ENCSR673FLQ
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against PCBP2
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of PCBP2 in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against PCBP2
Analysis
View Data Processing
Analysis page is available for ENCSR673FLQ.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 2.2 GBFiles: 14
Unique ENC file IDs: 14
File Formats
tsv (8)
fastq (5)
bed (1)
Output types (4)
reads (5)
enrichment (4)
library fraction (4)
peaks (1)
Linked Publications (1)
Data Files (14)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF999HRP | ENCFF999HRP.bed | bed (peaks) | peaks | 689.0 KB | link | ||
| ENCFF020KTF | ENCFF020KTF.fastq | fastq (reads) | reads | 399.6 MB | link | ||
| ENCFF053JNP | ENCFF053JNP.fastq | fastq (reads) | reads | 370.4 MB | link | ||
| ENCFF058WPN | ENCFF058WPN.fastq | fastq (reads) | reads | 476.3 MB | link | ||
| ENCFF691SCA | ENCFF691SCA.fastq | fastq (reads) | reads | 658.4 MB | link | ||
| ENCFF798SMM | ENCFF798SMM.fastq | fastq (reads) | reads | 359.1 MB | link | ||
| ENCFF024ODR | ENCFF024ODR.tsv | tsv (enrichment) | enrichment | 168.1 KB | link | ||
| ENCFF282GMF | ENCFF282GMF.tsv | tsv (enrichment) | enrichment | 688.1 KB | link | ||
| ENCFF761GIK | ENCFF761GIK.tsv | tsv (enrichment) | enrichment | 41.0 KB | link | ||
| ENCFF908FAV | ENCFF908FAV.tsv | tsv (enrichment) | enrichment | 10.0 KB | link | ||
| ENCFF203BAO | ENCFF203BAO.tsv | tsv (library fraction) | library fraction | 265.2 KB | link | ||
| ENCFF877XOK | ENCFF877XOK.tsv | tsv (library fraction) | library fraction | 15.3 KB | link | ||
| ENCFF884AGK | ENCFF884AGK.tsv | tsv (library fraction) | library fraction | 1.1 MB | link | ||
| ENCFF986WIW | ENCFF986WIW.tsv | tsv (library fraction) | library fraction | 64.1 KB | link |