ENCSR655NWZ
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against RBM15B
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of RBM15B in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against RBM15B
Analysis
View Data Processing
Analysis page is available for ENCSR655NWZ.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 1.6 GBFiles: 15
Unique ENC file IDs: 15
File Formats
tsv (8)
fastq (5)
bed (2)
Output types (4)
reads (5)
enrichment (4)
library fraction (4)
peaks (2)
Linked Publications (1)
Data Files (15)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF185NKV | ENCFF185NKV.bed | bed (peaks) | peaks | 559.9 KB | link | ||
| ENCFF794MIP | ENCFF794MIP.bed | bed (peaks) | peaks | 93.3 KB | link | ||
| ENCFF037HIV | ENCFF037HIV.fastq | fastq (reads) | reads | 255.5 MB | link | ||
| ENCFF160QZD | ENCFF160QZD.fastq | fastq (reads) | reads | 324.3 MB | link | ||
| ENCFF234HVI | ENCFF234HVI.fastq | fastq (reads) | reads | 420.2 MB | link | ||
| ENCFF461ZWO | ENCFF461ZWO.fastq | fastq (reads) | reads | 344.5 MB | link | ||
| ENCFF772AJT | ENCFF772AJT.fastq | fastq (reads) | reads | 271.8 MB | link | ||
| ENCFF117RDG | ENCFF117RDG.tsv | tsv (enrichment) | enrichment | 168.0 KB | link | ||
| ENCFF635SCW | ENCFF635SCW.tsv | tsv (enrichment) | enrichment | 41.0 KB | link | ||
| ENCFF820ODU | ENCFF820ODU.tsv | tsv (enrichment) | enrichment | 10.0 KB | link | ||
| ENCFF915OWQ | ENCFF915OWQ.tsv | tsv (enrichment) | enrichment | 688.0 KB | link | ||
| ENCFF103BRR | ENCFF103BRR.tsv | tsv (library fraction) | library fraction | 265.2 KB | link | ||
| ENCFF249WKL | ENCFF249WKL.tsv | tsv (library fraction) | library fraction | 15.2 KB | link | ||
| ENCFF338IXJ | ENCFF338IXJ.tsv | tsv (library fraction) | library fraction | 1.1 MB | link | ||
| ENCFF568JRD | ENCFF568JRD.tsv | tsv (library fraction) | library fraction | 63.9 KB | link |