ENCSR175OMA
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against hnRNPD
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of HNRNPD in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against hnRNPD
Analysis
View Data Processing
Analysis page is available for ENCSR175OMA.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 2.9 GBFiles: 11
Unique ENC file IDs: 11
File Formats
tsv (6)
fastq (5)
Output types (3)
reads (5)
enrichment (3)
library fraction (3)
Linked Publications (1)
Data Files (11)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF002DFU | ENCFF002DFU.fastq | fastq (reads) | reads | 518.8 MB | link | ||
| ENCFF002DFV | ENCFF002DFV.fastq | fastq (reads) | reads | 580.6 MB | link | ||
| ENCFF002DFW | ENCFF002DFW.fastq | fastq (reads) | reads | 639.3 MB | link | ||
| ENCFF002DFX | ENCFF002DFX.fastq | fastq (reads) | reads | 644.8 MB | link | ||
| ENCFF002DFY | ENCFF002DFY.fastq | fastq (reads) | reads | 548.0 MB | link | ||
| ENCFF002DEG | ENCFF002DEG.tsv | tsv (enrichment) | enrichment | 60.0 KB | link | ||
| ENCFF002DEH | ENCFF002DEH.tsv | tsv (enrichment) | enrichment | 244.0 KB | link | ||
| ENCFF002DEI | ENCFF002DEI.tsv | tsv (enrichment) | enrichment | 992.0 KB | link | ||
| ENCFF002DEJ | ENCFF002DEJ.tsv | tsv (library fraction) | library fraction | 76.4 KB | link | ||
| ENCFF002DEK | ENCFF002DEK.tsv | tsv (library fraction) | library fraction | 312.3 KB | link | ||
| ENCFF002DEL | ENCFF002DEL.tsv | tsv (library fraction) | library fraction | 1.2 MB | link |