ENCSR064NOY
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against TIA1
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of TIA1 in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against TIA1
Analysis
View Data Processing
Analysis page is available for ENCSR064NOY.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 1.8 GBFiles: 15
Unique ENC file IDs: 15
File Formats
tsv (8)
fastq (5)
bed (2)
Output types (4)
reads (5)
enrichment (4)
library fraction (4)
peaks (2)
Linked Publications (1)
Data Files (15)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF025PCM | ENCFF025PCM.bed | bed (peaks) | peaks | 122.3 KB | link | ||
| ENCFF748GRE | ENCFF748GRE.bed | bed (peaks) | peaks | 408.2 KB | link | ||
| ENCFF278GIB | ENCFF278GIB.fastq | fastq (reads) | reads | 332.0 MB | link | ||
| ENCFF374UTI | ENCFF374UTI.fastq | fastq (reads) | reads | 444.4 MB | link | ||
| ENCFF400JXE | ENCFF400JXE.fastq | fastq (reads) | reads | 305.0 MB | link | ||
| ENCFF815CIK | ENCFF815CIK.fastq | fastq (reads) | reads | 278.2 MB | link | ||
| ENCFF897ONM | ENCFF897ONM.fastq | fastq (reads) | reads | 447.1 MB | link | ||
| ENCFF268DAL | ENCFF268DAL.tsv | tsv (enrichment) | enrichment | 168.0 KB | link | ||
| ENCFF403RUI | ENCFF403RUI.tsv | tsv (enrichment) | enrichment | 10.0 KB | link | ||
| ENCFF633HPI | ENCFF633HPI.tsv | tsv (enrichment) | enrichment | 688.0 KB | link | ||
| ENCFF936GUV | ENCFF936GUV.tsv | tsv (enrichment) | enrichment | 41.0 KB | link | ||
| ENCFF042KLN | ENCFF042KLN.tsv | tsv (library fraction) | library fraction | 15.1 KB | link | ||
| ENCFF217XXK | ENCFF217XXK.tsv | tsv (library fraction) | library fraction | 63.8 KB | link | ||
| ENCFF424RKK | ENCFF424RKK.tsv | tsv (library fraction) | library fraction | 1.1 MB | link | ||
| ENCFF540NRR | ENCFF540NRR.tsv | tsv (library fraction) | library fraction | 265.5 KB | link |