ENCSR331BKR
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against RBM4
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of RBM4 in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against RBM4
Analysis
View Data Processing
Analysis page is available for ENCSR331BKR.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 2.0 GBFiles: 13
Unique ENC file IDs: 13
File Formats
tsv (8)
fastq (5)
Output types (3)
reads (5)
enrichment (4)
library fraction (4)
Linked Publications (1)
Data Files (13)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF290VRZ | ENCFF290VRZ.fastq | fastq (reads) | reads | 448.8 MB | link | ||
| ENCFF401FZE | ENCFF401FZE.fastq | fastq (reads) | reads | 375.6 MB | link | ||
| ENCFF527ZSP | ENCFF527ZSP.fastq | fastq (reads) | reads | 368.1 MB | link | ||
| ENCFF662YDT | ENCFF662YDT.fastq | fastq (reads) | reads | 389.7 MB | link | ||
| ENCFF940CRO | ENCFF940CRO.fastq | fastq (reads) | reads | 412.4 MB | link | ||
| ENCFF108CRY | ENCFF108CRY.tsv | tsv (enrichment) | enrichment | 688.0 KB | link | ||
| ENCFF620EXI | ENCFF620EXI.tsv | tsv (enrichment) | enrichment | 41.0 KB | link | ||
| ENCFF667LUD | ENCFF667LUD.tsv | tsv (enrichment) | enrichment | 10.0 KB | link | ||
| ENCFF891RFM | ENCFF891RFM.tsv | tsv (enrichment) | enrichment | 168.0 KB | link | ||
| ENCFF290ZZD | ENCFF290ZZD.tsv | tsv (library fraction) | library fraction | 1.1 MB | link | ||
| ENCFF395DTW | ENCFF395DTW.tsv | tsv (library fraction) | library fraction | 265.4 KB | link | ||
| ENCFF399HBQ | ENCFF399HBQ.tsv | tsv (library fraction) | library fraction | 63.8 KB | link | ||
| ENCFF870FLG | ENCFF870FLG.tsv | tsv (library fraction) | library fraction | 15.2 KB | link |