ENCSR329RIP
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against MSI1
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of MSI1 in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against MSI1
Analysis
View Data Processing
Analysis page is available for ENCSR329RIP.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 3.3 GBFiles: 15
Unique ENC file IDs: 15
File Formats
tsv (8)
fastq (7)
Output types (3)
reads (7)
enrichment (4)
library fraction (4)
Linked Publications (1)
Data Files (15)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF049COJ | ENCFF049COJ.fastq | fastq (reads) | reads | 489.3 MB | link | ||
| ENCFF110LAR | ENCFF110LAR.fastq | fastq (reads) | reads | 514.4 MB | link | ||
| ENCFF200FEI | ENCFF200FEI.fastq | fastq (reads) | reads | 429.0 MB | link | ||
| ENCFF278ERO | ENCFF278ERO.fastq | fastq (reads) | reads | 504.7 MB | link | ||
| ENCFF518PVS | ENCFF518PVS.fastq | fastq (reads) | reads | 519.4 MB | link | ||
| ENCFF695CIJ | ENCFF695CIJ.fastq | fastq (reads) | reads | 546.0 MB | link | ||
| ENCFF922BHB | ENCFF922BHB.fastq | fastq (reads) | reads | 378.6 MB | link | ||
| ENCFF171TZH | ENCFF171TZH.tsv | tsv (enrichment) | enrichment | 1.3 MB | link | ||
| ENCFF200ERL | ENCFF200ERL.tsv | tsv (enrichment) | enrichment | 19.3 KB | link | ||
| ENCFF506LTL | ENCFF506LTL.tsv | tsv (enrichment) | enrichment | 78.0 KB | link | ||
| ENCFF701XPF | ENCFF701XPF.tsv | tsv (enrichment) | enrichment | 316.0 KB | link | ||
| ENCFF007RBS | ENCFF007RBS.tsv | tsv (library fraction) | library fraction | 1.6 MB | link | ||
| ENCFF488UTB | ENCFF488UTB.tsv | tsv (library fraction) | library fraction | 24.1 KB | link | ||
| ENCFF933GJV | ENCFF933GJV.tsv | tsv (library fraction) | library fraction | 406.4 KB | link | ||
| ENCFF996BLZ | ENCFF996BLZ.tsv | tsv (library fraction) | library fraction | 99.5 KB | link |