ENCSR102MQN
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against NUPL2
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of NUPL2 in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against NUPL2
Analysis
View Data Processing
Analysis page is available for ENCSR102MQN.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 2.0 GBFiles: 15
Unique ENC file IDs: 15
File Formats
tsv (10)
fastq (5)
Output types (3)
enrichment (6)
reads (5)
library fraction (4)
Linked Publications (1)
Data Files (15)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF143HKO | ENCFF143HKO.fastq | fastq (reads) | reads | 370.6 MB | link | ||
| ENCFF174KHL | ENCFF174KHL.fastq | fastq (reads) | reads | 456.2 MB | link | ||
| ENCFF452SPV | ENCFF452SPV.fastq | fastq (reads) | reads | 391.5 MB | link | ||
| ENCFF558MQD | ENCFF558MQD.fastq | fastq (reads) | reads | 376.8 MB | link | ||
| ENCFF967YLZ | ENCFF967YLZ.fastq | fastq (reads) | reads | 439.2 MB | link | ||
| ENCFF157IWY | ENCFF157IWY.tsv | tsv (enrichment) | enrichment | 239.0 B | link | ||
| ENCFF497QML | ENCFF497QML.tsv | tsv (enrichment) | enrichment | 688.0 KB | link | ||
| ENCFF539CUI | ENCFF539CUI.tsv | tsv (enrichment) | enrichment | 462.0 B | link | ||
| ENCFF617KGP | ENCFF617KGP.tsv | tsv (enrichment) | enrichment | 166.1 KB | link | ||
| ENCFF718QMF | ENCFF718QMF.tsv | tsv (enrichment) | enrichment | 40.7 KB | link | ||
| ENCFF787TMW | ENCFF787TMW.tsv | tsv (enrichment) | enrichment | 10.0 KB | link | ||
| ENCFF303FLJ | ENCFF303FLJ.tsv | tsv (library fraction) | library fraction | 264.8 KB | link | ||
| ENCFF413EHO | ENCFF413EHO.tsv | tsv (library fraction) | library fraction | 64.3 KB | link | ||
| ENCFF679OPD | ENCFF679OPD.tsv | tsv (library fraction) | library fraction | 15.5 KB | link | ||
| ENCFF798MYY | ENCFF798MYY.tsv | tsv (library fraction) | library fraction | 1.1 MB | link |