ENCSR005ZRL
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against DAZAP1
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of DAZAP1 in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against DAZAP1
Analysis
View Data Processing
Analysis page is available for ENCSR005ZRL.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 1.8 GBFiles: 13
Unique ENC file IDs: 13
File Formats
tsv (8)
fastq (5)
Output types (3)
reads (5)
enrichment (4)
library fraction (4)
Linked Publications (1)
Data Files (13)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF159FNQ | ENCFF159FNQ.fastq | fastq (reads) | reads | 498.0 MB | link | ||
| ENCFF387GNF | ENCFF387GNF.fastq | fastq (reads) | reads | 209.8 MB | link | ||
| ENCFF548LGA | ENCFF548LGA.fastq | fastq (reads) | reads | 559.8 MB | link | ||
| ENCFF766DOA | ENCFF766DOA.fastq | fastq (reads) | reads | 349.7 MB | link | ||
| ENCFF887GOK | ENCFF887GOK.fastq | fastq (reads) | reads | 185.6 MB | link | ||
| ENCFF102BFN | ENCFF102BFN.tsv | tsv (enrichment) | enrichment | 41.0 KB | link | ||
| ENCFF156RLV | ENCFF156RLV.tsv | tsv (enrichment) | enrichment | 168.0 KB | link | ||
| ENCFF190ZRO | ENCFF190ZRO.tsv | tsv (enrichment) | enrichment | 688.0 KB | link | ||
| ENCFF756ZGX | ENCFF756ZGX.tsv | tsv (enrichment) | enrichment | 10.0 KB | link | ||
| ENCFF668HCA | ENCFF668HCA.tsv | tsv (library fraction) | library fraction | 15.3 KB | link | ||
| ENCFF738COE | ENCFF738COE.tsv | tsv (library fraction) | library fraction | 1.1 MB | link | ||
| ENCFF867JXH | ENCFF867JXH.tsv | tsv (library fraction) | library fraction | 264.9 KB | link | ||
| ENCFF884UAX | ENCFF884UAX.tsv | tsv (library fraction) | library fraction | 64.0 KB | link |