ENCSR600HIW
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against EIF4G2
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of EIF4G2 in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against EIF4G2
Analysis
View Data Processing
Analysis page is available for ENCSR600HIW.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 1.2 GBFiles: 17
Unique ENC file IDs: 17
File Formats
tsv (11)
fastq (5)
bed (1)
Output types (4)
enrichment (7)
reads (5)
library fraction (4)
peaks (1)
Linked Publications (1)
Data Files (17)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF396JVK | ENCFF396JVK.bed | bed (peaks) | peaks | 284.3 KB | link | ||
| ENCFF483PKV | ENCFF483PKV.fastq | fastq (reads) | reads | 163.6 MB | link | ||
| ENCFF531KCO | ENCFF531KCO.fastq | fastq (reads) | reads | 282.6 MB | link | ||
| ENCFF613BOZ | ENCFF613BOZ.fastq | fastq (reads) | reads | 236.8 MB | link | ||
| ENCFF747XEL | ENCFF747XEL.fastq | fastq (reads) | reads | 186.4 MB | link | ||
| ENCFF798BTI | ENCFF798BTI.fastq | fastq (reads) | reads | 379.2 MB | link | ||
| ENCFF047JVW | ENCFF047JVW.tsv | tsv (enrichment) | enrichment | 168.0 KB | link | ||
| ENCFF083UGT | ENCFF083UGT.tsv | tsv (enrichment) | enrichment | 41.0 KB | link | ||
| ENCFF196LGM | ENCFF196LGM.tsv | tsv (enrichment) | enrichment | 238.0 B | link | ||
| ENCFF310LNQ | ENCFF310LNQ.tsv | tsv (enrichment) | enrichment | 688.0 KB | link | ||
| ENCFF409BQS | ENCFF409BQS.tsv | tsv (enrichment) | enrichment | 10.0 KB | link | ||
| ENCFF519MEJ | ENCFF519MEJ.tsv | tsv (enrichment) | enrichment | 109.0 B | link | ||
| ENCFF749OEM | ENCFF749OEM.tsv | tsv (enrichment) | enrichment | 109.0 B | link | ||
| ENCFF048OJX | ENCFF048OJX.tsv | tsv (library fraction) | library fraction | 1.1 MB | link | ||
| ENCFF125ULL | ENCFF125ULL.tsv | tsv (library fraction) | library fraction | 15.1 KB | link | ||
| ENCFF388SBU | ENCFF388SBU.tsv | tsv (library fraction) | library fraction | 265.8 KB | link | ||
| ENCFF582ZAS | ENCFF582ZAS.tsv | tsv (library fraction) | library fraction | 63.5 KB | link |