ENCSR834CED
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against NOVA1
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of NOVA1 in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against NOVA1
Analysis
View Data Processing
Analysis page is available for ENCSR834CED.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 2.5 GBFiles: 13
Unique ENC file IDs: 13
File Formats
tsv (8)
fastq (5)
Output types (3)
reads (5)
enrichment (4)
library fraction (4)
Linked Publications (1)
Data Files (13)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF510DKF | ENCFF510DKF.fastq | fastq (reads) | reads | 550.0 MB | link | ||
| ENCFF557ODA | ENCFF557ODA.fastq | fastq (reads) | reads | 428.0 MB | link | ||
| ENCFF773ACP | ENCFF773ACP.fastq | fastq (reads) | reads | 536.5 MB | link | ||
| ENCFF850IFW | ENCFF850IFW.fastq | fastq (reads) | reads | 525.6 MB | link | ||
| ENCFF892LGW | ENCFF892LGW.fastq | fastq (reads) | reads | 562.6 MB | link | ||
| ENCFF591ONJ | ENCFF591ONJ.tsv | tsv (enrichment) | enrichment | 41.0 KB | link | ||
| ENCFF657EGF | ENCFF657EGF.tsv | tsv (enrichment) | enrichment | 10.0 KB | link | ||
| ENCFF666GNP | ENCFF666GNP.tsv | tsv (enrichment) | enrichment | 688.1 KB | link | ||
| ENCFF953ZVY | ENCFF953ZVY.tsv | tsv (enrichment) | enrichment | 168.0 KB | link | ||
| ENCFF208MMN | ENCFF208MMN.tsv | tsv (library fraction) | library fraction | 1.1 MB | link | ||
| ENCFF666KVW | ENCFF666KVW.tsv | tsv (library fraction) | library fraction | 264.8 KB | link | ||
| ENCFF956XSQ | ENCFF956XSQ.tsv | tsv (library fraction) | library fraction | 15.7 KB | link | ||
| ENCFF998MJP | ENCFF998MJP.tsv | tsv (library fraction) | library fraction | 64.6 KB | link |