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GSE17538

GSE GEO
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Experimentally Derived Metastasis Gene Expression Profile Predicts Recurrence and Death in Colon Cancer Patients

Organism: Mus musculus
Platform: GPL570
Samples: 244
Experiment Types:
Expression profiling by array
Submitted: Aug 06 2009
Last Updated: Aug 03 2020
Status: Public on Nov 14 2009
Contact: Pengcheng,,Lu (Vanderbilt University)

Relations

SuperSeries of: GSE17537 SuperSeries of: GSE19072 SuperSeries of: GSE19073 SuperSeries of: GSE17536 BioProject: https://www.ncbi.nlm.nih.gov/bioproject/PRJNA118645

Summary

This SuperSeries is composed of the SubSeries listed below.

Overall Design

Refer to individual Series

Analysis (3 steps)

View Data Processing
Processing steps for GSE17538
  1. Bioconductor's affy package was used for RMA normalization and raw data processing using default settings for background correction and normalization.
  2. Cox regression hazards model was applied to the processed data using the survival package.
  3. All analyses were performed using R software.

Supplementary Files (1)

GSE17538_RAW.tar Download
GEO Samples (244)
GSM437093 GSM437094 GSM437095 GSM437096 GSM437097 GSM437098 GSM437099 GSM437100 GSM437101 GSM437102 GSM437103 GSM437104 GSM437105 GSM437106 GSM437107 GSM437108 GSM437109 GSM437110 GSM437111 GSM437112 GSM437113 GSM437114 GSM437115 GSM437116 GSM437117 GSM437118 GSM437119 GSM437120 GSM437121 GSM437122 GSM437123 GSM437124 GSM437125 GSM437126 GSM437127 GSM437128 GSM437129 GSM437130 GSM437131 GSM437132 GSM437133 GSM437134 GSM437135 GSM437136 GSM437137 GSM437138 GSM437139 GSM437140 GSM437141 GSM437142 GSM437143 GSM437144 GSM437145 GSM437146 GSM437147 GSM437148 GSM437149 GSM437150 GSM437151 GSM437152 GSM437153 GSM437154 GSM437155 GSM437156 GSM437157 GSM437158 GSM437159 GSM437160 GSM437161 GSM437162 GSM437163 GSM437164 GSM437165 GSM437166 GSM437167 GSM437168 GSM437169 GSM437170 GSM437171 GSM437172 GSM437173 GSM437174 GSM437175 GSM437176 GSM437177 GSM437178 GSM437179 GSM437180 GSM437181 GSM437182 GSM437183 GSM437184 GSM437185 GSM437186 GSM437187 GSM437188 GSM437189 GSM437190 GSM437191 GSM437192 GSM437193 GSM437194 GSM437195 GSM437196 GSM437197 GSM437198 GSM437199 GSM437200 GSM437201 GSM437202 GSM437203 GSM437204 GSM437205 GSM437206 GSM437207 GSM437208 GSM437209 GSM437210 GSM437211 GSM437212 GSM437213 GSM437214 GSM437215 GSM437216 GSM437217 GSM437218 GSM437219 GSM437220 GSM437221 GSM437222 GSM437223 GSM437224 GSM437225 GSM437226 GSM437227 GSM437228 GSM437229 GSM437230 GSM437231 GSM437232 GSM437233 GSM437234 GSM437235 GSM437236 GSM437237 GSM437238 GSM437239 GSM437240 GSM437241 GSM437242 GSM437243 GSM437244 GSM437245 GSM437246 GSM437247 GSM437248 GSM437249 GSM437250 GSM437251 GSM437252 GSM437253 GSM437254 GSM437255 GSM437256 GSM437257 GSM437258 GSM437259 GSM437260 GSM437261 GSM437262 GSM437263 GSM437264 GSM437265 GSM437266 GSM437267 GSM437268 GSM437269 GSM437270 GSM437271 GSM437272 GSM437273 GSM437274 GSM437275 GSM437276 GSM437277 GSM437278 GSM437279 GSM437280 GSM437281 GSM437282 GSM437283 GSM437284 GSM437285 GSM437286 GSM437287 GSM437288 GSM437289 GSM437290 GSM437291 GSM437292 GSM437293 GSM437294 GSM437295 GSM437296 GSM437297 GSM437298 GSM437299 GSM437300 GSM437301 GSM437302 GSM437303 GSM437304 GSM437305 GSM437306 GSM437307 GSM437308 GSM437309 GSM437310 GSM437311 GSM437312 GSM437313 GSM437314 GSM437315 GSM437316 GSM437317 GSM437318 GSM437319 GSM437320 GSM437321 GSM437322 GSM437323 GSM437324 GSM472192 GSM472193 GSM472194 GSM472195 GSM472196 GSM472197 GSM472198 GSM472199 GSM472200 GSM472201 GSM472202 GSM472203

Dataset Citations (4)

PubMed citation (PMID 19914252)
PubMed citation (PMID 22115830)
PubMed citation (PMID 25916654)
PubMed citation (PMID 30606770)

Linked Publications (1)

DDX5 promotes oncogene C3 and FABP1 expressions and drives intestinal inflammation and tumorigenesis.
Life science alliance · 2020