ENCSR905BJK
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against RBM4B
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of RBM4B in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against RBM4B
Analysis
View Data Processing
Analysis page is available for ENCSR905BJK.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 1.6 GBFiles: 12
Unique ENC file IDs: 12
File Formats
tsv (8)
fastq (4)
Output types (3)
enrichment (4)
library fraction (4)
reads (4)
Linked Publications (1)
Data Files (12)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF030UYE | ENCFF030UYE.fastq | fastq (reads) | reads | 339.2 MB | link | ||
| ENCFF414MZG | ENCFF414MZG.fastq | fastq (reads) | reads | 339.0 MB | link | ||
| ENCFF642LIU | ENCFF642LIU.fastq | fastq (reads) | reads | 545.8 MB | link | ||
| ENCFF933GYK | ENCFF933GYK.fastq | fastq (reads) | reads | 441.1 MB | link | ||
| ENCFF170CFD | ENCFF170CFD.tsv | tsv (enrichment) | enrichment | 8.3 KB | link | ||
| ENCFF324AVV | ENCFF324AVV.tsv | tsv (enrichment) | enrichment | 34.0 KB | link | ||
| ENCFF604EQA | ENCFF604EQA.tsv | tsv (enrichment) | enrichment | 576.0 KB | link | ||
| ENCFF723LYO | ENCFF723LYO.tsv | tsv (enrichment) | enrichment | 140.0 KB | link | ||
| ENCFF009TPD | ENCFF009TPD.tsv | tsv (library fraction) | library fraction | 52.2 KB | link | ||
| ENCFF471UTH | ENCFF471UTH.tsv | tsv (library fraction) | library fraction | 888.9 KB | link | ||
| ENCFF852LOZ | ENCFF852LOZ.tsv | tsv (library fraction) | library fraction | 12.3 KB | link | ||
| ENCFF999HWQ | ENCFF999HWQ.tsv | tsv (library fraction) | library fraction | 218.1 KB | link |