ENCSR264RVK
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against RBM47
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of RBM47 in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against RBM47
Analysis
View Data Processing
Analysis page is available for ENCSR264RVK.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 3.1 GBFiles: 14
Unique ENC file IDs: 14
File Formats
tsv (8)
fastq (6)
Output types (3)
reads (6)
enrichment (4)
library fraction (4)
Linked Publications (1)
Data Files (14)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF051CMM | ENCFF051CMM.fastq | fastq (reads) | reads | 412.6 MB | link | ||
| ENCFF152YBN | ENCFF152YBN.fastq | fastq (reads) | reads | 455.4 MB | link | ||
| ENCFF211NKK | ENCFF211NKK.fastq | fastq (reads) | reads | 715.1 MB | link | ||
| ENCFF546CET | ENCFF546CET.fastq | fastq (reads) | reads | 414.5 MB | link | ||
| ENCFF650UUT | ENCFF650UUT.fastq | fastq (reads) | reads | 614.5 MB | link | ||
| ENCFF753GNQ | ENCFF753GNQ.fastq | fastq (reads) | reads | 579.2 MB | link | ||
| ENCFF063VIP | ENCFF063VIP.tsv | tsv (enrichment) | enrichment | 224.1 KB | link | ||
| ENCFF639XVL | ENCFF639XVL.tsv | tsv (enrichment) | enrichment | 13.6 KB | link | ||
| ENCFF953ZVW | ENCFF953ZVW.tsv | tsv (enrichment) | enrichment | 55.1 KB | link | ||
| ENCFF995ECH | ENCFF995ECH.tsv | tsv (enrichment) | enrichment | 912.1 KB | link | ||
| ENCFF034WGD | ENCFF034WGD.tsv | tsv (library fraction) | library fraction | 1.4 MB | link | ||
| ENCFF124DAS | ENCFF124DAS.tsv | tsv (library fraction) | library fraction | 359.5 KB | link | ||
| ENCFF309STS | ENCFF309STS.tsv | tsv (library fraction) | library fraction | 88.1 KB | link | ||
| ENCFF689ZBZ | ENCFF689ZBZ.tsv | tsv (library fraction) | library fraction | 21.4 KB | link |