ENCSR843QMF
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against FUBP1
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of FUBP1 in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against FUBP1
Analysis
View Data Processing
Analysis page is available for ENCSR843QMF.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 3.2 GBFiles: 13
Unique ENC file IDs: 13
File Formats
tsv (8)
fastq (5)
Output types (3)
reads (5)
enrichment (4)
library fraction (4)
Linked Publications (1)
Data Files (13)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF319TXL | ENCFF319TXL.fastq | fastq (reads) | reads | 544.5 MB | link | ||
| ENCFF597MHG | ENCFF597MHG.fastq | fastq (reads) | reads | 561.2 MB | link | ||
| ENCFF624STJ | ENCFF624STJ.fastq | fastq (reads) | reads | 449.4 MB | link | ||
| ENCFF677VDN | ENCFF677VDN.fastq | fastq (reads) | reads | 1.5 GB | link | ||
| ENCFF884IBI | ENCFF884IBI.fastq | fastq (reads) | reads | 246.9 MB | link | ||
| ENCFF078JLK | ENCFF078JLK.tsv | tsv (enrichment) | enrichment | 10.0 KB | link | ||
| ENCFF259WWZ | ENCFF259WWZ.tsv | tsv (enrichment) | enrichment | 688.0 KB | link | ||
| ENCFF588INN | ENCFF588INN.tsv | tsv (enrichment) | enrichment | 41.0 KB | link | ||
| ENCFF975CXE | ENCFF975CXE.tsv | tsv (enrichment) | enrichment | 168.0 KB | link | ||
| ENCFF064EZC | ENCFF064EZC.tsv | tsv (library fraction) | library fraction | 265.4 KB | link | ||
| ENCFF438XEM | ENCFF438XEM.tsv | tsv (library fraction) | library fraction | 1.1 MB | link | ||
| ENCFF679FDX | ENCFF679FDX.tsv | tsv (library fraction) | library fraction | 15.2 KB | link | ||
| ENCFF994WHR | ENCFF994WHR.tsv | tsv (library fraction) | library fraction | 63.9 KB | link |