ENCSR915CDT
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against HNRNPCL1
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of HNRNPCL1 in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against HNRNPCL1
Analysis
View Data Processing
Analysis page is available for ENCSR915CDT.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 2.6 GBFiles: 14
Unique ENC file IDs: 14
File Formats
tsv (9)
fastq (5)
Output types (3)
enrichment (5)
reads (5)
library fraction (4)
Linked Publications (1)
Data Files (14)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF150PUV | ENCFF150PUV.fastq | fastq (reads) | reads | 467.2 MB | link | ||
| ENCFF316GAF | ENCFF316GAF.fastq | fastq (reads) | reads | 436.9 MB | link | ||
| ENCFF442IBY | ENCFF442IBY.fastq | fastq (reads) | reads | 518.0 MB | link | ||
| ENCFF729PSS | ENCFF729PSS.fastq | fastq (reads) | reads | 587.0 MB | link | ||
| ENCFF963SCO | ENCFF963SCO.fastq | fastq (reads) | reads | 643.1 MB | link | ||
| ENCFF015VSF | ENCFF015VSF.tsv | tsv (enrichment) | enrichment | 41.0 KB | link | ||
| ENCFF072KMO | ENCFF072KMO.tsv | tsv (enrichment) | enrichment | 319.0 B | link | ||
| ENCFF576WAA | ENCFF576WAA.tsv | tsv (enrichment) | enrichment | 168.0 KB | link | ||
| ENCFF732SOC | ENCFF732SOC.tsv | tsv (enrichment) | enrichment | 688.1 KB | link | ||
| ENCFF749DDH | ENCFF749DDH.tsv | tsv (enrichment) | enrichment | 10.0 KB | link | ||
| ENCFF063VPS | ENCFF063VPS.tsv | tsv (library fraction) | library fraction | 265.7 KB | link | ||
| ENCFF171EIR | ENCFF171EIR.tsv | tsv (library fraction) | library fraction | 1.1 MB | link | ||
| ENCFF820QTJ | ENCFF820QTJ.tsv | tsv (library fraction) | library fraction | 63.7 KB | link | ||
| ENCFF869NLN | ENCFF869NLN.tsv | tsv (library fraction) | library fraction | 15.1 KB | link |