ENCSR254UDV
ENCSR ENCODEControl ChIP-seq on HepG2
Organism:
Homo sapiens
Experiment Types:
Control ChIP-seq
Status:
released
Contact:
Xiang-Dong Fu, UCSD
Summary
Control ChIP-seq of in Homo sapiens HepG2
Overall Design
Control ChIP-seq on HepG2
Analysis
View Data Processing
Analysis page is available for ENCSR254UDV.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 23.2 GBAssay: Control ChIP-seq
Biosample: Homo sapiens HepG2
Files: 14
Unique ENC file IDs: 14
File Formats
bam (12)
fastq (2)
Output types (3)
alignments (6)
unfiltered alignments (6)
reads (2)
Linked Publications (1)
Data Files (14)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF083RZJ | ENCFF083RZJ.bam | bam (alignments) | alignments | 1.4 GB | link | ||
| ENCFF475UDH | ENCFF475UDH.bam | bam (alignments) | alignments | 1.6 GB | link | ||
| ENCFF568YOD | ENCFF568YOD.bam | bam (alignments) | alignments | 1.5 GB | link | ||
| ENCFF736TJP | ENCFF736TJP.bam | bam (alignments) | alignments | 1.5 GB | link | ||
| ENCFF770PNC | ENCFF770PNC.bam | bam (alignments) | alignments | 1.5 GB | link | ||
| ENCFF842ALK | ENCFF842ALK.bam | bam (alignments) | alignments | 1.4 GB | link | ||
| ENCFF152IKD | ENCFF152IKD.bam | bam (unfiltered alignments) | unfiltered alignments | 1.8 GB | link | ||
| ENCFF271JZR | ENCFF271JZR.bam | bam (unfiltered alignments) | unfiltered alignments | 2.0 GB | link | ||
| ENCFF326HAL | ENCFF326HAL.bam | bam (unfiltered alignments) | unfiltered alignments | 1.8 GB | link | ||
| ENCFF461RWK | ENCFF461RWK.bam | bam (unfiltered alignments) | unfiltered alignments | 2.0 GB | link | ||
| ENCFF558AOU | ENCFF558AOU.bam | bam (unfiltered alignments) | unfiltered alignments | 2.0 GB | link | ||
| ENCFF978ZZB | ENCFF978ZZB.bam | bam (unfiltered alignments) | unfiltered alignments | 1.8 GB | link | ||
| ENCFF218RAX | ENCFF218RAX.fastq | fastq (reads) | reads | 1.4 GB | link | ||
| ENCFF743NIF | ENCFF743NIF.fastq | fastq (reads) | reads | 1.3 GB | link |