ENCSR449VKY
ENCSR ENCODERNA Bind-n-Seq (RBNS) pulldown experiment against DAZ3
Experiment Types:
RNA Bind-n-Seq
Status:
released
Contact:
Chris Burge, MIT
Summary
RNA Bind-n-Seq of DAZ3 in
Overall Design
RNA Bind-n-Seq (RBNS) pulldown experiment against DAZ3
Analysis
View Data Processing
Analysis page is available for ENCSR449VKY.
Dataset Citations (1)
A large-scale binding and functional map of human RNA-binding proteins.
PMID 32728246
· 2020
· Nature
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
ENCODE Metadata
Total file size: 2.6 GBFiles: 16
Unique ENC file IDs: 16
File Formats
tsv (11)
fastq (5)
Output types (3)
enrichment (7)
reads (5)
library fraction (4)
Linked Publications (1)
Data Files (16)
| Accession | File Name | Stored Type | Output Type | Mapping Assembly | Size | Download | |
|---|---|---|---|---|---|---|---|
| ENCFF182ZXE | ENCFF182ZXE.fastq | fastq (reads) | reads | 696.8 MB | link | ||
| ENCFF463SEP | ENCFF463SEP.fastq | fastq (reads) | reads | 495.7 MB | link | ||
| ENCFF633VVB | ENCFF633VVB.fastq | fastq (reads) | reads | 486.8 MB | link | ||
| ENCFF756JHY | ENCFF756JHY.fastq | fastq (reads) | reads | 457.0 MB | link | ||
| ENCFF921PCX | ENCFF921PCX.fastq | fastq (reads) | reads | 474.0 MB | link | ||
| ENCFF167KBI | ENCFF167KBI.tsv | tsv (enrichment) | enrichment | 41.0 KB | link | ||
| ENCFF576NTR | ENCFF576NTR.tsv | tsv (enrichment) | enrichment | 10.0 KB | link | ||
| ENCFF610RRA | ENCFF610RRA.tsv | tsv (enrichment) | enrichment | 237.0 B | link | ||
| ENCFF620GLE | ENCFF620GLE.tsv | tsv (enrichment) | enrichment | 214.0 B | link | ||
| ENCFF662VJZ | ENCFF662VJZ.tsv | tsv (enrichment) | enrichment | 688.0 KB | link | ||
| ENCFF690SCB | ENCFF690SCB.tsv | tsv (enrichment) | enrichment | 168.0 KB | link | ||
| ENCFF881QIB | ENCFF881QIB.tsv | tsv (enrichment) | enrichment | 323.0 B | link | ||
| ENCFF363SSD | ENCFF363SSD.tsv | tsv (library fraction) | library fraction | 1.1 MB | link | ||
| ENCFF783PQH | ENCFF783PQH.tsv | tsv (library fraction) | library fraction | 64.2 KB | link | ||
| ENCFF803JOU | ENCFF803JOU.tsv | tsv (library fraction) | library fraction | 264.7 KB | link | ||
| ENCFF853YFD | ENCFF853YFD.tsv | tsv (library fraction) | library fraction | 15.4 KB | link |