GSE74250
GSE GEOTranscriptome analysis of diverse cell types infected with human cytomegalovirus
Organism:
Homo sapiens
Platform:
GPL11154
Samples:
40
Experiment Types:
Expression profiling by array
Expression profiling by high throughput sequencing
Other
Submitted:
Oct 21 2015
Last Updated:
May 15 2019
Status:
Public on Sep 17 2016
Contact:
Gene,,Yeo (UCSD)
Relations
SuperSeries of: GSE73843
SuperSeries of: GSE73853
SuperSeries of: GSE86791
BioProject: https://www.ncbi.nlm.nih.gov/bioproject/PRJNA299581
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall Design
Refer to individual Series
Analysis (4 steps)
View Data Processing
Processing steps for GSE74250
- Data processed using Affymetrix package (Affy Power Tools) apt-probeset-summarize.
- Iter-plier algorithm used to quantify probesets.
- As previously described (Huelga et al., 2012).
- HJAY_r2.pgf
Supplementary Files (1)
GSE74250_RAW.tar
Download
GEO Samples (40)
GSM1904393
GSM1904394
GSM1904395
GSM1904396
GSM1904397
GSM1904398
GSM1904399
GSM1904400
GSM1904401
GSM1904402
GSM1904403
GSM1904404
GSM1904405
GSM1904406
GSM1904407
GSM1904408
GSM1904409
GSM1904410
GSM1904488
GSM1904489
GSM1904490
GSM1904491
GSM1904492
GSM1904493
GSM1904494
GSM1904495
GSM1904496
GSM1904497
GSM1904498
GSM2306702
GSM2306703
GSM2308766
GSM2308767
GSM2308768
GSM2308769
GSM2308770
GSM2308771
GSM2308772
GSM2308773
GSM2308774
Dataset Citations (1)
RNA-binding protein CPEB1 remodels host and viral RNA landscapes.
PMID 27775709
· 2016
· Nature structural & molecular biology
Ranjan Batra, Thomas J Stark, Alex E. Clark, Jean-Philippe Belzile, Emily C Wheeler, Brian A Yee, Hui Huang, Chelsea Gelboin-Burkhart, Stephanie C Huelga, Stefan Aigner, Brett T Roberts, Tomas J Bos, Shashank Sathe, John Paul Donohue, Frank Rigo, Manuel Ares, Deborah H Spector, Gene W Yeo
Linked Publications (1)
RNA-binding protein CPEB1 remodels host and viral RNA landscapes.
Nature structural & molecular biology · 2016