ENCSR063HQO
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against EWSR1
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of EWSR1 in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against EWSR1
Analysis
View Data Processing
Analysis page is available for ENCSR063HQO.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 1.6 GBFiles: 12
Unique ENC file IDs: 12
File Formats
tsv (6)
fastq (5)
bed (1)
Output types (4)
reads (5)
enrichment (3)
library fraction (3)
peaks (1)
Linked Publications (1)
Data Files (12)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF283ODT | ENCFF283ODT.bed | bed (peaks) | peaks | 655.2 KB | link | ||
| ENCFF352GUJ | ENCFF352GUJ.fastq | fastq (reads) | reads | 350.1 MB | link | ||
| ENCFF561OTA | ENCFF561OTA.fastq | fastq (reads) | reads | 445.3 MB | link | ||
| ENCFF690OPZ | ENCFF690OPZ.fastq | fastq (reads) | reads | 342.8 MB | link | ||
| ENCFF806UZR | ENCFF806UZR.fastq | fastq (reads) | reads | 356.2 MB | link | ||
| ENCFF846YUO | ENCFF846YUO.fastq | fastq (reads) | reads | 163.6 MB | link | ||
| ENCFF100OEJ | ENCFF100OEJ.tsv | tsv (enrichment) | enrichment | 51.0 KB | link | ||
| ENCFF364MOL | ENCFF364MOL.tsv | tsv (enrichment) | enrichment | 208.0 KB | link | ||
| ENCFF589AOW | ENCFF589AOW.tsv | tsv (enrichment) | enrichment | 12.5 KB | link | ||
| ENCFF127WKQ | ENCFF127WKQ.tsv | tsv (library fraction) | library fraction | 17.8 KB | link | ||
| ENCFF484JBC | ENCFF484JBC.tsv | tsv (library fraction) | library fraction | 313.1 KB | link | ||
| ENCFF500XUN | ENCFF500XUN.tsv | tsv (library fraction) | library fraction | 75.2 KB | link |