ENCSR318HZC
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against SF1
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of SF1 in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against SF1
Analysis
View Data Processing
Analysis page is available for ENCSR318HZC.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 2.0 GBFiles: 13
Unique ENC file IDs: 13
File Formats
tsv (8)
fastq (5)
Output types (3)
reads (5)
enrichment (4)
library fraction (4)
Linked Publications (1)
Data Files (13)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF310EFE | ENCFF310EFE.fastq | fastq (reads) | reads | 60.1 MB | link | ||
| ENCFF550BZS | ENCFF550BZS.fastq | fastq (reads) | reads | 632.5 MB | link | ||
| ENCFF574ATK | ENCFF574ATK.fastq | fastq (reads) | reads | 586.9 MB | link | ||
| ENCFF620JEI | ENCFF620JEI.fastq | fastq (reads) | reads | 105.6 MB | link | ||
| ENCFF894RNB | ENCFF894RNB.fastq | fastq (reads) | reads | 620.7 MB | link | ||
| ENCFF045VHV | ENCFF045VHV.tsv | tsv (enrichment) | enrichment | 10.0 KB | link | ||
| ENCFF408CLJ | ENCFF408CLJ.tsv | tsv (enrichment) | enrichment | 168.0 KB | link | ||
| ENCFF753JLV | ENCFF753JLV.tsv | tsv (enrichment) | enrichment | 688.0 KB | link | ||
| ENCFF846RCG | ENCFF846RCG.tsv | tsv (enrichment) | enrichment | 41.0 KB | link | ||
| ENCFF268MJA | ENCFF268MJA.tsv | tsv (library fraction) | library fraction | 1.1 MB | link | ||
| ENCFF514OMP | ENCFF514OMP.tsv | tsv (library fraction) | library fraction | 265.4 KB | link | ||
| ENCFF580RLC | ENCFF580RLC.tsv | tsv (library fraction) | library fraction | 15.2 KB | link | ||
| ENCFF990CLK | ENCFF990CLK.tsv | tsv (library fraction) | library fraction | 64.1 KB | link |