ENCSR055HDN
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against HNRNPDL
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of HNRNPDL in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against HNRNPDL
Analysis
View Data Processing
Analysis page is available for ENCSR055HDN.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 1.5 GBFiles: 13
Unique ENC file IDs: 13
File Formats
tsv (8)
fastq (5)
Output types (3)
reads (5)
enrichment (4)
library fraction (4)
Linked Publications (1)
Data Files (13)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF032BNE | ENCFF032BNE.fastq | fastq (reads) | reads | 338.3 MB | link | ||
| ENCFF495RWY | ENCFF495RWY.fastq | fastq (reads) | reads | 290.9 MB | link | ||
| ENCFF566PVD | ENCFF566PVD.fastq | fastq (reads) | reads | 283.0 MB | link | ||
| ENCFF613XWY | ENCFF613XWY.fastq | fastq (reads) | reads | 282.6 MB | link | ||
| ENCFF694BLE | ENCFF694BLE.fastq | fastq (reads) | reads | 360.9 MB | link | ||
| ENCFF074YRT | ENCFF074YRT.tsv | tsv (enrichment) | enrichment | 41.0 KB | link | ||
| ENCFF223UQZ | ENCFF223UQZ.tsv | tsv (enrichment) | enrichment | 10.0 KB | link | ||
| ENCFF554UMM | ENCFF554UMM.tsv | tsv (enrichment) | enrichment | 688.0 KB | link | ||
| ENCFF973JIY | ENCFF973JIY.tsv | tsv (enrichment) | enrichment | 168.0 KB | link | ||
| ENCFF194JIU | ENCFF194JIU.tsv | tsv (library fraction) | library fraction | 265.4 KB | link | ||
| ENCFF603UTU | ENCFF603UTU.tsv | tsv (library fraction) | library fraction | 15.1 KB | link | ||
| ENCFF615HRC | ENCFF615HRC.tsv | tsv (library fraction) | library fraction | 1.1 MB | link | ||
| ENCFF683ZMK | ENCFF683ZMK.tsv | tsv (library fraction) | library fraction | 63.9 KB | link |