ENCSR741VUK
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against TRA2A
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of TRA2A in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against TRA2A
Analysis
View Data Processing
Analysis page is available for ENCSR741VUK.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 1.3 GBFiles: 15
Unique ENC file IDs: 15
File Formats
tsv (8)
fastq (5)
bed (2)
Output types (4)
reads (5)
enrichment (4)
library fraction (4)
peaks (2)
Linked Publications (1)
Data Files (15)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF015CJR | ENCFF015CJR.bed | bed (peaks) | peaks | 85.3 KB | link | ||
| ENCFF425CRZ | ENCFF425CRZ.bed | bed (peaks) | peaks | 138.6 KB | link | ||
| ENCFF053JOA | ENCFF053JOA.fastq | fastq (reads) | reads | 361.7 MB | link | ||
| ENCFF209PWZ | ENCFF209PWZ.fastq | fastq (reads) | reads | 338.7 MB | link | ||
| ENCFF369HLN | ENCFF369HLN.fastq | fastq (reads) | reads | 261.7 MB | link | ||
| ENCFF406VDD | ENCFF406VDD.fastq | fastq (reads) | reads | 234.1 MB | link | ||
| ENCFF674LSW | ENCFF674LSW.fastq | fastq (reads) | reads | 175.2 MB | link | ||
| ENCFF191NLM | ENCFF191NLM.tsv | tsv (enrichment) | enrichment | 48.0 KB | link | ||
| ENCFF351RRP | ENCFF351RRP.tsv | tsv (enrichment) | enrichment | 196.0 KB | link | ||
| ENCFF879MFV | ENCFF879MFV.tsv | tsv (enrichment) | enrichment | 11.8 KB | link | ||
| ENCFF971NRM | ENCFF971NRM.tsv | tsv (enrichment) | enrichment | 800.0 KB | link | ||
| ENCFF115SBU | ENCFF115SBU.tsv | tsv (library fraction) | library fraction | 75.9 KB | link | ||
| ENCFF191XFI | ENCFF191XFI.tsv | tsv (library fraction) | library fraction | 18.1 KB | link | ||
| ENCFF517XHH | ENCFF517XHH.tsv | tsv (library fraction) | library fraction | 1.2 MB | link | ||
| ENCFF804SZR | ENCFF804SZR.tsv | tsv (library fraction) | library fraction | 312.7 KB | link |