1 GB
ZFP36L1_8hr_1_S19_L001_R1_001.fastq.gz OTHER 1.0 GB
ZFP36L1_8hr_2_S20_L001_R1_001.fastq.gz OTHER 1.3 GB
ZFP36L1_8hr_3_S21_L001_R1_001.fastq.gz OTHER 1.7 GB
ZMAT3_0hr_1_R1.fastq.gz OTHER 1.9 GB
ZMAT3_0hr_2_R1.fastq.gz OTHER 1.5 GB
ZMAT3_0hr_3_R1.fastq.gz OTHER 2.5 GB
ZMAT3_2hr_1_R1.fastq.gz OTHER 1.5 GB
ZMAT3_2hr_2_R1.fastq.gz OTHER 1.6 GB
ZMAT3_2hr_3_R1.fastq.gz OTHER 1.7 GB
ZMAT3_4hr_1_R1.fastq.gz OTHER 1.2 GB
ZMAT3_4hr_2_R1.fastq.gz OTHER 1.9 GB
ZMAT3_4hr_3_R1.fastq.gz OTHER 1.7 GB
ZMAT3_8hr_1_R1.fastq.gz OTHER 1.4 GB
ZMAT3_8hr_2_R1.fastq.gz OTHER 1.9 GB
ZMAT3_8hr_3_R1.fastq.gz OTHER 1.3 GB
ZMAT5_0hr_1_R1.fastq.gz OTHER 1.5 GB
ZMAT5_0hr_2_R1.fastq.gz OTHER 1.6 GB
ZMAT5_0hr_3_R1.fastq.gz OTHER 1.7 GB
ZMAT5_2hr_1_R1.fastq.gz OTHER 1.3 GB
ZMAT5_2hr_2_R1.fastq.gz OTHER 1.7 GB
ZMAT5_2hr_3_R1.fastq.gz OTHER 1.5 GB
ZMAT5_4hr_1_R1.fastq.gz OTHER 1.4 GB
ZMAT5_4hr_2_R1.fastq.gz OTHER 1.4 GB
ZMAT5_4hr_3_R1.fastq.gz OTHER 1.3 GB
ZMAT5_8hr_1_R1.fastq.gz OTHER 1.7 GB
ZMAT5_8hr_2_R1.fastq.gz OTHER 1.5 GB
ZMAT5_8hr_3_R1.fastq.gz OTHER 1.8 GB
ZNF277_0hr_1_R1.fastq.gz OTHER 1.4 GB
ZNF277_0hr_2_R1.fastq.gz OTHER 1.5 GB
ZNF277_0hr_3_R1.fastq.gz OTHER 1.8 GB
ZNF277_2hr_1_R1.fastq.gz OTHER 1.8 GB
ZNF277_2hr_2_R1.fastq.gz OTHER 2.6 GB
ZNF277_2hr_3_R1.fastq.gz OTHER 1.6 GB
ZNF277_4hr_1_R1.fastq.gz OTHER 2.0 GB
ZNF277_4hr_2_R1.fastq.gz OTHER 2.0 GB
ZNF277_4hr_3_R1.fastq.gz OTHER 2.3 GB
ZNF277_8hr_1_R1.fastq.gz OTHER 1.8 GB
ZNF277_8hr_2_R1.fastq.gz OTHER 1.6 GB
ZNF277_8hr_3_R1.fastq.gz OTHER 887.9 MB
ZNF706_0hr_1_R1.fastq.gz OTHER 2.2 GB
ZNF706_0hr_2_R1.fastq.gz OTHER 2.5 GB
ZNF706_0hr_3_R1.fastq.gz OTHER 2.0 GB
ZNF706_2hr_1_R1.fastq.gz OTHER 1.7 GB
ZNF706_2hr_2_R1.fastq.gz OTHER 2.4 GB
ZNF706_2hr_3_R1.fastq.gz OTHER 1.5 GB
ZNF706_4hr_1_R1.fastq.gz OTHER 2.1 GB
ZNF706_4hr_2_R1.fastq.gz OTHER 1.6 GB
ZNF706_4hr_3_R1.fastq.gz OTHER 761.7 MB
ZNF706_8hr_1_R1.fastq.gz OTHER 2.0 GB
ZNF706_8hr_2_R1.fastq.gz OTHER 1.8 GB
ZNF706_8hr_3_R1.fastq.gz OTHER 2.0 GB

Potentially related datasets 2

These accessions were text-mined from the PMC full text. They may be referenced for comparison, cited from other studies, or otherwise mentioned without being primary data for this paper.

Accession Source Title
MSV000094794 MASSIVE · MassIVE No title in the index
GSE249247 GSE · GEO GEO ↗ Integrated multi-omics analysis of zinc finger proteins uncovers roles in RNA regulation.

Analysis pipelines 7

Pipeline Assay Steps Dataset
GSE249245 ChIP-seq Data Processing geo_data_processing ChIP-seq 5 GSE249245
GSE249246 eCLIP Data Processing geo_data_processing eCLIP 3 GSE249246
GSE249247 ChIP-seq Data Processing geo_data_processing ChIP-seq 5 GSE249247
GSE268963 Data Processing geo_data_processing — 1 GSE268963
GSE277047 Data Processing geo_data_processing — 2 GSE277047
GSE277160 RNA-seq Data Processing geo_data_processing RNA-seq 8 GSE277160
GSE277161 RNA-seq Data Processing geo_data_processing RNA-seq 4 GSE277161
Funding 14 grants
Grant Funder
U24 HG009889 NHGRI NIH HHS (United States)
S10 OD026929 NIH HHS (United States)
R01 HG004659 NHGRI NIH HHS (United States)
U54 CA209891 NCI NIH HHS (United States)
U24 HG011735 NHGRI NIH HHS (United States)
RF1 MH126719 NIMH NIH HHS (United States)
R01 HG011864 NHGRI NIH HHS (United States)
T32 CA067754 NCI NIH HHS (United States)
U41 HG009889 NHGRI NIH HHS (United States)
S10 OD025052 NIH HHS (United States)
R01 HG012216 NHGRI NIH HHS (United States)
R01 AG071869 NIA NIH HHS (United States)
P41 GM103504 NIGMS NIH HHS (United States)
R35 GM142864 NIGMS NIH HHS (United States)