ENCSR224KSF
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against RBMS3
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of RBMS3 in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against RBMS3
Analysis
View Data Processing
Analysis page is available for ENCSR224KSF.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 2.2 GBFiles: 12
Unique ENC file IDs: 12
File Formats
tsv (8)
fastq (4)
Output types (3)
enrichment (4)
library fraction (4)
reads (4)
Linked Publications (1)
Data Files (12)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF159XZR | ENCFF159XZR.fastq | fastq (reads) | reads | 334.5 MB | link | ||
| ENCFF270MEX | ENCFF270MEX.fastq | fastq (reads) | reads | 1.1 GB | link | ||
| ENCFF296APU | ENCFF296APU.fastq | fastq (reads) | reads | 385.4 MB | link | ||
| ENCFF815HRK | ENCFF815HRK.fastq | fastq (reads) | reads | 429.7 MB | link | ||
| ENCFF111GEB | ENCFF111GEB.tsv | tsv (enrichment) | enrichment | 576.0 KB | link | ||
| ENCFF491LXQ | ENCFF491LXQ.tsv | tsv (enrichment) | enrichment | 8.3 KB | link | ||
| ENCFF560ONY | ENCFF560ONY.tsv | tsv (enrichment) | enrichment | 140.0 KB | link | ||
| ENCFF615JNZ | ENCFF615JNZ.tsv | tsv (enrichment) | enrichment | 34.0 KB | link | ||
| ENCFF050HBK | ENCFF050HBK.tsv | tsv (library fraction) | library fraction | 217.6 KB | link | ||
| ENCFF160IZO | ENCFF160IZO.tsv | tsv (library fraction) | library fraction | 12.6 KB | link | ||
| ENCFF489KTM | ENCFF489KTM.tsv | tsv (library fraction) | library fraction | 888.4 KB | link | ||
| ENCFF885YQC | ENCFF885YQC.tsv | tsv (library fraction) | library fraction | 52.7 KB | link |