ENCSR929OLV
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against SRSF8
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of SRSF8 in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against SRSF8
Analysis
View Data Processing
Analysis page is available for ENCSR929OLV.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 1.7 GBFiles: 11
Unique ENC file IDs: 11
File Formats
tsv (6)
fastq (5)
Output types (3)
reads (5)
enrichment (3)
library fraction (3)
Linked Publications (1)
Data Files (11)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF046HXG | ENCFF046HXG.fastq | fastq (reads) | reads | 324.9 MB | link | ||
| ENCFF172SZM | ENCFF172SZM.fastq | fastq (reads) | reads | 414.1 MB | link | ||
| ENCFF260OIA | ENCFF260OIA.fastq | fastq (reads) | reads | 364.6 MB | link | ||
| ENCFF625PWF | ENCFF625PWF.fastq | fastq (reads) | reads | 300.4 MB | link | ||
| ENCFF746BQQ | ENCFF746BQQ.fastq | fastq (reads) | reads | 359.0 MB | link | ||
| ENCFF455VOQ | ENCFF455VOQ.tsv | tsv (enrichment) | enrichment | 208.0 KB | link | ||
| ENCFF504GWV | ENCFF504GWV.tsv | tsv (enrichment) | enrichment | 12.5 KB | link | ||
| ENCFF860CDY | ENCFF860CDY.tsv | tsv (enrichment) | enrichment | 51.0 KB | link | ||
| ENCFF156GSI | ENCFF156GSI.tsv | tsv (library fraction) | library fraction | 75.2 KB | link | ||
| ENCFF588RIK | ENCFF588RIK.tsv | tsv (library fraction) | library fraction | 17.9 KB | link | ||
| ENCFF894LGH | ENCFF894LGH.tsv | tsv (library fraction) | library fraction | 312.9 KB | link |