ENCSR376SUZ
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against hnRNPF
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of HNRNPF in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against hnRNPF
Analysis
View Data Processing
Analysis page is available for ENCSR376SUZ.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 3.0 GBFiles: 11
Unique ENC file IDs: 11
File Formats
tsv (6)
fastq (5)
Output types (3)
reads (5)
enrichment (3)
library fraction (3)
Linked Publications (1)
Data Files (11)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF002DGB | ENCFF002DGB.fastq | fastq (reads) | reads | 626.0 MB | link | ||
| ENCFF002DGC | ENCFF002DGC.fastq | fastq (reads) | reads | 597.5 MB | link | ||
| ENCFF002DGD | ENCFF002DGD.fastq | fastq (reads) | reads | 620.4 MB | link | ||
| ENCFF002DGE | ENCFF002DGE.fastq | fastq (reads) | reads | 544.2 MB | link | ||
| ENCFF002DGF | ENCFF002DGF.fastq | fastq (reads) | reads | 641.5 MB | link | ||
| ENCFF002DEM | ENCFF002DEM.tsv | tsv (enrichment) | enrichment | 60.0 KB | link | ||
| ENCFF002DEN | ENCFF002DEN.tsv | tsv (enrichment) | enrichment | 244.0 KB | link | ||
| ENCFF002DEO | ENCFF002DEO.tsv | tsv (enrichment) | enrichment | 992.0 KB | link | ||
| ENCFF002DEP | ENCFF002DEP.tsv | tsv (library fraction) | library fraction | 76.3 KB | link | ||
| ENCFF002DEQ | ENCFF002DEQ.tsv | tsv (library fraction) | library fraction | 312.5 KB | link | ||
| ENCFF002DER | ENCFF002DER.tsv | tsv (library fraction) | library fraction | 1.2 MB | link |